DT214568

Overview
NameDT214568
Unique NameDT214568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL3_ARATH (Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 8.795e-72
Identity = 128/230 (55.65%), Postives = 163/230 (70.87%), Query Frame = -3
Query:  144 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQ 833
            EL++ S KTIDGRG  V +  G  +++  V+N+IIHNIY+   VP    ++RDS  H G R +SDGDGIS+FG+ +IWIDH + + C DG+ID + GSTA+TISN++   H EVML G  D+   DK MQ+T+AFN FG  L QRMPRCR+G  H+VNN YT WEMYAIGG+ NPTI SQGN FIA  +E  K++TK E  +   EWK WNW+SEGD  LNGA+F  SG+
Sbjct:  187 ELMITSDKTIDGRGARVYIMEGAGLTLQFVNNVIIHNIYVKHIVPGNGGLIRDSEAHIGLRTKSDGDGISLFGATNIWIDHVSMTRCADGMIDAIDGSTAVTISNSHFTDHQEVMLFGARDEHVIDKKMQITVAFNHFGKRLEQRMPRCRYGTIHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAPPNEEAKQITKRE-YTPYGEWKSWNWQSEGDYFLNGAYFVQSGK 415          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL19_ARATH (Putative pectate lyase 19 OS=Arabidopsis thaliana GN=At5g15110 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.500e-71
Identity = 129/230 (56.09%), Postives = 168/230 (73.04%), Query Frame = -3
Query:  147 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIA-SNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSG 833
            EL++NS+KTID RG NV +++G  I++  V N+IIH ++IH    +   ++RDS  H+G R R+DGDG+SI+GS +IW+DH + S C DGLID + GST ITISN++  HHN+VML+G  +   ADK+MQVT+A+N FG GLVQRMPR R GF H+VNN YT WE+YAIGGS  PTI S GN FIA  +    +EVTK +  SE DEWK WNWRS+ D+ +NGA+F  SG
Sbjct:  204 ELLINSHKTIDARGANVHVAHGAGITMQFVKNVIIHGLHIHHISESSGGMIRDSVDHFGMRTRADGDGLSIYGSSNIWLDHISMSKCQDGLIDAIVGSTGITISNSHFTHHNDVMLLGAQNTNEADKHMQVTVAYNHFGKGLVQRMPRIRWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKPHYREVTKRDYASE-DEWKHWNWRSDKDVFMNGAYFRQSG 432          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL59_SOLLC (Probable pectate lyase P59 OS=Solanum lycopersicum GN=LAT59 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.959e-71
Identity = 130/229 (56.77%), Postives = 160/229 (69.87%), Query Frame = -3
Query:  147 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSG 833
            E++M S KTID RG NV ++ G  I++  + N+IIH ++IHD V     +VRD+  H G R +SDGDGISIFG+  IWIDH +   CYDGLID V GST ITISN +   HNEVML G SD  S D+ MQ+T+AFN FG  L+QRMPRCR G+ H+VNN YT W MYAIGGS +PTI  QGN FIA  D   K+VTK E  + +  W +W WRSEG+L +NGA+FT SG
Sbjct:  181 EMIMQSDKTIDARGVNVHITKGAGITLQYIKNVIIHGLHIHDIVEGNGGMVRDAVDHIGIRTKSDGDGISIFGASYIWIDHVSMQRCYDGLIDAVEGSTGITISNGHFTDHNEVMLFGASDSSSIDQVMQITLAFNHFGKRLIQRMPRCRWGYIHVVNNDYTHWNMYAIGGSMHPTIIHQGNRFIAPPDIFKKQVTKRE-YNPESVWMQWTWRSEGNLFMNGAYFTESG 408          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL7_ARATH (Probable pectate lyase 7 OS=Arabidopsis thaliana GN=At3g01270 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.166e-70
Identity = 129/230 (56.09%), Postives = 165/230 (71.74%), Query Frame = -3
Query:  147 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIAS-NDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSG 833
            EL++ S KTID RG NV ++ G  I++  V NIIIH +++H  V +   ++RDS  H+G RG +DGDGISIFG+ +IW+DH + S C DGLID + GSTAITISN++  HHN+VML+G  ++   DK MQVT+A+N FG GLVQRMPR R GF H+VNN YT WE+YAIGGS  PTI S GN FIA  + +  +EVTK +  SE  EWK WNWRSE D+ +N A+F  SG
Sbjct:  207 ELMITSDKTIDARGANVHIAYGAGITMQYVHNIIIHGLHVHHIVKSSGGLIRDSINHFGHRGEADGDGISIFGATNIWLDHISMSKCQDGLIDAIMGSTAITISNSHFTHHNDVMLLGAQNNNMDDKKMQVTVAYNHFGKGLVQRMPRVRWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKQHYREVTKRDYASES-EWKNWNWRSEKDVFMNNAYFRQSG 435          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.027e-68
