CV712550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_THET8 (Ribosome-recycling factor OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=frr PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40 Identity = 76/167 (45.51%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 + ++ M+++++++ N +RTGR+NPA+L ++VEYYG+ V L IA + PD +L++Q +D+++LK+IEKAI SDLG+ P+N G+ + + +P LT ERRK+L + V + AEEG+VA+RNIRR+AL +KL KE LSED K +++QK+TDE++ K D + Sbjct: 9 ETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQL 175
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_THET2 (Ribosome-recycling factor OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=frr PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40 Identity = 76/167 (45.51%), Postives = 121/167 (72.46%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 + ++ M+++++++ N +RTGR+NPA+L ++VEYYG+ V L IA + PD +L++Q +D+++LK+IEKAI SDLG+ P+N G+ + + +P LT ERRK+L + V + AEEG+VA+RNIRR+AL +KL KE LSED K +++QK+TDE++ K D + Sbjct: 9 ETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQL 175
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRPS (Ribosome-recycling factor OS=Streptococcus pneumoniae (strain CGSP14) GN=frr PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40 Identity = 80/165 (48.48%), Postives = 114/165 (69.09%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K RM ++ + F +R GR+N ++LD++ VEYYG L IA I P++ LL+ P+DKSSLK IE+A+ +SD+G+TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 10 KERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIERALNASDIGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKREKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRPN (Ribosome-recycling factor OS=Streptococcus pneumoniae GN=frr PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40 Identity = 80/165 (48.48%), Postives = 114/165 (69.09%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K RM ++ + F +R GR+N ++LD++ VEYYG L IA I P++ LL+ P+DKSSLK IE+A+ +SD+G+TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 10 KERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIERALNASDIGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKREKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LACLS (Ribosome-recycling factor OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=frr PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40 Identity = 75/163 (46.01%), Postives = 118/163 (72.39%), Query Frame = -3 Query: 179 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 667 RM+ ++ ++ + +R GR+N ++LD+++V YYG+P L +A I P++ L++ P+DKS LK IEK++ SDLG+TP NDG VIRL +P LT ERR+EL K + K E KVA+RNIRRDA+ +K +K K+++ED++KDL +++QK+TD+ +K+ D + Sbjct: 12 RMKHSLASLQRDLGHLRAGRANASLLDRVQVVYYGAPTPLNQLASITIPEARVLMVTPFDKSILKDIEKSLYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKYIESAKVAIRNIRRDAMDTAKKSEKAKEITEDDLKDLENEIQKVTDDAVKEADRL 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_LACH4 (Ribosome-recycling factor OS=Lactobacillus helveticus (strain DPC 4571) GN=frr PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40 Identity = 77/162 (47.53%), Postives = 118/162 (72.84%), Query Frame = -3 Query: 179 MERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 664 M+++I + + S+R G +N A+LD ++VEYYG+P L ++ I P+ LLI PYD++SL IE A+++S+LG+TP NDG+VIRL +PQLT ERR+E++K V K AE+ K+AVRN+RR+A+ A +K QK+ ++ED ++L +QK+TD+ KKID + Sbjct: 13 MDKSIKVYQKRLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVLLITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEDAKIAVRNVRREAMDALKKEQKDGNITEDEQRNLEKQVQKITDDSTKKIDQL 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_CLOBA (Ribosome-recycling factor OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=frr PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.041e-40 Identity = 79/167 (47.31%), Postives = 118/167 (70.66%), Query Frame = -3 Query: 179 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 679 + + +M++T+ ++++ +++ GR+NP+MLDKI+++YYGS L A I++P+ L+I P++K LK IEKAI+ SDLG+ P+NDG +IRL +P+LT E RK+L K V K EE KVA+R+IRRDA + L+K+ LSED VK D+QK TD +K+ID I Sbjct: 8 NAEEKMQKTVTVLKSELGTMKAGRANPSMLDKIQIDYYGSMCPLSQAANISSPEPRVLMITPWEKQLLKEIEKAILKSDLGLNPSNDGSIIRLVIPELTEETRKDLVKKVKKTGEESKVAIRSIRRDANDKIKALKKDGDLSEDQVKKGEDDVQKKTDAIIKEIDKI 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRZP (Ribosome-recycling factor OS=Streptococcus pneumoniae (strain P1031) GN=frr PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.278e-40 Identity = 82/165 (49.70%), Postives = 113/165 (68.48%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K RM ++ + F +R GR+N ++LD+I VEYYG L IA I P++ LL+ P+DKSSLK IE+A+ +SDLG TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 10 KERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIERALNASDLGNTPANDGSVIRLVVPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRR6 (Ribosome-recycling factor OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=frr PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.278e-40 Identity = 80/165 (48.48%), Postives = 114/165 (69.09%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K RM ++ + F +R GR+N ++LD++ VEYYG L IA I P++ LL+ P+DKSSLK I++A+ +SDLG+TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 10 KERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIDRALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174
BLAST of CV712550 vs. ExPASy Swiss-Prot
Match: RRF_STRP2 (Ribosome-recycling factor OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=frr PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 5.278e-40 Identity = 80/165 (48.48%), Postives = 114/165 (69.09%), Query Frame = -3 Query: 179 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 673 K RM ++ + F +R GR+N ++LD++ VEYYG L IA I P++ LL+ P+DKSSLK I++A+ +SDLG+TP NDG VIRL +P LT E R++L+K V K E KVAVRNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 10 KERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSLKDIDRALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDM 174 The following BLAST results are available for this feature:
BLAST of CV712550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712550 ID=CV712550; Name=CV712550; organism=Citrus sinensis; type=EST; length=846bpback to top |