DT214516

Overview
NameDT214516
Unique NameDT214516
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-4cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2447 contig Csv1_Contig2447:46..825. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DT214516 vs. ExPASy Swiss-Prot
Match: LGT_CITUN (Limonoid UDP-glucosyltransferase OS=Citrus unshiu PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.150e-15
Identity = 53/173 (30.64%), Postives = 90/173 (52.02%), Query Frame = -3 
Query:  218 SAKSFIWVIRPPIGFDLRGEFRSEWLPEGFEERIKEVKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVIESLSQGVPVIGWPMAAEQAYNSKMLVEEMGVAVELTRG-VQSTIVGHEVENVIEMVMDKAGKGQEMKEKAEKIGRQIRGSMIEDGEDRGSSLKGLDDFVRSI 733
            S  SF+WV++PP         +   LP+GF E++ +  +G +V+ W+PQ ++L+H S   F++HCGWNS +ESL+ GVPVI +P   +Q  ++  L +     + L RG  ++ I+  +      +      K   ++E A K  ++      E   D GSS + +  FV  +
Sbjct:  302 SGISFLWVMKPP---PEDSGVKIVDLPDGFLEKVGD--KGKVVQ-WSPQEKVLAHPSVACFVTHCGWNSTMESLASGVPVITFPQWGDQVTDAMYLCDVFKTGLRLCRGEAENRIISRDEVEKCLLEATAGPKAVALEENALKWKKEAE----EAVADGGSSDRNIQAFVDEV 464
[Close]
BLAST of DT214516 vs. ExPASy Swiss-Prot
Match: UFOG_HORVU (Anthocyanidin 3-O-glucosyltransferase OS=Hordeum vulgare GN=BZ1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.957e-14
Identity = 54/183 (29.51%), Postives = 85/183 (46.45%), Query Frame = -3 
Query:  218 KLMALVIGLEASAKSFIWVIRPPIGFDLRGEFRSEWLPEGFEERIKEVKQGLLVRNWAPQLEILSHKSTGAFLSHCGWNSVIESLSQGVPVIGWPMAAEQAYNSKMLVEEMGVAVELTRGVQSTIVGHEVENVIEMVMDKAGKGQEMKEKAEKIGRQIRGSMIEDGEDRGSSLKGLDDFVRSI 766
            +L  L  GLEAS   F+W +R  +             P GF ER      GL+V  WAPQ+ +L H + GAF++H GW SV+E +S GVP+   P   +Q  N++ +    G        +    V + V  ++     +   G+ M+ KA+++   +  +   DG  R    K  D+FV  +
Sbjct:  294 ELQELAAGLEASGAPFLWSLRGVVAA----------APRGFLERAP----GLVVP-WAPQVGVLRHAAVGAFVTHAGWASVMEGVSSGVPMACRPFFGDQTMNARSVASVWGFGTAFDGPMTRGAVANAVATLL-----RGEDGERMRAKAQELQAMVGKAFEPDGGCR----KNFDEFVEIV 452
The following BLAST results are available for this feature:
BLAST of DT214516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
LGT_CITUN5.150e-1530.64Limonoid UDP-glucosyltransferase OS=Citrus unshiu ... [more]
UFOG_HORVU1.957e-1429.51Anthocyanidin 3-O-glucosyltransferase OS=Hordeum v... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_36E04_b2 Parent Washington Navel Orange Callus cDNA Library UCRCS08-4 Citrus sinensis cDNA clone UCRCS08-36E04-J8-1-4.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214516 ID=DT214516; Name=DT214516; organism=Citrus sinensis; type=EST; length=780bp
ATATTGATGCCTATATAATAATGCACAGAAAAAGCAGATGAAATTGGAAA
CTCCTGCATTTATCAAATTGTTCGAAAAAGAAGGTAACGCACGCAAACAA
CTGATAAGACTTTGCACATTGCAACTCCAAATACAATTATTAAGTTAGGG
GAAGACTTATTACCTCAATTGTCTGCAATGTGGGATATTACACCGATTGA
TCTTGTCTTCTTAACAAAATGGACCTAACAAAATCATCCAATCCTTTTAA
AGAGGATCCTCTGTCTTCTCCATCCTCTATCATTGATCCCCTTATTTGCC
TTCCAATTTTTTCAGCTTTCTCCTTCATTTCTTGCCCCTTCCCTGCCTTG
TCCATCACCATTTCTATCACATTTTCCACCTCGTGTCCTACAATCGTACT
TTGAACTCCTCTTGTCAACTCTACAGCCACCCCCATTTCCTCAACAAGCA
TCTTTGAATTATAAGCCTGCTCTGCTGCCATTGGCCAACCAATCACTGGC
ACTCCTTGGCTTAAACTTTCTATCACTGAATTCCAGCCACAGTGGCTCAA
GAATGCTCCTGTTGATTTGTGTGACAAAATCTCCAACTGGGGTGCCCAGT
TTCTCACCAACAAACCTTGTTTAACTTCTTTGATTCTTTCTTCAAATCCC
TCAGGCAACCATTCTGATCTAAATTCACCTCTCAAGTCAAAACCAATAGG
CGGCCTAATGACCCAGATGAAAGATTTAGCACTTGCTTCCAAACCAATGA
CCAGTGCCATCAATTTGGGATGAACTTATT
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