Identity = 130/232 (56.03%), Postives = 160/232 (68.97%), Query Frame = -3
Query:  141 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVT-KHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQE 833
            EL++ S KTIDGRGFNV + NG  I I + SNIII N+ IH+ VP    ++R+S  H G RG  +GDGISIF S DIWIDH + S   DGLID V  ST ITISN +   H +VML G +D +  DK+M++T+A+N FG  L QRMPRCR GFFH+VNN YT WE YAIGGS+  TI SQGN FIA ++   KEVT + ++ +   EW KW W S+GD M NGA FTPSG +
Sbjct:  128 ELIVTSNKTIDGRGFNVHIQNGAGIKIQSASNIIISNLRIHNIVPTPGGLLRESEDHVGLRGSDEGDGISIFSSHDIWIDHISMSRATDGLIDAVAASTNITISNCHFTDHEKVMLFGANDHYVLDKDMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSSGATIISQGNRFIAEDELLVKEVTYREKLTASVAEWMKWTWISDGDDMENGATFTPSGDQ 359          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.994e-67
Identity = 120/229 (52.40%), Postives = 155/229 (67.69%), Query Frame = -3
Query:  147 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSG 833
            +L++NSYKTIDGRG  V+++NGPC+ I  V ++IIH I IHDC                P G  DGDGI +F S  +WIDHC  S C+DGLID++  STA+TISNNY   H++VML+GH D +  DK+M+VTIAFN FG GL++RMPR R G+ H+ NN Y  W+MYAIGGSANP I S+GN F+A    S+K+VTK  +   D   K+W W +  D+ +NGAFF P G
Sbjct:  117 QLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKA-------------DPNGM-DGDGIRVFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRSSKQVTKRMMAGPDS--KRWKWGTSRDVFMNGAFFGPPG 329          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL56_SOLLC (Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2)

HSP 1 Score: 249.595 bits (636), Expect = 1.606e-65
Identity = 130/270 (48.15%), Postives = 167/270 (61.85%), Query Frame = -3
Query:   27 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVT-KHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSMVARXXXXXXXXXXXXXXXXSCRNSQPC 833
            EL+++S KTIDGRG  V ++NG  I I + SN+II N+ IH+ VP    ++R+S  H G RG  +GD ISIF S DIWIDH + S   DGLID V GST ITISN +   H +VML G +D    D+ M++T+A+N FG  L QRMPRCR GFFH+VNN YT WE YAIGGS+  TI SQGN FIA +    KEVT + +  S  +EW KW W ++GD   NGA FTPSG +   S +   +++                  SC+  +PC
Sbjct:  129 ELIVSSNKTIDGRGKYVHIANGAGIKIQSASNVIISNLRIHNIVPTAGGLLRESDDHLGLRGADEGDAISIFNSHDIWIDHISMSRATDGLIDAVAGSTNITISNCHFTDHEKVMLFGANDHAEEDRGMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSSGATIISQGNRFIAEDKLLVKEVTYREKSTSSVEEWMKWTWITDGDDFENGATFTPSGDQNLLSKIDHLNLIQPEPSSKVGLLTKFSGALSCKIRRPC 398          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL6_ARATH (Probable pectate lyase 6 OS=Arabidopsis thaliana GN=At2g02720 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.740e-65
Identity = 121/230 (52.61%), Postives = 159/230 (69.13%), Query Frame = -3
Query:  144 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQ 833
            EL++ + KTIDGRG  + ++ G  +++  V N+IIHNI+I         ++ DS +H+G R  SDGDGI+IFG+ ++WIDH + + C DG+ID + GSTAITISN++   H+EVML G ++    DK MQ+T+AFN FG  L QRMPR R G  H+VNN YT WEMYAIGG+ NPTI SQGN FIA   E +K+VTK E  +   EWK WNW+SE D  LNGA+F  SG+
Sbjct:  183 ELIITNDKTIDGRGAKIYITGGAGLTLQFVRNVIIHNIHIKQIKRGAGGLIIDSEQHFGLRTVSDGDGINIFGATNVWIDHVSMTDCSDGMIDAIMGSTAITISNSHFTDHDEVMLFGGTNKDVIDKKMQITVAFNHFGKRLKQRMPRVRFGLVHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAPPIEDSKQVTKRE-YTPYPEWKSWNWQSEKDYFLNGAYFVQSGK 411          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: MPAA2_AMBAR (Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.440e-58
Identity = 119/271 (43.91%), Postives = 159/271 (58.67%), Query Frame = -3
Query:   27 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDC--VPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSMVARXXXXXXXXXXXXXXXXSCRNSQPC 833
