DN135274

Overview
NameDN135274
Unique NameDN135274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13572 contig Csv1_Contig13572:1203..1903. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_ANASK (Threonyl-tRNA synthetase OS=Anaeromyxobacter sp. (strain K) GN=thrS PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.518e-60
Identity = 117/225 (52.00%), Postives = 154/225 (68.44%), Query Frame = 2
Query:   26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700
            RSYRELP+R      LHRNEASG+L GLTRVR+F+QDDAHI+ RE Q+ DEV  + E +   Y  FG  +E   STRPE+ +GD A W++AEA L ++L+  G  W +N GDGAFYGPKID+ V+D+L RK+Q  T+QLD+  P+RF+L +  ED  K  RPV+IHRAI GS ER  AIL+EHY G +P WL+P QA V  VS   + +A +  + +   G+ V+
Sbjct:  361 RSYRELPVRYFTTDALHRNEASGSLGGLTRVRQFEQDDAHIYLREEQVTDEVLRIFELMKVVYGAFGLGFEATFSTRPEQRIGDDALWDRAEALLRKSLDATGLKWTLNAGDGAFYGPKIDMLVTDSLGRKWQTCTIQLDYAAPERFDLTFVGEDN-KEHRPVVIHRAIYGSFERFVAILVEHYAGAFPAWLAPVQARVVTVSDRFEAWAREAGEALQARGWRVE 584          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_ANAD2 (Threonyl-tRNA synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=thrS PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.518e-60
Identity = 117/225 (52.00%), Postives = 154/225 (68.44%), Query Frame = 2
Query:   26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700
            RSYRELP+R      LHRNEASG+L GLTRVR+F+QDDAHI+ RE Q+ DEV  + E +   Y  FG  +E   STRPE+ +GD A W++AEA L ++L+  G  W +N GDGAFYGPKID+ V+D+L RK+Q  T+QLD+  P+RF+L +  ED  K  RPV+IHRAI GS ER  AIL+EHY G +P WL+P QA V  VS   + +A +  + +   G+ V+
Sbjct:  361 RSYRELPVRYFTTDALHRNEASGSLGGLTRVRQFEQDDAHIYLREEQVTDEVLRIFELMKVVYGAFGLGFEATFSTRPEQRIGDDALWDRAEALLRKSLDATGLKWTLNAGDGAFYGPKIDMLVTDSLGRKWQTCTIQLDYAAPERFDLTFVGEDN-KEHRPVVIHRAIYGSFERFVAILVEHYAGAFPAWLAPVQARVVTVSDRFEAWAREAGEALQARGWRVE 584          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_THELT (Threonyl-tRNA synthetase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=thrS PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.589e-60
Identity = 113/223 (50.67%), Postives = 150/223 (67.26%), Query Frame = 2
Query:   29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697
            SYR+LP+R  +FG +HR E SG L GL RVR F QDDAHIFCR  Q+++E+ GV+  +   Y  FGF Y  +LST PE ++GD ATWEKA  AL +A+   G  + + E +GAFYGPKID  V D++ R +QCAT+QLDF +P RF L Y++ D  K ++PVMIHRAI GS+ER   IL+EHY G +P WL+P Q I+ P++     YA +V+    + G  V
Sbjct:  344 SYRDLPVRFFEFGKVHRYERSGVLHGLFRVRSFTQDDAHIFCRIDQVENEIAGVINLVHRIYSQFGFDYSAELSTMPEDHMGDEATWEKATEALRKAMESVGLQYVVKEKEGAFYGPKIDFHVRDSIGRTWQCATIQLDFLMPQRFGLVYTSMD-GKYQQPVMIHRAIYGSLERFLGILIEHYAGAFPTWLAPVQVIIIPIADRHFEYAEKVKSEFVKNGVRV 565          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PETMO (Threonyl-tRNA synthetase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=thrS PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.589e-60
Identity = 109/202 (53.96%), Postives = 154/202 (76.24%), Query Frame = 2
Query:   29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS 634
            SYR+LP+R+ +FG +HR E SG L GL RVR F QDDAHIFC  SQ+++E+  V++  +  +  FGF YE  LST PE ++GD+ +WE+A  AL +AL +    ++I+EG+GAFYGPKID +V+D+L RK+QC T+QLDFQ+P+RF++ Y+ E++A+ +RPVMIHRAI GS+ER F IL+E++ G++P WLSP Q  + PVS
Sbjct:  347 SYRDLPIRMFEFGKVHRYERSGVLHGLFRVRAFTQDDAHIFCMPSQMEEEIIKVIQLTNEIFSTFGFKYEAILSTMPEDHMGDIESWERATDALKKALEKSNMEYRIDEGEGAFYGPKIDFNVTDSLGRKWQCTTIQLDFQMPERFDMVYADENDAQ-KRPVMIHRAIFGSLERFFGILIENFAGEFPTWLSPVQVSILPVS 547          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_ACIF5 (Threonyl-tRNA synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=thrS PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.589e-60
