DT214568

Overview
NameDT214568
Unique NameDT214568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNAS (Major pollen allergen Jun a 1 OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.835e-56
Identity = 109/232 (46.98%), Postives = 148/232 (63.79%), Query Frame = -3
Query:  144 LVMNSYKTIDGRGFNVQMSNG-PCISIYNVSNIIIHNIYIHDCVPA--GSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQ 830
            L +  +KTIDGRG +V + NG PC+ +  VS++I+H+++IH C  +  G  +V +S     P    DGD I++    + WIDH + S C DGLID+  GST ITISNN+ F+H++VML+GH D +  DK+M+VT+AFN FG    QRMPR R+G  H+ NN Y  W +YAIGGS+NPTI S+GN F A ++   KEVTK            W WRS  D  +NGA+F  SG+
Sbjct:  105 LYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIG-VEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTRDAFINGAYFVSSGK 335          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: MPAC1_CUPAR (Major pollen allergen Cup a 1 OS=Cupressus arizonica PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.968e-55
Identity = 110/232 (47.41%), Postives = 144/232 (62.07%), Query Frame = -3
Query:  144 LVMNSYKTIDGRGFNVQMSNG-PCISIYNVSNIIIHNIYIHDCVPA--GSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQ 830
            L +  YKTIDGRG  V + NG PC+ +   S++I+H ++IH C  +  G  +V +S     P    DGD I++    + WIDH + S C DGLID+  GST ITISNN+ F+H++VML+GH D +  DK+M+VT+AFN FG    QRMPR R+G  H+ NN Y  W +YAIGGS+NPTI S+GN F A N+   KEVTK            W WRS  D   NGA+F  SG+
Sbjct:   84 LYVAGYKTIDGRGAVVHLGNGGPCLFMRKASHVILHGLHIHGCNTSVLGDVLVSESIG-VEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDQWNIYAIGGSSNPTILSEGNSFTAPNESYKKEVTKRIGCETTSACANWVWRSTRDAFTNGAYFVSSGK 314          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: MPA13_AMBAR (Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.571e-55
Identity = 120/271 (44.28%), Postives = 154/271 (56.83%), Query Frame = -3
Query:   27 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDC--VPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSMVARXXXXXXXXXXXXXXXXSCRNSQPC 833
            ELV+NS KTIDGRG  V++ NG  +++ NV NIIIHNI IHD   +P G     D P     R  SDGD I++ GS  IWIDHC+ S  +DGL+D+  GST +TISN      ++ +L+G  D    DK M  T+AFN F D + QRMPRCR GFF +VNN Y  W  YAIGGS+ PTI  QGN F+A +D+  K V          E   WNWRS+ DL+ NGA F  SG +   + ++++ M+                  SC    PC
Sbjct:  131 ELVVNSDKTIDGRGVKVEIINGG-LTLMNVKNIIIHNINIHDVKVLPGGMIKSNDGPPIL--RQASDGDTINVAGSSQIWIDHCSLSKSFDGLVDVTLGSTHVTISNCKFTQQSKAILLGADDTHVQDKGMLATVAFNMFTDNVDQRMPRCRFGFFQVVNNNYDRWGTYAIGGSSAPTILCQGNRFLAPDDQIKKNVLARTGTGA-AESMAWNWRSDKDLLENGAIFVTSGSDPVLTPVQSAGMIPAEPGEAAIKLTSSAGVFSCHPGAPC 397          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: MPA11_AMBAR (Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.357e-55
Identity = 116/270 (42.96%), Postives = 155/270 (57.41%), Query Frame = -3
Query:   27 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVT-KHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSMVARXXXXXXXXXXXXXXXXSCRNSQPC 833