            E+V+ S KTIDGRG  V++  G  I++ NV N+IIHNI IHD   +P G       P    PR +SDGD I + GS DIWIDHCT S  +DGL+D+ +GST +TISN    HH + +L+G SD    D  M VT+A+N F + + +RMPRCR GFF IVNN Y  W+ YAIGGS+NPTI SQGN F+A +    K V      +++ EW  WNWR++ D++ NGA F  SG +   +  + + M+                  +C    PC
Sbjct:  131 EMVVTSDKTIDGRGAKVELVYGG-ITLMNVKNVIIHNIDIHDVRVLPGGRIKSNGGPAI--PRHQSDGDAIHVTGSSDIWIDHCTLSKSFDGLVDVNWGSTGVTISNCKFTHHEKAVLLGASDTHFQDLKMHVTLAYNIFTNTVHERMPRCRFGFFQIVNNFYDRWDKYAIGGSSNPTILSQGNKFVAPDFIYKKNVCL-RTGAQEPEWMTWNWRTQNDVLENGAIFVASGSDPVLTAEQNAGMMQAEPGDMVPQLTMNAGVLTCSPGAPC 397          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNVI (Major pollen allergen Jun v 1 OS=Juniperus virginiana PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.835e-56
Identity = 111/236 (47.03%), Postives = 147/236 (62.29%), Query Frame = -3
Query:  144 LVMNSYKTIDGRGFNVQMSNG-PCISIYNVSNIIIHNIYIHDCVPA--GSAVVRDS----PKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQ 830
            L +  +KTIDGRG +V + NG PC+ +  VS++I+H ++IH C  +  G  +V +S    P H       DGD I++    + WIDH + S C DGLID+  GST ITISNN+ F+H++VML+GH D +  DK+M+VT+AFN FG    QRMPR R+G  H+ NN Y  W +YAIGGS+NPTI S+GN F A N+   KEVTK            W WRS  D   NGA+F  SG+
Sbjct:  105 LYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHGLHIHGCNTSVLGDVLVSESIGVVPVH-----AQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPNENYKKEVTKRIGCESTSACANWVWRSTRDAFSNGAYFVSSGK 335          
The following BLAST results are available for this feature:
BLAST of DT214568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
PEL3_ARATH8.795e-7255.65Probable pectate lyase 3 OS=Arabidopsis thaliana G... [more]
PEL19_ARATH1.500e-7156.09Putative pectate lyase 19 OS=Arabidopsis thaliana ... [more]
PEL59_SOLLC1.959e-7156.77Probable pectate lyase P59 OS=Solanum lycopersicum... [more]
PEL7_ARATH2.166e-7056.09Probable pectate lyase 7 OS=Arabidopsis thaliana G... [more]
PEL_TOBAC2.027e-6856.03Pectate lyase OS=Nicotiana tabacum PE=2 SV=1[more]
PEL4_ARATH4.994e-6752.40Probable pectate lyase 4 OS=Arabidopsis thaliana G... [more]
PEL56_SOLLC1.606e-6548.15Probable pectate lyase P56 OS=Solanum lycopersicum... [more]
PEL6_ARATH2.740e-6552.61Probable pectate lyase 6 OS=Arabidopsis thaliana G... [more]
MPAA2_AMBAR9.440e-5843.91Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia... [more]
MPAJ1_JUNVI8.835e-5647.03Major pollen allergen Jun v 1 OS=Juniperus virgini... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_23A09_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-23A09-A17-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214568 ID=DT214568; Name=DT214568; organism=Citrus sinensis; type=EST; length=835bp
GGTATAANCATTTGGTAGCAAAATTAGCAAGGTTGGCTATTCCGGCAACT
GAGCGTTCCGGCGGACGGAGAACTAGCAGTTAAAAGTGAAGTGGCCGGTC
TCGCAACCATGCTTGAAGCTTTCATGTAGCTTGCAGGAGTTTCTTGTCCA
GAAGGTGTAAAGAAAGCACCATTAAGCATCAGATCTCCTTCTGATCTCCA
ATTCCATTTCTTCCATTCATCATCTTCTGATATGATTTCATGTTTTGTCA
CCTCCTTGGTAGATTCGTCATTTGATGCTATGAAAACATTTCCTTGGCTA
TTGATTGTAGGATTAGCACTTCCTCCAATTGCATACATCTCCCACCCAGT
GTATATATTATTCACAATGTGAAAGAACCCATGTCGGCACCTGGGCATTC
TTTGAACAAGACCATCTCCGAAAAAATTGAAGGCAATGGTGACCTGCATA
TTCTTGTCAGCAGAGAAATCATCACTATGACCCATTAGCATGACTTCATT
GTGATGGAACATGTAGTTGTTTGAGATTGTTATGGCTGTAGAGCCATAAA
CAATGTCGATGAGTCCGTCATAGCAATGGGAGAAAGTACAGTGATCAATC
CAGATATCTCTTGAACCGAATATCGATATGCCATCTCCATCTGATCTGCC
TCTTGGTCCATAATGTTTCGGCGAGTCCCTCACCACAGCACTTCCTGCTG
GTACACAGTCATGTATGTAAATGTTATGTATGATGATGTTACTTACGTTG
TAAATTGATATGCATGGTCCATTTGACATTTGAACATTAAACCCTCTTCC
ATCTATGGTCTTGTATGAATTCATGACTAGTTCTT
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