DT214573

Overview
NameDT214573
Unique NameDT214573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.379e-45
Identity = 95/212 (44.81%), Postives = 128/212 (60.38%), Query Frame = -1
Query:   45 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH--PIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPAT 674
            F+G    +VN    G+ T  G+  + GL VMV+I STGHISGAH NPAVT+ FA  + FPW  VP+YIGAQ+  SL A+  L+ +F+  P    G T P+   G+A   E IISF LMF            GELAGIAVG T++LN+ +AGP +G SMNP R+LGPA+ +  YK IW+Y+  P +G   G   Y+ ++  ++    L K A+
Sbjct:   57 FSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTT-PTDSSGQALVAEIIISFLLMFVISGVATDSRATGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIFAGGFVYNFMRFTDKPLRELTKSAS 267          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.379e-45
Identity = 89/191 (46.60%), Postives = 121/191 (63.35%), Query Frame = -1
Query:   57 IGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPE----EDTDALA 617
            +G + + GL V V+I +TGHISGAH+NPAVT++FA  +HFPW  VP Y  AQ   ++CAAF LK + HPI   G T PS  +  A  +E +++FN+MF           VGELAG+AVG+ V +  + AGP +GGSMNP RTL PAVA N +  +WIY   P++G L GA  Y+ ++  E    +DT  L+
Sbjct:   85 LGQSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIAVIGTTTPSGPHWHALLIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVIGTLSGAWVYTYIRFEEAPAAKDTQRLS 275          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.802e-45
Identity = 87/180 (48.33%), Postives = 116/180 (64.44%), Query Frame = -1
Query:   78 IGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPE 617
            +G + + GL V V+I + GHISGAH+NPAVT+AFA  +HFPW  VP Y  AQ   S+CA+F LK + HPI   G T P+  +  +  +E I++FN+MF           VGELAG+AVG+ V +  + AG  +GGSMNP RTLGPA+A N Y  +WIY   P+LG L GA TY+ ++  E
Sbjct:   80 LGQSVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGSICASFVLKAVLHPIAVLGTTTPTGPHWHSLVIEIIVTFNMMFVTLAVATDTRAVGELAGLAVGSAVCITSIFAGAVSGGSMNPARTLGPALASNLYTGLWIYFLGPVLGTLSGAWTYTYIRFEE 259          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.941e-45
Identity = 101/222 (45.50%), Postives = 137/222 (61.71%), Query Frame = -1
Query:   33 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALK---GIFHPIMGG--GVTVPSAGYG---EAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPATKGSF 674
            F G A+ +VN +     TL G+A   GL +MV+I S GHISGAH+NPAVTIAFA+   FP K VP Y+ +Q++ S  AA  L+   G+ H +  G   V + S+  G   +AF +EFI++F LMF           +GELAG+A+G+TV+LN+LIA P +  SMNP R+LGPA+    YK IWIYL AP LGA+ GA  Y+ V+  ++    + K    GSF
Sbjct:   69 FTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFTMEFIVTFYLMFIISGVATDNRAIGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPALVYGCYKGIWIYLVAPTLGAIAGAWVYNTVRYTDKPLREITK---SGSF 287          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 96/212 (45.28%), Postives = 127/212 (59.91%), Query Frame = -1
Query:   45 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH--PIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPAT 674
            F+G    +VN    G+ T  G+  + GL VMV+I STGHISGAH NPAVT+ FA  + FPW  VP+YIGAQ   SL A+  L+ +F   P    G T P+     A   E IISF LMF           VGELAGIAVG T+M+N+ +AGP +G SMNP R+LGPA+ +  YK IW+Y+  P+LG + G   Y+ ++  ++    L K A+
Sbjct:   57 FSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFGTT-PADSPARALVAEIIISFLLMFVISGVATDNRAVGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMGVYKHIWVYIVGPVLGVISGGFVYNLIRFTDKPLRELTKSAS 267          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP12_ARATH (Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2 PE=1 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 100/224 (44.64%), Postives = 139/224 (62.05%), Query Frame = -1
Query:   33 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF----------HPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPATKGSF 674
            FAG A   VN +   + TL G+A   GL VMV++ S GHISGAH NPAVTIAFA+   FP K VP Y+ +Q++ S  AA  L+ +F          H +  G  T+PS    ++F +EFII+F LMF           +GELAG+AVG+TV+LN++IAGP +G SMNP R+LGPA+  + Y+ +WIY+ +PI+GA+ GA  Y+ V+  ++    + K    GSF
Sbjct:   66 FAGCAAVAVNTQHDKAVTLPGIAIVWGLTVMVLVYSLGHISGAHFNPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDQDVCSGKHDVFVG--TLPSGSNLQSFVIEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVIIAGPVSGASMNPGRSLGPAMVYSCYRGLWIYIVSPIVGAVSGAWVYNMVRYTDKPLREITK---SGSF 284          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP22_ORYSJ (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.437e-44
Identity = 88/190 (46.32%), Postives = 118/190 (62.11%), Query Frame = -1
Query:   30 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDA-LAKPATKGSFR 596