            E+V+NS KTIDGRG  V++ N    ++  V N+IIHNI +HD       +++ +     PR  SDGD ISI GS  IWIDHC+ S   DGL+D   G+T +T+SN+    H  V+L G  D+   D+ M  T+AFN F D + QRMPRCRHGFF +VNN Y  W  YAIGGSA+PTI SQGN F A ++ S K V  +H   +   E  KWNWR+  D++ NGA F  SG +   +  +++ M+                  SC+   PC
Sbjct:  130 EMVVNSDKTIDGRGAKVEIINAG-FTLNGVKNVIIHNINMHDVKVNPGGLIKSNDGPAAPRAGSDGDAISISGSSQIWIDHCSLSKSVDGLVDAKLGTTRLTVSNSLFTQHQFVLLFGAGDENIEDRGMLATVAFNTFTDNVDQRMPRCRHGFFQVVNNNYDKWGSYAIGGSASPTILSQGNRFCAPDERSKKNVLGRHGEAAA--ESMKWNWRTNKDVLENGAIFVASGVDPVLTPEQSAGMIPAEPGESALSLTSSAGVLSCQPGAPC 396          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: MPAC1_CHAOB (Major pollen allergen Cha o 1 OS=Chamaecyparis obtusa PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 9.769e-55
Identity = 107/225 (47.56%), Postives = 140/225 (62.22%), Query Frame = -3
Query:  144 KTIDGRGFNVQMSNG-PCISIYNVSNIIIHNIYIHDCVPAGSA-VVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQ 812
            KTIDGRG  V + NG PC+ +  VS++I+H + IH C  + S  V+        P    DGD I++    D+WIDH + S   DGL+D+   ST +TISNN+ F+H++VML+GHSD +S DK+M+VT+AFN FG    QRMPR R+G  H+ NN Y  W +YAIGGS+NPTI S+GN F A ND   KEVT+            W WRS  D   NGA+F  SG+
Sbjct:  111 KTIDGRGAEVHIGNGGPCLFMRTVSHVILHGLNIHGCNTSVSGNVLISEASGVVPVHAQDGDAITMRNVTDVWIDHNSLSDSSDGLVDVTLASTGVTISNNHFFNHHKVMLLGHSDIYSDDKSMKVTVAFNQFGPNAGQRMPRARYGLIHVANNNYDPWSIYAIGGSSNPTILSEGNSFTAPNDSDKKEVTRRVGCESPSTCANWVWRSTQDSFNNGAYFVSSGK 335          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: MPA12_AMBAR (Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.666e-54
Identity = 121/271 (44.65%), Postives = 151/271 (55.72%), Query Frame = -3
Query:   27 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDC--VPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSMVARXXXXXXXXXXXXXXXXSCRNSQPC 833
            ELV+NS KTIDGRG  V + N   +++ NV NIIIHNI IHD    P G     D P     R +SDGD I++ GS  IWIDHC+ S   DGL+DI  GS+ +T+SN     H  V+L+G  D    DK M  T+AFN F D + QRMPRCR GFF +VNN Y  W  YAIGGS+ PTI SQGN F A +D   K V      + + E   WNWR++ DL+ NGA F PSG +   +  + + M+                  SC    PC
Sbjct:  132 ELVVNSDKTIDGRGVKVNIVNAG-LTLMNVKNIIIHNINIHDIKVCPGGMIKSNDGPPIL--RQQSDGDAINVAGSSQIWIDHCSLSKASDGLLDITLGSSHVTVSNCKFTQHQFVLLLGADDTHYQDKGMLATVAFNMFTDHVDQRMPRCRFGFFQVVNNNYDRWGTYAIGGSSAPTILSQGNRFFAPDDIIKKNVLA-RTGTGNAESMSWNWRTDRDLLENGAIFLPSGSDPVLTPEQKAGMIPAEPGEAVLRLTSSAGVLSCHQGAPC 398          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: SBP_CRYJA (Sugi basic protein OS=Cryptomeria japonica PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 3.712e-54
Identity = 105/229 (45.85%), Postives = 147/229 (64.19%), Query Frame = -3
Query:  144 YKTIDGRGFNVQMSNG-PCISIYNVSNIIIHNIYIHDCVPA--GSAVVRDSPKHYG--PRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQ 815
