DT214573

Overview
NameDT214573
Unique NameDT214573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 70/203 (34.48%), Postives = 104/203 (51.23%), Query Frame = -1
Query:   33 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP------SAGYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEED-----TDALAKPA--TKGSF 596
            GL++  ++   GHISG H+NPAVT+A    +         YI AQ + ++  A  L  +  P + GG+ V       +AG+G    +E II+F L+F              G +A +A+G +V +  L A   TG SMNP R+ GPAV + N++  WIY   PI+GA+   G Y  V  P+ +      +A +K A  TKGS+
Sbjct:   78 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHG--LLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCPDVEFKRRFKEAFSKAAQQTKGSY 277          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 70/203 (34.48%), Postives = 104/203 (51.23%), Query Frame = -1
Query:   33 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPS------AGYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEED-----TDALAKPA--TKGSF 596
            GL++  ++   GHISG H+NPAVT+A    +         YI AQ + ++  A  L  +  P + GG+ V +      AG+G    +E II+F L+F              G +A +A+G +V +  L A   TG SMNP R+ GPAV + N++  WIY   PI+GA+   G Y  V  P+ +      +A +K A  TKGS+
Sbjct:   78 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHG--LLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFCPDVELKRRFKEAFSKAAQQTKGSY 277          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21
Identity = 67/196 (34.18%), Postives = 98/196 (50.00%), Query Frame = -1
Query:  123 FAGTATAIV-NQKTQGSET----LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYG-----EAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILG 674
            FAG  +AI  +Q T+G       L+ +A +   A+ V +    +ISG HLNPAVT   A   H       +Y  AQ++ +  A F L+ + H     G  +P+ G       E   +E +I+F L++              G +A +A+G  V  NIL AGP +GGSMNP R+ GPAVA  N+   W+Y   P++G
Sbjct:   33 FAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTH-----GQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLVG 223          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21
Identity = 69/196 (35.20%), Postives = 95/196 (48.47%), Query Frame = -1
Query:  123 FAGTATAIV-NQKTQGSET----LIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYG-----EAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILG 674
            FAG  +AI   Q T G       L+ +A +  LA+ V +    +ISG HLNPAVT   A   H        Y  AQ++ +  A   LK + H     G  +P+ G       E   +E +I+F L++              G +A IA+G  V  NIL AGP +GGSMNP R+ GPAVA  N+   W+Y   P++G
Sbjct:   33 FAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTH-----GKAIPTHGVAGISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIG 223          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21
Identity = 69/197 (35.03%), Postives = 95/197 (48.22%), Query Frame = -1
Query:  123 FAGTATAIVNQKTQGSETL-----IGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPS----AGYG--EAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILG 674
            FAG  +AI   K      L     + +A   G A+ V +    +ISG H+NPAVT   A            Y  AQ++ S  A F LK +      GG+ VP+    AG G  E   +E II+F L++              G +A +A+G  V  NIL AGP +GGSMNP R+ GPAVA  ++   W+Y   P++G
Sbjct:   33 FAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT-----GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIG 224          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 69/222 (31.08%), Postives = 105/222 (47.30%), Query Frame = -1
Query:   66 FAGTATAIVNQKTQGS--ETLIGLAGSTGLA---VMVVILSTG-HISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYG----EAFALEFIISFNLMFXXXXXXXXXXXV-GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAV--------KLPEEDTD 674
            FAG  +A+   K  G   +T++GL  +  LA   V+ V++S G H+SG H+NPAVT+  AA          +Y+ AQ++ S  A   L   F  +   GV V + G G        +E +++F+L+F             G +  + VG  V  N+L  GP +G SMNP R+ GPA+    +   W+Y   P++G       Y  +         LP +DTD
Sbjct:   33 FAGVGSAMATGKLAGGGGDTVVGLT-AVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLA--FLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRRAVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWADHWVYWVGPLIGGPLAGLVYDGLFMAQGGHEPLPRDDTD 251          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 69/203 (33.99%), Postives = 103/203 (50.74%), Query Frame = -1