Identity = 114/224 (50.89%), Postives = 153/224 (68.30%), Query Frame = 2
Query:   20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688
            K+ SYR+LP+R A+ G ++R+E SGAL GL RVR F QDDAH+FCR  QI+ E+  VL  +      FGF  YE+ LSTRP   +G    W+ A  AL  AL   G  +Q++ G GAFYGPKID+ + DA+ RK+QC+T+QLDF LP+RF + Y AED A+ + P+M+HRAI GS+ER F +L+EHY+GK+P WL+P QA+V P+S     YA  V D + + G
Sbjct:  345 KLHSYRDLPIRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHVFCRPDQIEAEIGAVLVLVRKILGTFGFDQYEINLSTRPGHSVGSDEIWDAATQALRNALERAGLEYQVDAGGGAFYGPKIDLKIQDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGAR-KVPIMVHRAIFGSIERFFGVLIEHYEGKFPVWLAPVQAVVLPISEHYSEYAESVSDVLVKRG 567          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_ACIF2 (Threonyl-tRNA synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=thrS PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.589e-60
Identity = 114/224 (50.89%), Postives = 153/224 (68.30%), Query Frame = 2
Query:   20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688
            K+ SYR+LP+R A+ G ++R+E SGAL GL RVR F QDDAH+FCR  QI+ E+  VL  +      FGF  YE+ LSTRP   +G    W+ A  AL  AL   G  +Q++ G GAFYGPKID+ + DA+ RK+QC+T+QLDF LP+RF + Y AED A+ + P+M+HRAI GS+ER F +L+EHY+GK+P WL+P QA+V P+S     YA  V D + + G
Sbjct:  345 KLHSYRDLPIRWAELGTVYRHEMSGALHGLMRVRGFTQDDAHVFCRPDQIEAEIGAVLVLVRKILGTFGFDQYEINLSTRPGHSVGSDEIWDAATQALRNALERAGLEYQVDAGGGAFYGPKIDLKIQDAIGRKWQCSTVQLDFNLPERFAMEYVAEDGAR-KVPIMVHRAIFGSIERFFGVLIEHYEGKFPVWLAPVQAVVLPISEHYSEYAESVSDVLVKRG 567          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_NITEC (Threonyl-tRNA synthetase OS=Nitrosomonas eutropha (strain C91) GN=thrS PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.382e-60
Identity = 116/219 (52.97%), Postives = 149/219 (68.04%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYEL-KLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHI 676
            +RSYR+LPLRLA+FG  HRNEASGAL GL RVR F QDDAHIFC E Q+ +EV   ++ ++  Y  FGF   L KLSTRP + +G    W++AEAAL  ALN+    W++  G+GAFYGPKI+ ++ D+L RK+QC TLQLDF +P R   GY AED  K + PVM+HRAILGS+ER   IL+EH+ G  P WLSP Q +V  +S     Y   + + +
Sbjct:  344 LRSYRDLPLRLAEFGSCHRNEASGALHGLMRVRSFTQDDAHIFCTEDQVLEEVTKFIDLLNQVYIDFGFHENLIKLSTRPAQRVGTEEQWDRAEAALAAALNQKELNWELQPGEGAFYGPKIEFTLKDSLGRKWQCGTLQLDFSMPARLGAGYIAEDNTK-KIPVMLHRAILGSMERFIGILIEHHAGALPVWLSPDQVVVLNISRNQADYVQSITNEL 561          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_CAMC5 (Threonyl-tRNA synthetase OS=Campylobacter curvus (strain 525.92) GN=thrS PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.382e-60
Identity = 110/215 (51.16%), Postives = 153/215 (71.16%), Query Frame = 2
Query:   20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQV 664
            ++RSYR+LPL+  ++GV+HR+E SG L GL RVR F QDD+HIFC  SQIK  +  +L F     + FGF YE+++ST+P K +G    W+ A  AL EAL+E G  + I+EG GAFYGPKIDI ++DALKRK+QC T+Q+DF LP+RF+LGY  +   + +RPVM+HRA+LGS ER   IL+EH  G+ PF+++P Q ++ P+S     YA ++
Sbjct:  314 EIRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFAQDDSHIFCMPSQIKQNILEILSFAGKIMQNFGFEYEMEISTKPAKAIGSDEIWDIATNALKEALDENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLGY-IDANNERQRPVMLHRALLGSFERFIGILIEHTAGELPFFIAPTQVVIVPISDAHLDYAKEI 527          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSEU5 (Threonyl-tRNA synthetase OS=Pseudomonas stutzeri (strain A1501) GN=thrS PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.417e-60