            GL V V+I +TGHISGAH+NPAVT++FA  +HFPW  VP Y  AQ   ++CAAF L+ + +PI   G T P+  +  A  +E +++FN+MF           VGELAG+AVG+ V +  + AGP +GGSMNP RTL PAVA N Y  +WIY   P++G L GA  Y+ ++  E    A  A P    SF+
Sbjct:   92 GLIVTVMIYATGHISGAHMNPAVTLSFAFFRHFPWIQVPFYWAAQFTGAMCAAFVLRAVLYPIEVLGTTTPTGPHWHALVIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVYTGLWIYFLGPVVGTLSGAWVYTYIRFEEAPAAAGGAAPQKLSSFK 281          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.795e-44
Identity = 84/197 (42.64%), Postives = 121/197 (61.42%), Query Frame = -1
Query:   27 IGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPATKGSFRR 617
            +G + + GL V V+I + GHISGAH+NPAVT+AFA  +HFPW  VP Y  AQ   ++CA+F LK + HP+   G T P   +  +  +E I++FN+MF           VGELAG+AVG+ V +  + AG  +GGSMNP RTLGPA+A N +  +WIY   P++G L GA TY+ ++  +   +  ++  +    RR
Sbjct:   82 LGQSIAGGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVIHPVDVIGTTTPVGPHWHSLVVEVIVTFNMMFVTLAVATDTRAVGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNKFDGLWIYFLGPVMGTLSGAWTYTFIRFEDTPKEGSSQKLSSFKLRR 278          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NO26_SOYBN (Nodulin-26 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 6.407e-43
Identity = 93/213 (43.66%), Postives = 130/213 (61.03%), Query Frame = -1
Query:   45 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF---HPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPAT 674
            FAG A+ +VN+      T  G+A   GL + V++ + GHISG H NPAVTIAFA+ + FP   VP Y+ AQ++ S+ A+  L+ +F   H    G  TVP+    +AF  EFI++F LMF           VGE AGIA+G+T++LN++I GP TG SMNP R+LGPA     Y+ IWIYL AP++GA+ GA  Y+ V+  ++      K A+
Sbjct:   52 FAGCASLVVNENYYNMITFPGIAIVWGLVLTVLVYTVGHISGGHFNPAVTIAFASTRRFPLIQVPAYVVAQLLGSILASGTLRLLFMGNHDQFSG--TVPNGTNLQAFVFEFIMTFFLMFVICGVATDNRAVGEFAGIAIGSTLLLNVIIGGPVTGASMNPARSLGPAFVHGEYEGIWIYLLAPVVGAIAGAWVYNIVRYTDKPLSETTKSAS 262          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.407e-43
Identity = 94/212 (44.34%), Postives = 131/212 (61.79%), Query Frame = -1
Query:   45 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFH--PIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDALAKPAT 674
            FAG  +  VN K  GS T  G+  + GL VMV++ + G+ISGAH NPAVTI F+    FPWK VP+YI AQ+M S+ A+  L  +F   P    G TVP    G++ A+E IISF LMF           +G++AGIAVG T+ LN+ +AGP +G SMNP R++GPA+  + Y  +W+Y+  PI+G L GA  Y+ ++  ++    LAK A+
Sbjct:   57 FAGCGSVAVN-KIYGSVTFPGICVTWGLIVMVMVYTVGYISGAHFNPAVTITFSIFGRFPWKQVPLYIIAQLMGSILASGTLALLFDVTPQAYFG-TVPVGSNGQSLAIEIIISFLLMFVISGVATDDRAIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIVKHVYTGLWVYVVGPIIGTLAGAFVYNLIRSTDKPLRELAKSAS 266          
The following BLAST results are available for this feature:
BLAST of DT214573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
NIP42_ARATH1.379e-4544.81Probable aquaporin NIP4-2 OS=Arabidopsis thaliana ... [more]
NIP22_MAIZE1.379e-4546.60Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1[more]
NIP21_MAIZE1.802e-4548.33Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2[more]
NIP11_ARATH8.941e-4545.50Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1... [more]
NIP41_ARATH1.168e-4445.28Putative aquaporin NIP4-1 OS=Arabidopsis thaliana ... [more]
NIP12_ARATH1.168e-4444.64Aquaporin NIP1-2 OS=Arabidopsis thaliana GN=NIP1-2... [more]
NIP22_ORYSJ4.437e-4446.32Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica G... [more]
NIP21_ORYSJ5.795e-4442.64Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
NO26_SOYBN6.407e-4343.66Nodulin-26 OS=Glycine max PE=1 SV=2[more]
NIP1_NICAL6.407e-4344.34Probable aquaporin NIP-type OS=Nicotiana alata PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_3G01_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-3G01-N1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214573 ID=DT214573; Name=DT214573; organism=Citrus sinensis; type=EST; length=701bp
ACTTCCGTGACAGTGTTGATCAATCACCTTCTGAAGCTGCCCTTTGTGGC
AGGCTTTGCGAGGGCATCGGTGTCTTCCTCCGGTAGCTTGACAGCAGAAT
AAGTTCCTGCACCGCATAATGCCCCAAGAATGGGGGCGGTCAGGTAGATC
CATATGGCCTTGTAATTGTTTACTGCTACGGCTGGCCCCAGTGTTCTTAC
TGGATTCATCGAGCCACCCGTTGATGGCCCGGCTATGAGTATGTTGAGCA
TGACAGTTGCTCCCACCGCGATTCCCGCCAACTCGCCCACAGCTCTCGTG
TCGGTGGCTACAGCAGTGACAACAAACATGAGATTGAAGCTAATTATGAA
TTCCAAAGCAAAAGCTTCACCATATCCTGCTGAAGGAACTGTGACTCCCC
CTCCCATAATTGGATGAAAAATTCCCTTTAAGGCAAATGCAGCACATAGT
GATGCCATTATTTGTGCTCCAATATAAACGGGTACATGTTTCCATGGAAA
GTGCTTTAGGGCAGCAAAGGCAATGGTGACAGCAGGGTTGAGATGGGCGC
CGGAGATGTGACCGGTCGATAAGATGACGACCATGACAGCGAGACCGGTG
GAGCCGGCGAGGCCAATTAGGGTTTCTGAGCCTTGTGTTTTCTGGTTCAC
AATAGCTGTGGCTGTCCCAGCAAAATATTAGCATAAGTGTGCCCACAAAT
T
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