DT214526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_NEUCR (40S ribosomal protein S26E OS=Neurospora crassa GN=rps-26 PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 5.112e-28 Identity = 57/106 (53.77%), Postives = 69/106 (65.09%), Query Frame = -2 Query: 212 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRD 529 M KR+N G NK GRGHV IRCSNC +C PKDKAIKRF +RN+VE AA+RD+ DA ++ Y +PK+Y K+QYCVSCAIH R PP R +D Sbjct: 1 MVKKRKNNGRNKKGRGHVKPIRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYTVPKMYLKLQYCVSCAIHGKIVRVRSREGRRNRAPPPRVRYNKD 106
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26L_HUMAN (Putative 40S ribosomal protein S26-like 1 OS=Homo sapiens GN=RPS26P11 PE=5 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.139e-27 Identity = 64/120 (53.33%), Postives = 75/120 (62.50%), Query Frame = -2 Query: 170 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRP 529 MT KRRN K GRGHV IRC+NC +C P DKAIK+F++RNIVE AAVRD+ + ++D YVLPKLY K+ YCVSCAIHS R PP RF +P G APRP Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPPPRF--------RPA--GAAPRP 110
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26B_YEAST (40S ribosomal protein S26-B OS=Saccharomyces cerevisiae GN=RPS26B PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.290e-25 Identity = 57/111 (51.35%), Postives = 67/111 (60.36%), Query Frame = -2 Query: 197 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKP 529 M KR + G NK GRGHV +RC NC K PKDKAIKR +RNIVE AAVRD+ +A +Y Y LPK Y K+ YCVSCAIH+ R PP+R RD+ P Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQRPRFNRDNKVSP 111
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_DICDI (40S ribosomal protein S26 OS=Dictyostelium discoideum GN=rps26 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.178e-24 Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = -2 Query: 284 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYD--NYVLPKLYAKMQYCVSCAIHSH 529 MT KRRN G +KHGRG V +IRC+NC +C PKDKA+KRF +R IVE AAV+D+ D +++ Y P+ Y K QYC+SCAIHSH Sbjct: 1 MTQKRRNHGRSKHGRGSVPYIRCTNCARCVPKDKAVKRFYIRPIVENAAVKDISDQGVFNVKGYKFPRTYVKSQYCISCAIHSH 84
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26A_YEAST (40S ribosomal protein S26-A OS=Saccharomyces cerevisiae GN=RPS26A PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.539e-24 Identity = 56/111 (50.45%), Postives = 67/111 (60.36%), Query Frame = -2 Query: 197 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKP 529 M KR + G NK GRGHV +RC NC K PKDKAIKR +RNIVE AAVRD+ +A +Y Y LPK Y K+ YCVSCAIH+ R PP+R R++ P Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQRPRFNRENKVSP 111
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_OXYNO (40S ribosomal protein S26 OS=Oxytricha nova GN=RPS26 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.491e-19 Identity = 42/83 (50.60%), Postives = 59/83 (71.08%), Query Frame = -2 Query: 287 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIY--DNYVLPKLYAKMQYCVSCAIHS 529 M KRRN G NK +GH + +RC+NCG+ KDKAIKRF RN+V+ ++ RD+Q+ Y ++ +PK+Y K+ YCVSCAIH+ Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYAQSDFTMPKIYVKLSYCVSCAIHA 83
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_ENCCU (40S ribosomal protein S26 OS=Encephalitozoon cuniculi GN=RPS26 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.489e-16 Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = -2 Query: 287 RRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHS 517 RRN G K RG I+C CG PKDKAIKRF +++++EQA+ D++ A IYD + +P++ K Q+CVSCA H+ Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEVPRMGYKSQFCVSCACHA 78 The following BLAST results are available for this feature:
BLAST of DT214526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DT214526 ID=DT214526; Name=DT214526; organism=Citrus sinensis; type=EST; length=575bpback to top |