DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ROSCS (S-adenosylmethionine synthetase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.229e-14
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEIT-TKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPE 265
            DA L  DP ++VACET   T +++V GE+T  +  +  +++VR T + IG+  A  G DAD C V+V I  QSP+IAQ V+  L  R +
Sbjct:   36 DAFLSHDPRARVACETATTTGLIVVIGEVTYEQGYIPIEEIVRKTIKDIGYTDAAYGFDADTCGVMVAIHGQSPDIAQGVNRALEVRSD 124          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_MOOTA (S-adenosylmethionine synthetase OS=Moorella thermoacetica (strain ATCC 39073) GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.229e-14
Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEE 268
            DA   +D +++VACE    T +++V G+ITT   VD  +V R+T R IG+  A  G D D C V+ +I++QSP+IA  V+    K+  E
Sbjct:   29 DAIYAKDNQARVACECLVSTGLILVAGQITTDCYVDIPRVARETVREIGYTRAKFGFDCDTCAVITSIDEQSPDIAMGVNEAWEKKQGE 117          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_METCA (S-adenosylmethionine synthetase OS=Methylococcus capsulatus GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.229e-14
Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QDP+++VA ET  KT MV++ GE+TT A VD +++VR     IG+ + ++G D   C VL  I KQSP+IA  V
Sbjct:   30 DAILAQDPKARVAVETLVKTGMVVLAGEVTTSAWVDTEELVRKVVHEIGYDNPEIGFDWQSCAVLTAIGKQSPDIAMGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_CHRVO (S-adenosylmethionine synthetase OS=Chromobacterium violaceum GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.229e-14
Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVH 241
            DA L +D  ++VA ET   T +V++ GEITT A VDY K+ R+T + IG+  +++G D   C V+   +KQSP+IAQ V+
Sbjct:   29 DAILREDKHARVAAETLVNTGLVVLAGEITTTANVDYIKIARETIKRIGYDDSELGFDFRGCAVMACYDKQSPDIAQGVN 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ANAVT (S-adenosylmethionine synthetase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.229e-14
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEE 268
            D  L QDP S+VA E    T +V++ GEITTKA V+Y  + R     IG+ +AD G  A    V+V +++QSP+IAQ V+     R ++
Sbjct:   30 DTLLTQDPTSRVAAEVVVNTGLVLITGEITTKANVNYANIARQKIAEIGYTNADNGFSASSTSVIVALDEQSPDIAQGVNTAQETREQD 118          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SYNJA (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain JA-3-3Ab) GN=metK PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.442e-14
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEE 268
            DA L  DP S+VA E    T MV++ GEIT++A V++ ++VRD    IG+  A  G  A+ C VLV  ++QSP+IAQ V+  L  R  +
Sbjct:   25 DALLTADPLSRVAAEVVVNTGMVILTGEITSQAHVNFTRLVRDKVAEIGYTDAKNGFSAESCAVLVAFDEQSPDIAQGVNLALESRTSQ 113          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PSEPF (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf0-1) GN=metK PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.442e-14
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA + QD  ++VA ET  KT + +V GE+TT A VD +++VRD    IG+ S+DVG D   C V+  I KQSP+I Q V      +PE+ G
Sbjct:   30 DAIIAQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQG 117          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PSEF5 (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metK PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.442e-14
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA + QD  ++VA ET  KT + +V GE+TT A VD +++VRD    IG+ S+DVG D   C V+  I KQSP+I Q V      +PE+ G
Sbjct:   30 DAIIAQDKHARVAVETLVKTGVAIVAGEVTTSAWVDLEQIVRDVICDIGYTSSDVGFDGATCGVMNIIGKQSPDINQGVD---RAKPEDQG 117          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_MANSM (S-adenosylmethionine synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=metK PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.442e-14
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            D  L+QDP+++VACET  KT M +V GEITT A VD + + R     IG+ S+++G D   C VL  I KQS +I Q V
Sbjct:   29 DEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIEYIARQVICDIGYTSSEMGFDGHSCAVLNGIGKQSSDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ROSS1 (S-adenosylmethionine synthetase OS=Roseiflexus sp. (strain RS-1) GN=metK PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.233e-13
Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEIT-TKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            DA L  DP ++VACET   T +++V GE+T  +  +  +++VR T + IG+  A  G DAD C V+V I  QSP+IAQ V   L  R
Sbjct:   36 DAFLTHDPRARVACETATTTGLIVVIGEVTYEQGYIPIEEIVRKTVKDIGYTDASYGFDADTCGVMVAIHGQSPDIAQGVDRALEVR 122          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ROSCS7.229e-1442.70S-adenosylmethionine synthetase OS=Roseiflexus cas... [more]
METK_MOOTA7.229e-1440.45S-adenosylmethionine synthetase OS=Moorella thermo... [more]
METK_METCA7.229e-1448.10S-adenosylmethionine synthetase OS=Methylococcus c... [more]
METK_CHRVO7.229e-1445.00S-adenosylmethionine synthetase OS=Chromobacterium... [more]
METK_ANAVT7.229e-1441.57S-adenosylmethionine synthetase OS=Anabaena variab... [more]
METK_SYNJA9.442e-1443.82S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_PSEPF9.442e-1445.05S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_PSEF59.442e-1445.05S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_MANSM9.442e-1448.10S-adenosylmethionine synthetase OS=Mannheimia succ... [more]
METK_ROSS11.233e-1343.68S-adenosylmethionine synthetase OS=Roseiflexus sp.... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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