DN135275

Overview
NameDN135275
Unique NameDN135275
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN135275_ssr626 microsatellite DN135275_ssr626:626..643. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6849 contig Csv1_Contig6849:246..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135275 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.413e-15
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 3
Query:  222 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSS-----GKFLRRFRLPDNAKVEQVKASMENGVLTV 494
            + A IDW E+  +H+FK ++PG            G +L I GE  KE++++N  WH  ER +      +FLRR  LP+N KV+QVKA +ENGVLTV
Sbjct:   20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTV 115          
BLAST of DN135275 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.111e-15
Identity = 51/125 (40.80%), Postives = 67/125 (53.60%), Query Frame = 3
Query:  138 LDVWDPFDGFLSSALTNAPSSA-----RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 497
            LDV D   G      T +  SA     R+    A    D KE P A+ F  D+PGL            R+L +SGER +E+ E + K+ R+ER  GKF+R+F LPDNA V++V A   +GVLTVT
Sbjct:   20 LDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVT 144          
BLAST of DN135275 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.562e-14
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 3
Query:  186 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 497
            NAP+    R+    A    D KE P ++VF  D+PG++            +L ISGER +E+E++  K+ ++ER  GK +R+F LP+NA +E + A  ++GVLTVT
Sbjct:   27 NAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVT 132          
BLAST of DN135275 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.481e-14
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 3
Query:  186 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 497
            + PS A  R+    A    D KE P ++VF  D+PGL+            +L ISG+R++E+E++  K+ R+ER  GKF+++F LP++A  +++ A  ++GVLTVT
Sbjct:   35 SGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVT 140          
BLAST of DN135275 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.481e-14
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 3
Query:  183 TNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSK----EQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 497
            T  P+ A  R+    A    D K+ P A+ F  D+PGL+           R+L ISGER +    E++E++ K+ R+ER  GKF+R+F LPDNA V+++ A  ++GVLTVT
Sbjct:   36 TGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVT 146          
BLAST of DN135275 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.937e-14
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 3
Query:  159 DGFLSSALTNAP--SSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 497
            DG   +   NAP  S  R+    A    D KE P ++VF+ D+PGL+            +L I GER +++E++  K+ R+ER  GK +R+F LP+NA  + + A  ++GVL+VT
Sbjct:   25 DGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVT 139          
BLAST of DN135275 vs. ExPASy Swiss-Prot
Match: SP21_STIAU (Spore protein SP21 OS=Stigmatella aurantiaca GN=hspA PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.013e-13
Identity = 47/135 (34.81%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  108 RRTNVFDPFS----LDVWDPFDGFLSSALTNAPSSARETSQFANA-RIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 497
            +RT  +DPF     L  WDPF+      L N P  A      A     + +ET +A++FKADLPG+            R+  +SG+R +E+ E++++++  ER+ G F R F LP+    + V+A ++NGVLT+T
Sbjct:   15 QRTREWDPFQQMQELMNWDPFE------LANHPWFANRQGPPAFVPAFEVRETKEAYIFKADLPGVDEKDIEVTLTGDRV-SVSGKREREKREESERFYAYERTFGSFSRAFTLPEGVDGDNVRADLKNGVLTLT 142          
BLAST of DN135275 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.727e-13
Identity = 45/111 (40.54%), Postives = 64/111 (57.66%), Query Frame = 3
Query:  174 SALTNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 497
            S+ ++APS     +    A    D KE P ++VF  D+PGL+            +L ISGER +E EEK   K+ R+ER  GK +R+F LP+NA  E++ A  ++GVLTVT
Sbjct:   25 SSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVT 135          
BLAST of DN135275 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 3
Query:  204 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 497
            R+    A    D KE P ++VF AD+PG++            +L +SGER++ ++++ D  K+ R+ER  GKF+R+F LP+NA VE + A  ++GVL VT
Sbjct:   48 RDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVT 147          
BLAST of DN135275 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.026e-13
Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 3
Query:  204 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 497
            R+    A    D KE   A+ F  D+PGL            R+L ISGER +E+ E + K+ R+ER  GKF+R+F LPDNA V++V A   +GVLTVT
Sbjct:   38 RDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREERE-DAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVT 134          
The following BLAST results are available for this feature:
BLAST of DN135275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HS157_ARATH1.413e-1543.7515.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP22_MAIZE4.111e-1540.8017.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_PEA1.562e-1438.6817.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_HELAN3.481e-1437.7417.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP18_ORYSJ3.481e-1440.5418.0 kDa class II heat shock protein OS=Oryza sati... [more]
HSP21_SOYBN5.937e-1436.5217.9 kDa class II heat shock protein OS=Glycine ma... [more]
SP21_STIAU1.013e-1334.81Spore protein SP21 OS=Stigmatella aurantiaca GN=hs... [more]
HSP21_IPONI1.727e-1340.5417.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP22_IPONI2.256e-1339.0018.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP23_MAIZE5.026e-1343.8817.0 kDa class II heat shock protein OS=Zea mays G... [more]

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Properties
Property NameValue
Genbank descriptionwca08h08 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08h08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135275 ID=DN135275; Name=DN135275; organism=Citrus sinensis; type=EST; length=684bp
CGGCCGGGATCTTCGAATTGATTGATCAAACACTTCTGAAGTTGTTGAGC
ATTTAATTAGCGCCCCAGTTTGCCATAATGTCACTCATTCCAAGCATCTT
CGGTGGCCGAAGAACCAACGTGTTCGATCCATTTTCATTAGATGTATGGG
ATCCTTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGCCGTCTTCG
GCTAGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGGAAAGAGAC
TCCTCAGGCTCATGTATTCAAGGCTGATCTTCCAGGGCTGAGGAAAGAAG
AAGTGAAAGTTGAGGTTGAAGAGGGCAGGATTCTGCAGATAAGCGGGGAG
AGGAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGCGTCGAGAG
GAGCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAATGCTAAGG
TGGAGCAGGTTAAGGCCAGCATGGAGAATGGTGTGCTCACAGTGACCGTT
CCTAAACAGGAGGAGAAGAAACCTGAAGTTAAGGCCATTGAGATCTCTGG
CTAAGTGATAAGTGTAAATGTTTTCAAGATTGTGTCTTTGGTTTGCTAAT
AAATTTGGTACGAAAGCAAAGCCCTTGTGTGTGTGTGTGTGTGCTTGCAA
GAGCTTCCCTTCCCCCCCTGTTTAATTCGATGTG
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