DT214568

Overview
NameDT214568
Unique NameDT214568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 9.038e-93
Identity = 153/245 (62.45%), Postives = 195/245 (79.59%), Query Frame = -3
Query:   99 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSMVAR 833
            EL++ S+KTIDGRG +V +++GPC+ I+  +NIIIH I IHDC P    +++D P H G   +SDGD ++IFG + +WIDHC+ S+C DGLID ++GSTAITISNN+M HH++VML+GHSD ++ DKNMQVTIAFN FG+GLVQRMPRCRHG+FH+VNN YT WEMYAIGGSA+PTI SQGN F+A N    KEVTKHE   E  +W+ WNWRSEGD++LNGA+F  SG E P++Y +ASS+ AR
Sbjct:  143 ELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPE-SKWRDWNWRSEGDMLLNGAYFRESGAEAPSTYARASSLSAR 386          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 7.651e-92
Identity = 157/245 (64.08%), Postives = 191/245 (77.96%), Query Frame = -3
Query:   99 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSMVAR 833
            EL+MNS+KTIDGRG NV ++ G C+++  V+NIIIH I IHDC   G+A+VR S  HYG R  +DGDGISIFGS  IWIDH + S C DGLID + GSTAITISNNY+ HHNE +L+GH+D ++ DK MQVTIA+N FG+GL+QRMPRCRHG+FH+VNN YT WEMYAIGGSANPTINSQGN F+A  +   KEVTK  + +   EW  WNWRS+GDLMLNGA+FT SG    A+Y +ASS+ A+
Sbjct:  152 ELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNRFAKEVTK-RVGAGKGEWNNWNWRSQGDLMLNGAYFTSSGAGASANYARASSLAAK 395          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2)

HSP 1 Score: 333.954 bits (855), Expect = 6.477e-91
Identity = 155/245 (63.27%), Postives = 190/245 (77.55%), Query Frame = -3
Query:   99 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSMVAR 833
            EL++NS+KTIDGRG NV ++NG CI+I  V+N+I+H ++IHDC P G+A+VR S  H+G R  +DGD ISIFGS  +WIDH + SHC DGL+D V GSTAITISNN++ HHNEVML+GHSD +  DK MQVTIA+N FG GL+QRMPRCRHG+FH+VNN YT WEMYAIGGSANPTINSQGN + A  +   KEVTK  + +    WK WNWRSEGDL+ NGA+FT SG     SY +ASS+ A+
Sbjct:  163 ELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTK-RVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYARASSLSAK 406          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 1.595e-89
Identity = 154/242 (63.64%), Postives = 183/242 (75.62%), Query Frame = -3
Query:  108 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSM 833
            EL+ NSYKT+DGRG NV +  G CI++  VSNIIIHNI+IH C  +G+  VR SP HYG R +SDGDGISIFGS+DIWIDHC+ S C DGLID V GST ITISNN+  HHNEVML+GHSD +  D  MQVTIAFN FG+ L+QRMPRCR G+ H+VNN +T WEMYAIGGS NPTINSQGN + A  +   KEVTK  + + D +WK WNWRSEGD+++NGAFF  SG+     Y KA S+
Sbjct:  156 ELIFNSYKTLDGRGANVHIVGGGCITLQYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTIAFNHFGEKLIQRMPRCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTK-RVETPDGDWKGWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSV 396          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana GN=At3g24230 PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.351e-88
Identity = 156/275 (56.73%), Postives = 200/275 (72.73%), Query Frame = -3
Query:   27 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQ------ETPASYMKASSMVARXXXXXXXXXXXXXXXXSCRNSQPC 833
