DN135029

Overview
NameDN135029
Unique NameDN135029
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:448..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135029 vs. ExPASy Swiss-Prot
Match: HUB1_DEBHA (Ubiquitin-like modifier HUB1 OS=Debaryomyces hansenii GN=HUB1 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.328e-22
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1
Query:   58 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 276
            MIEV+ NDRLGKK++VKC   DTIGDLKK+++ Q GT  +KI ++K Y +YKDHITL DYE+H+G   ELYYS
Sbjct:    1 MIEVLANDRLGKKIKVKCMPTDTIGDLKKIISLQIGTSYEKIVLKKGYQVYKDHITLDDYEVHNGFNFELYYS 73          
BLAST of DN135029 vs. ExPASy Swiss-Prot
Match: HUB1_CANGA (Ubiquitin-like modifier HUB1 OS=Candida glabrata GN=HUB1 PE=4 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.750e-21
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1
Query:   58 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYS 276
            MIEV++NDRLGKK+RVKC EDDT+GD KK+++ Q G +  KI +QK  ++ KDHITL DYE+HD   LELYYS
Sbjct:    1 MIEVLVNDRLGKKIRVKCLEDDTVGDFKKVLSVQLGMQPSKIVLQKGGSVLKDHITLYDYEVHDNTNLELYYS 73          
BLAST of DN135029 vs. ExPASy Swiss-Prot
Match: HUB1_YEAST (Ubiquitin-like modifier HUB1 OS=Saccharomyces cerevisiae GN=HUB1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 8.958e-20
Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 1
Query:   58 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 273
            MIEVV+NDRLGKKVRVKC  +D++GD KK+++ Q GT+ +KI +QK  ++ KDHI+L+DYE+HD   LELYY
Sbjct:    1 MIEVVVNDRLGKKVRVKCLAEDSVGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDYEVHDQTNLELYY 72          
BLAST of DN135029 vs. ExPASy Swiss-Prot
Match: HUB1_KLULA (Ubiquitin-like modifier HUB1 OS=Kluyveromyces lactis GN=HUB1 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.958e-20
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1
Query:   58 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGT-RADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 273
            MIEV++NDRLGKKV VKC  +DT+GD KK+++ Q GT  A KI +QK  ++ KDHITL+DYE+HDG  LELYY
Sbjct:    1 MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLEDYEVHDGTNLELYY 73          
BLAST of DN135029 vs. ExPASy Swiss-Prot
Match: UBL5_DICDI (Ubiquitin-like protein 5 OS=Dictyostelium discoideum GN=ubl5 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.446e-19
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 1
Query:   58 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKD--------------YEIHDGMGLELYYS 276
            MIEVV NDRLG KVRVK N DDTIGDLKK+++AQ G +A+KIR+QK Y+I+KD     +              YEIHDG GLELYY+
Sbjct:    1 MIEVVCNDRLGNKVRVKVNSDDTIGDLKKVLSAQIGIKAEKIRLQKSYSIFKDRNNNNNYNNYNNNNNNYYYYYEIHDGDGLELYYN 87          
BLAST of DN135029 vs. ExPASy Swiss-Prot
Match: HUB1_ASHGO (Ubiquitin-like modifier HUB1 OS=Ashbya gossypii GN=HUB1 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.764e-18
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 1
Query:   58 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY 273
            MIEV++NDRLGKK+RVKC   D++GDLKK++A Q GT   K+ + K     KDHI+L DYE+HDG  LELYY
Sbjct:    1 MIEVIVNDRLGKKLRVKCLSTDSVGDLKKVLAVQLGTAHGKVALHKGGVNLKDHISLDDYEVHDGTYLELYY 72          
The following BLAST results are available for this feature:
BLAST of DN135029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
HUB1_DEBHA7.328e-2263.01Ubiquitin-like modifier HUB1 OS=Debaryomyces hanse... [more]
HUB1_CANGA4.750e-2163.01Ubiquitin-like modifier HUB1 OS=Candida glabrata G... [more]
HUB1_YEAST8.958e-2061.11Ubiquitin-like modifier HUB1 OS=Saccharomyces cere... [more]
HUB1_KLULA8.958e-2063.01Ubiquitin-like modifier HUB1 OS=Kluyveromyces lact... [more]
UBL5_DICDI4.446e-1957.47Ubiquitin-like protein 5 OS=Dictyostelium discoide... [more]
HUB1_ASHGO3.764e-1859.72Ubiquitin-like modifier HUB1 OS=Ashbya gossypii GN... [more]

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Properties
Property NameValue
Genbank descriptionwca05b07 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone wca05b07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135029 ID=DN135029; Name=DN135029; organism=Citrus sinensis; type=EST; length=581bp
GGGGAAACGANNNANNNNNAAATCATTCGGCAGGGAAAATCAAAACAGGA
GACAAAGATGATTGAGGTGGTGCTGAACGACAGGCTCGGGAAGAAGGTGC
GCGTGAAGTGCAACGAAGACGACACCATAGGCGACTTGAAGAAGCTGGTG
GCGGCTCAGACCGGGACTCGAGCCGACAAGATTCGGATTCAGAAGTGGTA
CAACATCTACAAGGACCACATCACTCTCAAGGACTACGAGATTCACGACG
GCATGGGCCTTGAACTCTATTACAGCTAAATCCACCGTTAAATATATATG
CTGCTGCAAGCAGTCAATACTACTAGGAACCATATGCTATAATAAGCAAG
GGGTATTGGAAGATGCGGCAGGGCCAACTTTACTAATACTGTCTTGTAAG
AAAAAAATTTGTGAAGACTCGTAAAAACTTATTTGTGGTTATGTAACATA
TCTGGGATCTGGACTTACTCTCCATTTTGAATGGTGTTTAGATCTTTATC
AAGGTATTGAGGTACCACATGCTTGTCAGTCCATTAGGCTGATAGAATTT
TTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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