            YKT DGRG  V + NG PC+ I  VSN+IIH ++++ C  +  G+ ++ +S   +G  P    DGD +++  + +IWIDH +FS+  DGL+D+   ST +TISNN  F+H++VML+GH D +S DK+M+VT+AFN FG    QRMPR R+G  H+ NN Y  W +YAIGGS+NPTI S+GN F A N+   K+VT             W W+S  D+  NGA+F  SG+
Sbjct:  110 YKTFDGRGAQVYIGNGGPCVFIKRVSNVIIHGLHLYGCSTSVLGNVLINES---FGVEPVHPQDGDALTLRTATNIWIDHNSFSNSSDGLVDVTLSSTGVTISNNLFFNHHKVMLLGHDDAYSDDKSMKVTVAFNQFGPNCGQRMPRARYGLVHVANNNYDPWTIYAIGGSSNPTILSEGNSFTAPNESYKKQVTIRIGCKTSSSCSNWVWQSTQDVFYNGAYFVSSGK 335          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: MPA14_AMBAR (Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 9.462e-50
Identity = 119/271 (43.91%), Postives = 145/271 (53.51%), Query Frame = -3
Query:   27 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCV--PAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSHCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWRSEGDLMLNGAFFTPSGQETPASYMKASSMVARXXXXXXXXXXXXXXXXSCRNSQPC 833
            EL +N+ KTIDGRG  V++ N    +IYNV NIIIHNI +HD V  P G     D P    PR  SDGD I I G   IWIDHC+ S   DGLID  +GST  T+SN     H  ++L    D    ++ M  T+AFN F D + QRMP  RHGF  +VNN Y  W  YA+GGSA PTI SQGN F+AS  +  KEV      S   E   WNWRS  D+  NGA F PSG +   +  + + M+                  SC+   PC
Sbjct:  131 ELAINNDKTIDGRGAKVEIINAG-FAIYNVKNIIIHNIIMHDIVVNPGGLIKSHDGPP--VPRKGSDGDAIGISGGSQIWIDHCSLSKAVDGLIDAKHGSTHFTVSNCLFTQHQYLLLFWDFD----ERGMLCTVAFNKFTDNVDQRMPNLRHGFVQVVNNNYERWGSYALGGSAGPTILSQGNRFLAS--DIKKEVVGRYGESAMSESINWNWRSYMDVFENGAIFVPSGVDPVLTPEQNAGMIPAEPGEAVLRLTSSAGVLSCQPGAPC 392          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PELA_DICD3 (Pectate lyase A OS=Dickeya dadantii (strain 3937) GN=pelA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.190e-17
Identity = 65/215 (30.23%), Postives = 101/215 (46.98%), Query Frame = -3
Query:  255 TIDGRGFNVQMSNGPCI--SIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHY--GPRGRSDGDGISIF-GSRDIWIDHCTFSHC-----------------YDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSA-DKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTG-------WEMYAIGGSANPTINSQGNVFIASNDESTK 809
            T+ G G + +  NG  I       +N+II N+YI   +        D   HY  G    ++ DG++I  G+  +W+DH T S                   +DG +DI  GS  +TISN+    H++ ML+GHSD  SA DK       FN   + + +R PR R+G  H  NN++ G         +Y+ G   + ++ S+GN F  +N  ++K
Sbjct:  121 TVIGIGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPI--------DVEPHYEKGDGWNAEWDGMNITNGAHHVWVDHVTISDGSFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLFDQHDKTMLIGHSDTNSAQDKGKLHVTLFNNVFNRVTERAPRVRYGSIHSFNNVFNGDVKDPVYRYLYSFGIGTSGSVLSEGNSFTIANLSASK 327          
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PELD_ERWCH (Pectate lyase D OS=Erwinia chrysanthemi GN=pelD PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.056e-16
Identity = 67/218 (30.73%), Postives = 102/218 (46.79%), Query Frame = -3