            EL+MNS+KTID RG NV ++NG CI+I N++N+I+H ++IHDC   G+  VR SP   G RG +DGD I+IFGS  IWIDH + S+C DGL+D+V GSTAITISNN+  HH+EVML+GH+D ++ DK MQVT+A+N FG+GL+QRMPRCRHG+FH+VNN YT W+MYAIGGSANPTINSQGN F A  + S KEVTK  + ++ +EW +WNWRSE DL++NGAFFTPSG+      +T +   K +SMV                  SCR  +PC
Sbjct:  186 ELIMNSFKTIDARGANVHIANGACITIQNITNVIVHGLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSSHIWIDHNSLSNCTDGLVDVVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAIGGSANPTINSQGNRFAAPKNHSAKEVTK-RLDTKGNEWMEWNWRSEKDLLVNGAFFTPSGEGASGDSQTLSLPAKPASMV--------DAITASAGALSCRRGKPC 451          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 3.113e-85
Identity = 147/242 (60.74%), Postives = 180/242 (74.38%), Query Frame = -3
Query:  108 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSM 833
            EL++NSYKT+DGRG  V ++   C+++  V +IIIHN++I+DC P+           +  RGRSDGDGISIFGS+ IW+DHC+ SHC DGLID V GSTAITISNNY  HH+EVML+GH D+++ D  MQVTIAFN FG GLVQRMPRCR G+ H+VNN +T W+MYAIGGS NPTINSQGN + A +D S KEVTK     +D EW  WNWR+EGDLM NGAFF  SG+   + Y KASS+
Sbjct:  162 ELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAG---------FEKRGRSDGDGISIFGSQKIWVDHCSMSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDGEWSNWNWRTEGDLMENGAFFVASGEGMSSMYSKASSV 394          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.823e-78
Identity = 136/236 (57.63%), Postives = 175/236 (74.15%), Query Frame = -3
Query:  138 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISE----DDEWKKWNWRSEGDLMLNGAFFTPSGQET 833
            EL+MNSYKTIDGRG  V+++ GPCI+I +VS++IIH I IHDC P  S  VR SP H G R  SDGD I+IF S  IWIDHC FS C DGLID+++ STA+TISNNY   H++VML+GH+D+   DK M+VTIAFN FG GL++RMPR R G+ H+ NN Y  W+MYAIGGSA+PTI S+GN F+AS+D S K+V+  +I+++      +WK+W WR+  D+  NGA+F PSG  T
Sbjct:  118 ELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPTHVGSRKGSDGDAIAIFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFVASDDPSKKQVSSFKIVTKRIDSGYDWKRWKWRTSKDVFKNGAYFVPSGYGT 353          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.830e-77
Identity = 137/240 (57.08%), Postives = 171/240 (71.25%), Query Frame = -3
Query:  117 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQ-ETPASYMKA 833
            EL++NSYKTIDGRG  V+++ GPCI+I +V+N+I+H I IHDC P  S  VR SP H G R  SDGD I+IFGS ++WIDHC  + C DGLID+++ STAITISNNY   H++VML+GH+D+F  D  M+VT+AFN FG GLV+RMPR R G+ H+ NN Y  W MYAIGGSA+PTI S+GN FIAS+   +KEVTK E+      W  W WR+  D+  NGAFF PSG    P  Y  A
Sbjct:  128 ELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKSGKVRSSPTHVGHRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVIHASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREV---KGGWNNWRWRTSNDVFKNGAFFVPSGYGSIPLPYSSA 364          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 5.323e-77
Identity = 133/229 (58.08%), Postives = 168/229 (73.36%), Query Frame = -3
Query:  147 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSG 833
            EL++NSYKTIDGRG  V+++ GPCI+I +V+N+I+H I IHDC P    +VR SP H G R  SDGD I+IFGS +IWIDHC  + C DGLID+++ ST ITISNNY   H++VML+GH+DDF  D  M+VT+AFN FG GLV+RMPR R G+ H+ NN Y  W MYAIGGSA+PTI S+GN FIAS+  ++KEVTK E+      W  W WR+  D+  NGA+F PSG
