DT214568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PELA_ERWCH (Pectate lyase A OS=Erwinia chrysanthemi GN=pelA PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.844e-16 Identity = 64/215 (29.77%), Postives = 100/215 (46.51%), Query Frame = -3 Query: 255 TIDGRGFNVQMSNGPCI--SIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHY--GPRGRSDGDGISIF-GSRDIWIDHCTFSHC-----------------YDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSA-DKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTG-------WEMYAIGGSANPTINSQGNVFIASNDESTK 809 T+ G G + + NG I +N+II N+YI + D HY G ++ D ++I G+ +WIDH T S +DG +DI GS +TISN+ + H++ ML+GH+D SA DK FN + + +R PR R+G H NN++ G Y+ G + ++ S+GN F +N ++K Sbjct: 122 TVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPI--------DVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHNDTNSAQDKGKLHVTLFNNVFNRVTERAPRVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASK 328
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PELE1_ERWCH (Pectate lyase E OS=Erwinia chrysanthemi GN=pelE PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.938e-16 Identity = 65/218 (29.82%), Postives = 101/218 (46.33%), Query Frame = -3 Query: 261 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHY--GPRGRSDGDGISIFGSRDIWIDHCTFSHC-----------------YDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAF-NFFGDGLVQRMPRCRHGFFHIVNNIYTG-------WEMYAIGGSANPTINSQGNVFIASNDES 833 ++ + S TI G G N + +NG + I V N+I+ N+YI V D HY G ++ D I S ++W+DH T S +DG +DI GS +TIS + H++ +L+GHSD + + ++ + F N D + +R PR R G H NN+Y G +Y+ G + +I S+ N F SN +S Sbjct: 105 QISIPSNTTIIGVGSNGKFTNGSLV-IKGVKNVILRNLYIETPV--------DVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVRFGSIHAYNNVYLGDVKHSVYPYLYSFGLGTSGSILSESNSFTLSNLKS 313
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PELE_DICD3 (Pectate lyase E OS=Dickeya dadantii (strain 3937) GN=pelE PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.794e-15 Identity = 71/259 (27.41%), Postives = 119/259 (45.95%), Query Frame = -3 Query: 147 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHY--GPRGRSDGDGISIFGSRDIWIDHCTFSHC-----------------YDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADK--NMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTG-------WEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWR--SEGDLMLNGAFFTPSG 833 ++ + S TI G G + +NG + + VSN+I+ N+YI V D HY G ++ D + I + +W+DH T S +DG +DI GS +T+SN+ H++ +L+GHSD+ + ++VT N F D + +R PR R G H NN+Y G Y+ G + ++ S+ N F N K+++ + E K +N + S+ ++NGA + +G Sbjct: 123 QISIPSNTTIIGIGNKGKFTNGSLV-VKGVSNVILRNLYIETPV--------DVAPHYEEGDGWNAEWDAVVIDSTDHVWVDHVTISDGSLTDDKYTTKNGEKYVQHDGSLDIKRGSDYVTVSNSRFELHDKTILIGHSDNNGSQDAGKLRVTFHNNLF-DRVGERTPRVRFGSVHAYNNVYVGDVNHKAYRYQYSFGIGTSGSLLSESNAFTIDN---MKKISGRD--KECSVVKAFNGKIFSDKGSIINGASYNLNG 366
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PELE2_ERWCH (Pectate lyase E OS=Erwinia chrysanthemi GN=pelE PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.794e-15 Identity = 71/259 (27.41%), Postives = 119/259 (45.95%), Query Frame = -3 Query: 147 ELVMNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHY--GPRGRSDGDGISIFGSRDIWIDHCTFSHC-----------------YDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADK--NMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTG-------WEMYAIGGSANPTINSQGNVFIASNDESTKEVTKHEIISEDDEWKKWNWR--SEGDLMLNGAFFTPSG 