CN186014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186014 vs. ExPASy Swiss-Prot
Match: RL44_CANTR (60S ribosomal protein L44 OS=Candida tropicalis GN=RPL44 PE=3 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 2.926e-41 Identity = 77/101 (76.24%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 97 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 399 MVN+PKT+ TYCK K CRKHT+HKVTQYK G+ SL AQGKRRYDRKQSGYGGQTK VFHKKAKTTKKIVL+L+C CK Q P+KRCKH E+GG+KK KG Sbjct: 1 MVNIPKTRNTYCKGKGCRKHTIHKVTQYKAGRASLFAQGKRRYDRKQSGYGGQTKQVFHKKAKTTKKIVLKLECTVCKTKKQLPLKRCKHIELGGEKKQKG 101
BLAST of CN186014 vs. ExPASy Swiss-Prot
Match: RL44_CAEEL (60S ribosomal protein L44 OS=Caenorhabditis elegans GN=rpl-41 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 5.519e-40 Identity = 75/101 (74.26%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 97 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 399 MVNVPK ++T+C K CRKHT HKVTQYKKGK+S AQG+RRYDRKQSG+GGQTKP+F KKAKTTKKIVLR++C CKH Q PIKRCKHFE+GG KK +G Sbjct: 1 MVNVPKARRTFCDGK-CRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRG 100
BLAST of CN186014 vs. ExPASy Swiss-Prot
Match: RL44_BRUMA (60S ribosomal protein L44 OS=Brugia malayi GN=rpl-44 PE=3 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 2.097e-39 Identity = 73/101 (72.28%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 97 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 399 MVNVPKT++T+C K CR+HT+HKVTQYKKGK+S AQG+RRYD KQ G+GGQTKP+F KKAKTTKKIVLR++C CKH Q PIKRCKHFE+GG KK +G Sbjct: 1 MVNVPKTRRTFCDGK-CRRHTMHKVTQYKKGKESRLAQGRRRYDSKQKGFGGQTKPIFRKKAKTTKKIVLRMECTECKHRKQLPIKRCKHFELGGQKKTRG 100
BLAST of CN186014 vs. ExPASy Swiss-Prot
Match: RL36A_TAKRU (60S ribosomal protein L36a OS=Takifugu rubripes GN=rpl36a PE=3 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 7.970e-39 Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 1 Query: 97 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 399 MVNVPKT++TYCK +C+KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CN186014 vs. ExPASy Swiss-Prot
Match: RL36A_ICTPU (60S ribosomal protein L36a OS=Ictalurus punctatus GN=rpl36a PE=3 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 7.970e-39 Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 1 Query: 97 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 399 MVNVPKT++TYCK +C+KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CN186014 vs. ExPASy Swiss-Prot
Match: RL36A_DANRE (60S ribosomal protein L36a OS=Danio rerio GN=rpl36a PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 7.970e-39 Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 1 Query: 97 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 399 MVNVPKT++TYCK +C+KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTYCK--KCKKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CN186014 vs. ExPASy Swiss-Prot
Match: RL44_CHLRE (60S ribosomal protein L44 OS=Chlamydomonas reinhardtii GN=RPL44 PE=3 SV=2) HSP 1 Score: 160.229 bits (404), Expect = 1.041e-38 Identity = 76/98 (77.55%), Postives = 82/98 (83.67%), Query Frame = 1 Query: 97 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKK 390 MVNVPKTK+ +CK C+KH + KVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLR+QCQ CK +KRCKHFEIGGDKK Sbjct: 1 MVNVPKTKRAFCKG--CKKHMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKK 96
BLAST of CN186014 vs. ExPASy Swiss-Prot
Match: RL36A_RAT (60S ribosomal protein L36a OS=Rattus norvegicus GN=Rpl36a PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 6.747e-38 Identity = 77/103 (74.76%), Postives = 85/103 (82.52%), Query Frame = 1 Query: 97 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 399 MVNVPKT++T+CK +C KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CN186014 vs. ExPASy Swiss-Prot
Match: RL36A_PIG (60S ribosomal protein L36a OS=Sus scrofa GN=RPL36A PE=3 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 6.747e-38 Identity = 77/103 (74.76%), Postives = 85/103 (82.52%), Query Frame = 1 Query: 97 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 399 MVNVPKT++T+CK +C KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101
BLAST of CN186014 vs. ExPASy Swiss-Prot
Match: RL36A_MOUSE (60S ribosomal protein L36a OS=Mus musculus GN=Rpl36a PE=3 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 6.747e-38 Identity = 77/103 (74.76%), Postives = 85/103 (82.52%), Query Frame = 1 Query: 97 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQC--QGCKHVSQHPIKRCKHFEIGGDKKGKG 399 MVNVPKT++T+CK +C KH HKVTQYKKGKDSL AQGKRRYDRKQSGYGGQTKP+F KKAKTTKKIVLRL+C C+ IKRCKHFE+GGDKK KG Sbjct: 1 MVNVPKTRRTFCK--KCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG 101 The following BLAST results are available for this feature:
BLAST of CN186014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186014 ID=CN186014; Name=CN186014; organism=Citrus sinensis; type=EST; length=737bpback to top |