Sbjct:  128 ELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKYGMVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVIHASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREV---KGGWNNWRWRTSKDVFKNGAYFVPSG 353          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL_LILLO (Pectate lyase OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 6.952e-77
Identity = 138/245 (56.33%), Postives = 179/245 (73.06%), Query Frame = -3
Query:   99 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSMVAR 833
            EL++N+ KTIDGRG NVQ++ G  +++  V N+IIH I+IHD  P    ++RDS KH G R RSDGDGISI GS +IWIDH + + C DGLID++ GSTAITISN ++  H++VML+G SD ++ D+ MQVT+AFN FG GLVQRMPRCR+GF H+VNN YT W MYA+GGS +PTI SQGN +IA + E+ KEVTK +  +E  EW KW W+S+GDL ++GAFF  SG      Y K   + A+
Sbjct:  168 ELIINNDKTIDGRGANVQIAGGAQLTVQFVHNVIIHGIHIHDIKPGEGGLIRDSEKHSGIRTRSDGDGISIIGSSNIWIDHVSLARCSDGLIDVILGSTAITISNCHLTEHDDVMLLGASDTYTQDEIMQVTVAFNHFGRGLVQRMPRCRYGFVHVVNNDYTHWIMYAVGGSQHPTIISQGNRYIAPHIEAAKEVTKRD-YAEPAEWSKWTWKSQGDLFVSGAFFVESGGPFENKYSKKDLIKAK 411          
The following BLAST results are available for this feature:
BLAST of DT214568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PEL11_ARATH9.038e-9362.45Putative pectate lyase 11 OS=Arabidopsis thaliana ... [more]
PEL14_ARATH7.651e-9264.08Putative pectate lyase 14 OS=Arabidopsis thaliana ... [more]
PEL1_ARATH6.477e-9163.27Probable pectate lyase 1 OS=Arabidopsis thaliana G... [more]
PEL12_ARATH1.595e-8963.64Probable pectate lyase 12 OS=Arabidopsis thaliana ... [more]
PEL9_ARATH1.351e-8856.73Probable pectate lyase 9 OS=Arabidopsis thaliana G... [more]
PEL13_ARATH3.113e-8560.74Probable pectate lyase 13 OS=Arabidopsis thaliana ... [more]
PEL2_ARATH2.823e-7857.63Putative pectate lyase 2 OS=Arabidopsis thaliana G... [more]
PEL17_ARATH1.830e-7757.08Putative pectate lyase 17 OS=Arabidopsis thaliana ... [more]
PEL16_ARATH5.323e-7758.08Probable pectate lyase 16 OS=Arabidopsis thaliana ... [more]
PEL_LILLO6.952e-7756.33Pectate lyase OS=Lilium longiflorum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_23A09_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-23A09-A17-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214568 ID=DT214568; Name=DT214568; organism=Citrus sinensis; type=EST; length=835bp
GGTATAANCATTTGGTAGCAAAATTAGCAAGGTTGGCTATTCCGGCAACT
GAGCGTTCCGGCGGACGGAGAACTAGCAGTTAAAAGTGAAGTGGCCGGTC
TCGCAACCATGCTTGAAGCTTTCATGTAGCTTGCAGGAGTTTCTTGTCCA
GAAGGTGTAAAGAAAGCACCATTAAGCATCAGATCTCCTTCTGATCTCCA
ATTCCATTTCTTCCATTCATCATCTTCTGATATGATTTCATGTTTTGTCA
CCTCCTTGGTAGATTCGTCATTTGATGCTATGAAAACATTTCCTTGGCTA
TTGATTGTAGGATTAGCACTTCCTCCAATTGCATACATCTCCCACCCAGT
GTATATATTATTCACAATGTGAAAGAACCCATGTCGGCACCTGGGCATTC
TTTGAACAAGACCATCTCCGAAAAAATTGAAGGCAATGGTGACCTGCATA
TTCTTGTCAGCAGAGAAATCATCACTATGACCCATTAGCATGACTTCATT
GTGATGGAACATGTAGTTGTTTGAGATTGTTATGGCTGTAGAGCCATAAA
CAATGTCGATGAGTCCGTCATAGCAATGGGAGAAAGTACAGTGATCAATC
CAGATATCTCTTGAACCGAATATCGATATGCCATCTCCATCTGATCTGCC
TCTTGGTCCATAATGTTTCGGCGAGTCCCTCACCACAGCACTTCCTGCTG
GTACACAGTCATGTATGTAAATGTTATGTATGATGATGTTACTTACGTTG
TAAATTGATATGCATGGTCCATTTGACATTTGAACATTAAACCCTCTTCC
ATCTATGGTCTTGTATGAATTCATGACTAGTTCTT
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