833 ++ + S TI G G + +NG + + VSN+I+ N+YI V D HY G ++ D + I + +W+DH T S +DG +DI GS +T+SN+ H++ +L+GHSD+ + ++VT N F D + +R PR R G H NN+Y G Y+ G + ++ S+ N F N K+++ + E K +N + S+ ++NGA + +G Sbjct: 123 QISIPSNTTIIGIGNKGKFTNGSLV-VKGVSNVILRNLYIETPV--------DVAPHYEEGDGWNAEWDAVVIDSTDHVWVDHVTISDGSFTDDKYTTKNGEKYVQHDGSLDIKRGSDYVTVSNSRFELHDKTILIGHSDNNGSQDAGKLRVTFHNNLF-DRVGERTPRVRFGSVHAYNNVYVGDVNHKAYRYQYSFGIGTSGSLLSESNAFTIDN---MKKISGRD--KECSVVKAFNGKIFSDKGSIINGASYNLNG 366
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PELB_COLGL (Pectate lyase B OS=Colletotrichum gloeosporioides GN=PLB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.082e-13 Identity = 65/226 (28.76%), Postives = 100/226 (44.25%), Query Frame = -3 Query: 186 MNSYKTIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFSH--------CYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADK--NMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWEMYAIGGSANPTINSQGNVFIASNDEST---KEVTKHEIISEDDEWKKWNWRSEG 824 + S K+I GR + G + I N+I+ N+ I S V+ D+ GD I I S +W+DHC S YDGL+DI + S A+T+SN Y+ H + L+GHSD SA+ + VT A N + + + R P R G HI NN E + + + +VF + T + T + ++++ D N R +G Sbjct: 96 VGSNKSIIGRAGSSLTGVG--LYINKQENVIVRNMKI-------SKVLADN-----------GDRIGIQASSKVWVDHCDLSSDKKNNGKDYYDGLLDITHASMAVTVSNTYIHDHYKGSLVGHSDSNSAEDTGKLYVTYANNHWYN-VASRNPSVRFGNVHIFNNYAEKLETSGVNTRMGAQLLIESSVFSDTKKAVTFLDSKSTGYAVVNDVDLGGSTNDRPQG 300
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL_BACSU (Pectate lyase OS=Bacillus subtilis GN=pel PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.691e-12 Identity = 65/219 (29.68%), Postives = 89/219 (40.64%), Query Frame = -3 Query: 246 TIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDG------DGISIFGSRDIWIDHCTFS-----------------HCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDD-FSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWE-------MYAIGGSANPTINSQGNVFIASNDESTKEVT 809 TI G G N ++ G N+II NI D D + P S G D I+I G IWIDHCTF+ +DG D G+ IT+S NY H++ + G SD S D +++T+ N + +VQR PR R G H+ NN Y G YA G + I +Q NV + K ++ Sbjct: 151 TIVGSGTNAKVVGGNFQ--IKSDNVIIRNIEFQDAY--------DYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRY-KNIVQRAPRVRFGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVPGLSAAKTIS 358
BLAST of DT214568 vs. ExPASy Swiss-Prot
Match: PEL_PSEMA (Pectate lyase OS=Pseudomonas marginalis GN=pel PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.886e-11 Identity = 53/200 (26.50%), Postives = 85/200 (42.50%), Query Frame = -3 Query: 282 TIDGRGFNVQMSNGPCISIYNVSNIIIHNIYIHDCVPAGSAVVRDSPKHYGPRGRSDGDGISIFGSRDIWIDHCTFS-----------------HCYDGLIDIVYGSTAITISNNYMFHHNEVMLMGHSDDFSADKNMQVTIAFNFFGDGLVQRMPRCRHGFFHIVNNIYTGWE-------MYAIGGSANPTINSQGNVF 809 TI G G N ++ G + N ++II NI + + P + D S+ DG+++ G+ ++W+DH TF+ +DG +D+ G+ +TIS + H + L+G SD + D N + + R PR R+G H+ NN + G YA G N I S+ N F Sbjct: 116 TIVGIGSNAEIREGFFYAKEN--DVIIRNITVEN--PWDPEPIFDKDDGADGNWNSEYDGLTVEGANNVWVDHVTFTDGRRTDDQNGTEHERPKQHHDGALDVKNGANFVTISYSVFKSHEKNNLIGSSDSRTTDDGKLKVTIHNTLFENISARAPRVRYGQVHLYNNYHVGSTSHKVYPFSYAHGVGKNSKIFSERNAF 311 The following BLAST results are available for this feature:
BLAST of DT214568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214568 ID=DT214568; Name=DT214568; organism=Citrus sinensis; type=EST; length=835bpback to top |