DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.497e-40
Identity = 76/91 (83.52%), Postives = 85/91 (93.41%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACLEQDPESKVACETC KTNMVMVFGEITTKA VDY+++VR TCR IGFVSADVGLDAD CKVLVNIE+QSP+IAQ VHG+L+K+PEE+G
Sbjct:   29 DACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVG 119          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 4.497e-40
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACLEQDP+SKVACETC KTNMVMVFGEITTKA VDY+K+VRDTCR IGFVS DVGLDADKCKVLVNIE+QSP+IAQ VHG+ +K PEEIG
Sbjct:   29 DACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIG 119          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 5.873e-40
Identity = 76/91 (83.52%), Postives = 84/91 (92.31%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL +DPESKVACETC KTNMVMVFGEITTKA VDY+K+VRDTCRGIGFVS DVGLDA+ CKVLVNIE+QSP+IAQ VHG+ +KRPEEIG
Sbjct:   32 DACLAEDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFVSNDVGLDAEHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 122          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 5.873e-40
Identity = 76/91 (83.52%), Postives = 84/91 (92.31%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL QDP+SKVACETC+KTNMVMVFGEITTKA VDY+K+VRDTCR IGFVS DVGLDAD CKVLVNIE+QSP+IAQ VHG+ +KRPEEIG
Sbjct:   29 DACLAQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 119          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.670e-40
Identity = 76/91 (83.52%), Postives = 84/91 (92.31%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL QDP+SKVACETC KTNMVMVFGEITTKA +DY+K+VRDTCR IGFVS DVGLDAD CKVLVNIE+QSP+IAQ VHG+L+KRPEEIG
Sbjct:   29 DACLAQDPDSKVACETCTKTNMVMVFGEITTKADIDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.670e-40
Identity = 76/91 (83.52%), Postives = 84/91 (92.31%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL QDPESKVACETC KTN+VMVFGEITTKA VDY+K+VR TCR IGFVSADVGLDAD CKVLVNIE+QSP+IAQ VHG+L++RPEEIG
Sbjct:   33 DACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTRRPEEIG 123          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.670e-40
Identity = 75/91 (82.42%), Postives = 86/91 (94.51%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL+QDPESKVACE+C KTNMVMVFGEITTKA+V+Y+K+VRDTCRGIGF S DVGLDAD CKVLVNIE+QSP+IAQ VHG+L+K+PEEIG
Sbjct:   29 DACLKQDPESKVACESCTKTNMVMVFGEITTKAQVNYEKIVRDTCRGIGFTSPDVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKKPEEIG 119          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.002e-39
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACLEQDPESKVACETC KTN+VMVFGEITTKA VDY+K+VRDTCR IGFVS DVGLDAD CKVLV IE+QSP+IAQ VHG+L+KRPEEIG
Sbjct:   29 DACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.002e-39
Identity = 77/91 (84.62%), Postives = 84/91 (92.31%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACLEQD +SKVACETC KTNMVMVFGEITTKA VDY+K+VRDTCR IGFVS DVGLDAD CKVLVNIE+QSP+IAQ VHG+L+KRPEEIG
Sbjct:   29 DACLEQDQDSKVACETCTKTNMVMVFGEITTKAAVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIG 119          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.002e-39
Identity = 75/91 (82.42%), Postives = 84/91 (92.31%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL QDPESKVACETC KTN+VMVFGEITTKA +DY+K+VRDTCR IGFVS DVGLDAD C+VLVNIE+QSP+IAQ VHG+L+KRPEEIG
Sbjct:   29 DACLAQDPESKVACETCTKTNLVMVFGEITTKANIDYEKIVRDTCREIGFVSPDVGLDADNCRVLVNIEQQSPDIAQGVHGHLTKRPEEIG 119          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_ARATH4.497e-4083.52S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK1_ARATH4.497e-4084.62S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK3_ORYSJ5.873e-4083.52S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK1_ELAUM5.873e-4083.52S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK5_VITVI7.670e-4083.52S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK3_ATRNU7.670e-4083.52S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK1_ACTCH7.670e-4082.42S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK_SOLBR1.002e-3984.62S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK_CAMSI1.002e-3984.62S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK2_SOLLC1.002e-3982.42S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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