CV884224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV884224 vs. ExPASy Swiss-Prot
Match: H4_TETTH (Histone H4 OS=Tetrahymena thermophila GN=HHF1 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 2.853e-30 Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 1 Query: 124 RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 363 RK + +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRTLY Sbjct: 20 RKSNKASIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
BLAST of CV884224 vs. ExPASy Swiss-Prot
Match: H42_TETPY (Histone H4, minor OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 2.853e-30 Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 1 Query: 124 RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 363 RK + +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRTLY Sbjct: 20 RKSNKASIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
BLAST of CV884224 vs. ExPASy Swiss-Prot
Match: H42_BLEJA (Histone H4 (Fragment) OS=Blepharisma japonicum GN=H4 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.357e-30 Identity = 63/78 (80.77%), Postives = 75/78 (96.15%), Query Frame = 1 Query: 121 HRKVLRDNIQGITKPAIRRLARRGGVKR-ISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQG 351 HR+V+R+N QGITKPAIRRLARRGGVKR +SGL+Y+ETR VLK+FLE+V+RDAVTYTEHA+R+TVTA+DVVYALKRQG Sbjct: 12 HRRVIRENNQGITKPAIRRLARRGGVKRTLSGLVYDETRNVLKVFLESVVRDAVTYTEHAKRETVTALDVVYALKRQG 89
BLAST of CV884224 vs. ExPASy Swiss-Prot
Match: H41_TETPY (Histone H4, major OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.084e-29 Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 1 Query: 142 NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 363 +I+GITKPAIRRLARRGGVKRIS IY+++R VLK FLENV+RDAVTYTEHARRKTVTAMDVVYALKRQGRTLY Sbjct: 26 SIEGITKPAIRRLARRGGVKRISSFIYDDSRQVLKSFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 99
BLAST of CV884224 vs. ExPASy Swiss-Prot
Match: H4_ENTHI (Histone H4 OS=Entamoeba histolytica PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.416e-29 Identity = 63/79 (79.75%), Postives = 72/79 (91.14%), Query Frame = 1 Query: 127 KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 363 K +D ++GITKPAIRRLARRGGVKRI+G +Y+ETR VLK FLE VIRD+VTYTEHA+R+TVTAMDVVYALKRQGRTLY Sbjct: 37 KTQQDALKGITKPAIRRLARRGGVKRINGAVYDETRNVLKQFLEQVIRDSVTYTEHAKRRTVTAMDVVYALKRQGRTLY 115
BLAST of CV884224 vs. ExPASy Swiss-Prot
Match: H4_DICDI (Histone H4 OS=Dictyostelium discoideum GN=H4a PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.155e-29 Identity = 64/81 (79.01%), Postives = 71/81 (87.65%), Query Frame = 1 Query: 121 HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY 363 H+K +++I GITKPAIRRLARRGGVKRIS IYEETR VL+ FL NVIRD+V YTEHA R+TVTAMDVVYALKRQGRTLY Sbjct: 24 HKKTQKEHINGITKPAIRRLARRGGVKRISFPIYEETRNVLRTFLTNVIRDSVAYTEHAGRRTVTAMDVVYALKRQGRTLY 104
BLAST of CV884224 vs. ExPASy Swiss-Prot
Match: H4G_HUMAN (Histone H4-like protein type G OS=Homo sapiens GN=HIST1H4G PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.671e-28 Identity = 66/80 (82.50%), Postives = 68/80 (85.00%), Query Frame = 1 Query: 121 HRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL 360 HRKVL DNIQGITK IRRLAR GGVKRI GLIYEETR V K+FLENVI AVT TEHA+RKTVTAM VVY LKRQGRTL Sbjct: 19 HRKVLSDNIQGITKCTIRRLARHGGVKRILGLIYEETRRVFKVFLENVIWYAVTNTEHAKRKTVTAMAVVYVLKRQGRTL 98 The following BLAST results are available for this feature:
BLAST of CV884224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884224 ID=CV884224; Name=CV884224; organism=Citrus sinensis; type=EST; length=543bpback to top |