DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 2.915e-39
Identity = 76/91 (83.52%), Postives = 83/91 (91.21%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL QDPESKVACETC KTN+VMVFGEITTKA VDY+K+VR TCR IGFVSADVGLDAD CKVLV IE+QSP+IAQ VHG+LS+RPEEIG
Sbjct:   33 DACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIG 123          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.807e-39
Identity = 75/91 (82.42%), Postives = 84/91 (92.31%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACLEQDP+SKVACETC+KTNMVMVFGEITTKA VDY+K+VR TCR IGFVS DVGLDAD CKVLV IE+QSP+IAQ VHG+L+KRPE+IG
Sbjct:   29 DACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIG 119          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.807e-39
Identity = 76/91 (83.52%), Postives = 83/91 (91.21%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL QDPESKVACETC KTN+VMVFGEITTKA VDY+K+VR TCR IGFVSADVGLDAD CKVLV IE+QSP+IAQ VHG+LS+RPEEIG
Sbjct:   33 DACLAQDPESKVACETCTKTNLVMVFGEITTKADVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIG 123          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 4.972e-39
Identity = 74/91 (81.32%), Postives = 84/91 (92.31%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACLEQD +SKVACETC KTN+VMVFGEITTKA VDY+K+VR+TCR IGFVSADVGLDAD CKVLVNIE+QSP+IAQ VHG+ +K+PEEIG
Sbjct:    4 DACLEQDSDSKVACETCTKTNLVMVFGEITTKANVDYEKIVRNTCRNIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKKPEEIG 94          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 6.493e-39
Identity = 75/91 (82.42%), Postives = 83/91 (91.21%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL QDPESKVACETC KTN+VMVFGEITTKA VDY+K+VR TCR IGFVSADVGLDAD CKVLV IE+QSP+IAQ VHG+L++RPEEIG
Sbjct:   33 DACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTRRPEEIG 123          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 8.480e-39
Identity = 75/91 (82.42%), Postives = 82/91 (90.11%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL QDPESKVACETC KTN+VMVFGEITTK  VDY+K+VR TCR IGFVSADVGLDAD CKVLV IE+QSP+IAQ VHG+L+KRPEEIG
Sbjct:   33 DACLAQDPESKVACETCTKTNLVMVFGEITTKGNVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIG 123          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.108e-38
Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL QDP+SKVACETC +TNMVMVFGEITTKA VDY+++VRDTCR IGF S DVGLDAD CKVLVNIE+QSP+IAQ VHG+L+K+PEEIG
Sbjct:   29 DACLAQDPDSKVACETCTRTNMVMVFGEITTKANVDYEQIVRDTCRSIGFTSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIG 119          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.447e-38
Identity = 73/91 (80.22%), Postives = 83/91 (91.21%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL QD +SKVACETC KTNMVMVFGEITTKA VDY+K+VRDTCR IGF+S DVGLDAD+CKVLVNIE+QSP+IAQ VHG+ +KRPE+IG
Sbjct:   31 DACLAQDADSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRNIGFISDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEDIG 121          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.447e-38
Identity = 74/91 (81.32%), Postives = 83/91 (91.21%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACLEQDP+SKVACETC+KTNMVMVFGEITTKA VDY+K+V  TCR IGFVS DVGLDAD CKVLV IE+QSP+IAQ VHG+L+KRPE+IG
Sbjct:   29 DACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVHKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIG 119          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 5.497e-38
Identity = 73/91 (80.22%), Postives = 82/91 (90.11%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DACL QDP+SKVACETC KTNMVMVFGEITTKA VDY+++VR TCR IGF+S DVGLDAD CKVLVNIE+QSP+IAQ VHG+ +KRPEEIG
Sbjct:   29 DACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEQIVRKTCREIGFISDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIG 119          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_ATRNU2.915e-3983.52S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK2_DAUCA3.807e-3982.42S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK2_ATRNU3.807e-3983.52S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_PEA4.972e-3981.32S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]
METK4_ATRNU6.493e-3982.42S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK1_BETVU8.480e-3982.42S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK_LITCN1.108e-3880.22S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK1_TRIMO1.447e-3880.22S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK1_DAUCA1.447e-3881.32S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK_PINBN5.497e-3880.22S-adenosylmethionine synthetase OS=Pinus banksiana... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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