DT214566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBE_HUMAN (Tubulin epsilon chain OS=Homo sapiens GN=TUBE1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.666e-13 Identity = 42/122 (34.43%), Postives = 69/122 (56.56%), Query Frame = -2 Query: 258 YLTASAMFRGKMSTKEVDEQMLNVQN-KNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 617 YL + M RG + ++ + N++ K S FV W K+++C +PP G + + N+T ++ F + E+F ++++KA LH Y EGM+E FTEA S+++ L+ EY Q DAT Sbjct: 343 YLACALMVRGNV---QISDLRRNIERLKPSLQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL-DAT 460
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA_GIBZE (Tubulin alpha chain OS=Gibberella zeae GN=TUB1 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.262e-12 Identity = 35/124 (28.23%), Postives = 64/124 (51.61%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGL--------KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ ++RG + + + ++ K + FV+W P K +C P + A + N+T+I E + +S +F M ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 311 KYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQAPENVPNGDLAKVSRAVCMLSNTTAIAEAWSSLSLKFDLMHSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA_DICPU (Tubulin alpha chain (Fragment) OS=Dictyostelium purpureum GN=tuba PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.262e-12 Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = -2 Query: 324 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSY--FVEWIPNNVKSTVCDIPPT------GLKMAST-----FIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 620 +Y+ M+RG + KE + + N++N+ S FV+W P K + + PT G MA T + N+T+I ++F R++ +F M+ ++AF+HWY GEGM+E E Sbjct: 220 KYMACCLMYRGNIVPKEAQKAVQNIRNEKSKTVSFVDWSPTGFKCGINNSKPTTVLGENGDNMARTEKSVCMLSNTTAISQVFSRINHKFDLMYIKRAFVHWYVGEGMEEGE 331
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA2_EMENI (Tubulin alpha-2 chain OS=Emericella nidulans GN=tubB PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.649e-12 Identity = 36/124 (29.03%), Postives = 69/124 (55.65%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT---GLKMAS-----TFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ + ++RG ++ + + +++ K S VEW P K + P G ++A + + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 313 KYMAVALLYRGDCVPRDCTQAIASLKAKASFNLVEWCPTGFKVGINYQKPARVPGSELAPVDRSVSMLSNTTAISEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 436
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBE_MOUSE (Tubulin epsilon chain OS=Mus musculus GN=Tube1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.265e-12 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = -2 Query: 258 YLTASAMFRGKMSTKEVDEQMLNVQN-KNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG-EGMDEMEFTEAESNMNDLVSEYQQYQDAT 617 YL + + RG + ++ + N++ K + FV W K+++C +PP G + + N+T ++ F + E+FT ++++KA LH Y +GM+E FTEA S+++ L+ EY DAT Sbjct: 343 YLACALIVRGNV---QISDLRRNIERLKPALQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELRERFTRLYKKKAHLHHYLQVDGMEESTFTEAVSSLSALIQEYSDL-DAT 460 The following BLAST results are available for this feature:
BLAST of DT214566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214566 ID=DT214566; Name=DT214566; organism=Citrus sinensis; type=EST; length=861bpback to top |