Query:  261 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHY--GPRGRSDGDGISIFGSRDIWIDHCTFSHC-----------------YDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAF-NFFGDGLVQRMPRCRHGFFHIVNNIYTG-------WEMYAIGGSANPTINSQGNVFIASNDES 833
            ++ + S  TI G G N + +NG  + I  VSN+I+ N+YI   V        D   HY  G    ++ D   I  S  +W+DH T S                   +DG +DI  GS  +TIS++    H++ +L+GHSD   +  + ++ + F N   D + +R PR R G  H  NN+Y G         +Y+ G   + TI S+ N F  SN +S
Sbjct:  111 QISVPSNTTIIGIGSNGKFTNGSLV-IKGVSNVILRNLYIETPV--------DVAPHYEEGDGWNAEWDAAVIDNSTRVWVDHVTISDGSFTDDKYTTKNGEKYVQHDGALDIKKGSDYVTISSSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERTPRVRFGSIHAYNNVYLGDVKNSVYPYLYSFGLGTSGTILSESNSFTLSNLKS 319          
The following BLAST results are available for this feature:
BLAST of DT214568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
MPAJ1_JUNAS8.835e-5646.98Major pollen allergen Jun a 1 OS=Juniperus ashei P... [more]
MPAC1_CUPAR1.968e-5547.41Major pollen allergen Cup a 1 OS=Cupressus arizoni... [more]
MPA13_AMBAR2.571e-5544.28Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifol... [more]
MPA11_AMBAR3.357e-5542.96Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifol... [more]
MPAC1_CHAOB9.769e-5547.56Major pollen allergen Cha o 1 OS=Chamaecyparis obt... [more]
MPA12_AMBAR1.666e-5444.65Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifol... [more]
SBP_CRYJA3.712e-5445.85Sugi basic protein OS=Cryptomeria japonica PE=1 SV... [more]
MPA14_AMBAR9.462e-5043.91Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifol... [more]
PELA_DICD36.190e-1730.23Pectate lyase A OS=Dickeya dadantii (strain 3937) ... [more]
PELD_ERWCH1.056e-1630.73Pectate lyase D OS=Erwinia chrysanthemi GN=pelD PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_23A09_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-23A09-A17-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214568 ID=DT214568; Name=DT214568; organism=Citrus sinensis; type=EST; length=835bp
GGTATAANCATTTGGTAGCAAAATTAGCAAGGTTGGCTATTCCGGCAACT
GAGCGTTCCGGCGGACGGAGAACTAGCAGTTAAAAGTGAAGTGGCCGGTC
TCGCAACCATGCTTGAAGCTTTCATGTAGCTTGCAGGAGTTTCTTGTCCA
GAAGGTGTAAAGAAAGCACCATTAAGCATCAGATCTCCTTCTGATCTCCA
ATTCCATTTCTTCCATTCATCATCTTCTGATATGATTTCATGTTTTGTCA
CCTCCTTGGTAGATTCGTCATTTGATGCTATGAAAACATTTCCTTGGCTA
TTGATTGTAGGATTAGCACTTCCTCCAATTGCATACATCTCCCACCCAGT
GTATATATTATTCACAATGTGAAAGAACCCATGTCGGCACCTGGGCATTC
TTTGAACAAGACCATCTCCGAAAAAATTGAAGGCAATGGTGACCTGCATA
TTCTTGTCAGCAGAGAAATCATCACTATGACCCATTAGCATGACTTCATT
GTGATGGAACATGTAGTTGTTTGAGATTGTTATGGCTGTAGAGCCATAAA
CAATGTCGATGAGTCCGTCATAGCAATGGGAGAAAGTACAGTGATCAATC
CAGATATCTCTTGAACCGAATATCGATATGCCATCTCCATCTGATCTGCC
TCTTGGTCCATAATGTTTCGGCGAGTCCCTCACCACAGCACTTCCTGCTG
GTACACAGTCATGTATGTAAATGTTATGTATGATGATGTTACTTACGTTG
TAAATTGATATGCATGGTCCATTTGACATTTGAACATTAAACCCTCTTCC
ATCTATGGTCTTGTATGAATTCATGACTAGTTCTT
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