Query:   33 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPS------AGYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEED-----TDALAKPA--TKGSF 596
            GL++  ++   GHISG H+NPAVT+A    +         YI AQ + ++  A  L  +  P + GG+ V +      AG+G    +E II+F L+F              G +A +A+G +V +  L A   TG SMNP R+ GPAV + N++  WIY   PI+GA+     Y  V  P+ +      +A +K A  TKGS+
Sbjct:   78 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHG--LLVELIITFQLVFTIFASCDSKRTDVTGSVA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEAFSKAAQQTKGSY 277          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 69/203 (33.99%), Postives = 103/203 (50.74%), Query Frame = -1
Query:   33 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPS------AGYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEED-----TDALAKPA--TKGSF 596
            GL++  ++   GHISG H+NPAVT+A    +         YI AQ + ++  A  L  +  P + GG+ V +      AG+G    +E II+F L+F              G +A +A+G +V +  L A   TG SMNP R+ GPAV + N++  WIY   PI+GA+     Y  V  P+ +      +A +K A  TKGS+
Sbjct:   81 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGLGVTTVHGNLTAGHG--LLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEAFSKAAQQTKGSY 280          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 69/203 (33.99%), Postives = 102/203 (50.25%), Query Frame = -1
Query:   33 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPS------AGYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEED-----TDALAKPA--TKGSF 596
            GL++  ++   GHISG H+NPAVT+A    +         YI AQ + ++  A  L  +  P + GG+ V +      AG+G    +E II+F L+F              G +A +A+G +V +  L A   TG SMNP R+ GPAV + N+   WIY   PI+GA+     Y  V  P+ +      +A +K A  TKGS+
Sbjct:   78 GLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHG--LLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHWIYWVGPIMGAVLAGALYEYVFCPDVELKRRLKEAFSKAAQQTKGSY 277          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.300e-19
Identity = 65/194 (33.51%), Postives = 93/194 (47.94%), Query Frame = -1
Query:  123 FAGTATAIVNQKTQGSETL-----IGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALK---GIFHPIMGGGVTVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILG 674
            FAG  +AI   K  G   L     + +A   G  + V +    +ISG H+NPAVT   A            Y  AQ++ ++  A  ++   G+  P  G    +   G  E   +E I++F L++              G +A IA+G  V  NIL+AGP +GGSMNP R+ GPAVA  +Y  IWIY   P++G
Sbjct:   34 FAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG----LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVG 223          
The following BLAST results are available for this feature:
BLAST of DT214573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
AQP4_HUMAN2.369e-2134.48Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_DIPME2.369e-2134.48Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
TIP23_MAIZE6.894e-2134.18Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP21_ORYSJ6.894e-2135.20Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP21_ARATH9.003e-2135.03Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP44_MAIZE2.620e-2031.08Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
AQP4_RAT2.620e-2033.99Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_NOTAL2.620e-2033.99Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_MOUSE5.836e-2033.99Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
TIP22_ORYSJ1.300e-1933.51Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_3G01_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-3G01-N1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214573 ID=DT214573; Name=DT214573; organism=Citrus sinensis; type=EST; length=701bp
ACTTCCGTGACAGTGTTGATCAATCACCTTCTGAAGCTGCCCTTTGTGGC
AGGCTTTGCGAGGGCATCGGTGTCTTCCTCCGGTAGCTTGACAGCAGAAT
AAGTTCCTGCACCGCATAATGCCCCAAGAATGGGGGCGGTCAGGTAGATC
CATATGGCCTTGTAATTGTTTACTGCTACGGCTGGCCCCAGTGTTCTTAC
TGGATTCATCGAGCCACCCGTTGATGGCCCGGCTATGAGTATGTTGAGCA
TGACAGTTGCTCCCACCGCGATTCCCGCCAACTCGCCCACAGCTCTCGTG
TCGGTGGCTACAGCAGTGACAACAAACATGAGATTGAAGCTAATTATGAA
TTCCAAAGCAAAAGCTTCACCATATCCTGCTGAAGGAACTGTGACTCCCC
CTCCCATAATTGGATGAAAAATTCCCTTTAAGGCAAATGCAGCACATAGT
GATGCCATTATTTGTGCTCCAATATAAACGGGTACATGTTTCCATGGAAA
GTGCTTTAGGGCAGCAAAGGCAATGGTGACAGCAGGGTTGAGATGGGCGC
CGGAGATGTGACCGGTCGATAAGATGACGACCATGACAGCGAGACCGGTG
GAGCCGGCGAGGCCAATTAGGGTTTCTGAGCCTTGTGTTTTCTGGTTCAC
AATAGCTGTGGCTGTCCCAGCAAAATATTAGCATAAGTGTGCCCACAAAT
T
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