Identity = 111/224 (49.55%), Postives = 152/224 (67.86%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691
            ++SYR+LPLR+A+FG  HRNE SGAL G+ RVR F QDDAHIFC E Q+K E    ++     Y  FGF+   +KLSTRP K +G    W++AE AL EALNE G  W+   G+GAFYGPKI+ ++ D L R +QC TLQ D  LP+R +  Y AED ++ +RPVM+HRAILGS ER   +L+EHY G +P WL+P QA++  ++     +A++V   + ++G+
Sbjct:  344 LKSYRDLPLRMAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEEQVKKEAADFIKLTLKVYADFGFSDIAMKLSTRPAKRVGSDELWDRAEGALAEALNESGLAWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYVAEDNSR-QRPVMLHRAILGSFERFIGMLIEHYAGAFPAWLAPTQAVIMNITDKQAAFAIEVEKTLVQSGF 566          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSESM (Threonyl-tRNA synthetase OS=Pseudomonas syringae pv. tomato GN=thrS PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.417e-60
Identity = 115/224 (51.34%), Postives = 153/224 (68.30%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691
            ++SYRELPLRLA+FG  HRNE SGAL G+ RVR F QDDAHIFC E Q++ E    ++     Y  FGF   ELKLSTRPEK +G    W++AE+AL  AL+  G P+ +  G+GAFYGPKI+ S+ D L R +QC TLQLDF LP R +  Y +ED ++ + PVM+HRAILGS ER   IL+EHY+G +P WL+P QA++  ++     +AL+V   +  +G+
Sbjct:  344 LKSYRELPLRLAEFGACHRNEPSGALHGIMRVRGFTQDDAHIFCTEDQMQAESAAFIKLTLDVYADFGFKDIELKLSTRPEKRVGSDELWDRAESALASALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPIRLSAEYVSEDNSR-KNPVMLHRAILGSFERFIGILIEHYEGAFPAWLAPTQAVIMNITDKQADFALEVEKTLAESGF 566          
The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SYT_ANASK1.518e-6052.00Threonyl-tRNA synthetase OS=Anaeromyxobacter sp. (... [more]
SYT_ANAD21.518e-6052.00Threonyl-tRNA synthetase OS=Anaeromyxobacter dehal... [more]
SYT_THELT2.589e-6050.67Threonyl-tRNA synthetase OS=Thermotoga lettingae (... [more]
SYT_PETMO2.589e-6053.96Threonyl-tRNA synthetase OS=Petrotoga mobilis (str... [more]
SYT_ACIF52.589e-6050.89Threonyl-tRNA synthetase OS=Acidithiobacillus ferr... [more]
SYT_ACIF22.589e-6050.89Threonyl-tRNA synthetase OS=Acidithiobacillus ferr... [more]
SYT_NITEC3.382e-6052.97Threonyl-tRNA synthetase OS=Nitrosomonas eutropha ... [more]
SYT_CAMC53.382e-6051.16Threonyl-tRNA synthetase OS=Campylobacter curvus (... [more]
SYT_PSEU54.417e-6049.55Threonyl-tRNA synthetase OS=Pseudomonas stutzeri (... [more]
SYT_PSESM4.417e-6051.34Threonyl-tRNA synthetase OS=Pseudomonas syringae p... [more]

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Properties
Property NameValue
Genbank descriptionwca08h07 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08h07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bp
TACGGCCGGGGTTTGNNNTAAGGTTCGTTCATACAGAGAACTACCTCTGC
GACTGGCTGATTTTGGGGTCTTGCATCGGAATGAAGCCAGTGGAGCACTC
ACTGGATTAACTCGTGTCAGGAGATTTCAGCAGGATGACGCTCATATTTT
CTGCAGGGAGTCCCAGATAAAAGACGAAGTAAGGGGTGTCCTAGAGTTCA
TTGATTATGCCTACAGAATATTCGGGTTCACATATGAGCTGAAGCTATCA
ACTAGGCCTGAAAAGTATCTTGGGGACTTGGCAACTTGGGAGAAAGCCGA
AGCTGCTCTTACAGAAGCATTGAATGAGTTTGGGAAGCCATGGCAGATAA
ATGAAGGGGATGGAGCATTTTATGGACCAAAGATTGATATCAGTGTATCT
GATGCATTGAAGAGGAAATTCCAGTGTGCTACTTTGCAGCTTGACTTTCA
GCTTCCTGATCGTTTCAACTTGGGTTACTCAGCGGAAGATGAAGCCAAGA
CAGAGAGACCTGTTATGATACACAGAGCGATATTGGGGTCTGTTGAACGT
ATGTTTGCTATACTGTTGGAACATTACAAGGGGAAGTGGCCTTTTTGGCT
CAGTCCACGTCAAGCAATTGTTTGCCCTGTGTCNNNGNAATCCCAACCAT
ATGCTTTACAGGTGCGGGATCATATTTATCGAGCCGGTTATTATGTTGAT
G
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