DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BART1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.506e-29 Identity = 62/136 (45.59%), Postives = 88/136 (64.71%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG+V EG +AL+ +G + L+A L G+ TVADARF KPLD L+R L + H L+T+EEG++GGFG+H+ F+A +GLL+ G+K R + PD Y+ H SP + L+ GL I T L+++GR Sbjct: 495 EIGKGRVLREGNRIALVCFGTRMSEVLRAADRLGAKGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKFPDEYLNHGSPEKVLSTIGLDAMGIVNTVLTVVGR 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BRASB (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=dxs PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.191e-29 Identity = 63/135 (46.67%), Postives = 86/135 (63.70%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGKG++ +GK VALL +G + C KA L+ G+ ++ADARF KPLD +LV +L + H LIT+EEGS+GGFGSHV ++A G+LD G+K R +VLPD + +H +P A AGL I LG+ Sbjct: 497 IGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELVLKLAREHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGK 631
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SILST (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter sp. (strain TM1040) GN=dxs PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.392e-29 Identity = 63/138 (45.65%), Postives = 87/138 (63.04%), Query Frame = -2 Query: 179 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 592 EIGKG++ EG VALL +G + KA L+ GI TVADARF KPLD ++ L + H LIT+EEG++GGFGSHV+ ++ + + D+G+K+R +VLPD +I+ ASP A + HI A L +LG R Sbjct: 499 EIGKGRIIEEGSRVALLSFGTRLGEVRKAAEALAARGITPTVADARFAKPLDRDMILSLAEKHEALITIEEGAVGGFGSHVAQLLSEEAVFDTGLKFRSMVLPDTFIDQASPKDMYDSAAMNAEHIEAKVLDVLGVAR 636
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SILPO (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter pomeroyi GN=dxs PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.602e-28 Identity = 63/135 (46.67%), Postives = 88/135 (65.19%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIGKG++ +G VALL +G + KA L+ GI T+ADARF KPLD L+ L +H LIT+EEG++GGFGSHV+ +A +G+ D G+K+R +VLPD +I+ +SP A+AG+ I A L +LG Sbjct: 499 EIGKGRMIQKGARVALLSFGTRLTEVQKAAEALAARGITPTIADARFAKPLDRDLILNLAHDHEALITIEEGAVGGFGSHVAQLLADEGVFDHGLKFRSMVLPDIFIDQSSPADMYAVAGMNAPQIEAKVLDVLG 633
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS1_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28 Identity = 63/133 (47.37%), Postives = 85/133 (63.91%), Query Frame = -2 Query: 191 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 589 IGKG++ EGK VALL G +Q+CL+A +L+ G+ TVADARF KP D +LV +L H LI VEEG++GGFG+HV+ ++ GLLD G+K R + +PD + EH +P Q A AG+ I L L Sbjct: 498 IGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFGAHVATWLTNQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PELUB (1-deoxy-D-xylulose-5-phosphate synthase OS=Pelagibacter ubique GN=dxs PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.569e-28 Identity = 61/134 (45.52%), Postives = 86/134 (64.18%), Query Frame = -2 Query: 191 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 592 EIGKG+V EGK V +L G ++ C A A L GI+ T+ DARF KPLD +L+ + + H +ITVEEGS+GGFGSHV + ++ G+ D G+K+R ++LPD +IE SP + +AGL I+ L +L Sbjct: 493 EIGKGRVIQEGKQVCILSIGTRLEECKIAAAELKNKGIESTIVDARFAKPLDQELILKCAREHEAMITVEEGSIGGFGSHVENLLSEKGIFDKGLKFRTMILPDIFIEQDSPKKMYDVAGLNASQISKKILDIL 626
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BARHE (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella henselae GN=dxs PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.569e-28 Identity = 63/136 (46.32%), Postives = 86/136 (63.24%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG++ EG +AL+ +G + L A LS G+ TVADARF KPLD L+R L + H L+T+EEG++GGFG+H+ F+A +GLL+ G+K R + LPD Y+ H S + L+ GL I T S LGR Sbjct: 495 EIGKGRILHEGNRIALVCFGTRISEVLVAADELSAEGLSTTVADARFAKPLDKDLMRRLAREHEVLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKLPDEYLNHGSQEKVLSRIGLDAVGIVNTVFSALGR 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS2_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs2 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.661e-28 Identity = 64/133 (48.12%), Postives = 85/133 (63.91%), Query Frame = -2 Query: 191 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 589 IGKG++ EGK VALL G +Q+CL+A +L+ G+ TVADARF KP D +LV +L H LI VEEG++GGF SHV+ ++A GLLD G+K R + +PD + EH +P Q A AG+ I L L Sbjct: 498 IGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_NITHX (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dxs PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.313e-27 Identity = 64/136 (47.06%), Postives = 85/136 (62.50%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGKG++ +G VALL G + C KA L+ G+ T+ADARF KPLD+ LV +L ++H LIT+EEGS+GGFGSHV +A G LDSG V+ R +VLPD +++H +P A GL I A LG+ Sbjct: 523 IGKGRIVRQGSKVALLSLGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLVLKLARDHDVLITIEEGSIGGFGSHVMQTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDRGIVAKVFEALGK 658
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_NITWN (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dxs PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.946e-27 Identity = 61/136 (44.85%), Postives = 85/136 (62.50%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGKG++ +G +ALL +G + C KA L+ G+ T+ADARF KPLD+ L +L + H LIT+EEGS+GGFGSHV + +G LD G V+ R ++LPD +++H +PT A AGL I A LG+ Sbjct: 521 IGKGRIVRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLALKLAREHDVLITIEEGSIGGFGSHVMQTLMDNGALDGGLVRVRSMILPDEFLDHDTPTAMYARAGLDAKGIVAKVFEALGK 656 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |