DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_MARMM (1-deoxy-D-xylulose-5-phosphate synthase OS=Maricaulis maris (strain MCS10) GN=dxs PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.946e-27 Identity = 62/136 (45.59%), Postives = 83/136 (61.03%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG++ EG +A+L G ++ LKA L+ G TVADARF KPLD L+ L + H LITVEEG++GGFG+ V H +A G LD G++ R + LPD + + +P AGL HIAA AL +G+ Sbjct: 493 EIGKGRIVREGSRIAILSLGTRLEESLKAADALAAQGFSTTVADARFAKPLDEDLILRLAREHEVLITVEEGAVGGFGAFVLHMLADKGALDRGLRIRTLTLPDVFQDQEAPFDMYETAGLNARHIAAKALEAMGK 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BARBK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dxs PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.946e-27 Identity = 66/142 (46.48%), Postives = 87/142 (61.27%), Query Frame = -2 Query: 170 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG-RTREAL 592 EIGKG+V EG VAL+ +G + L A L+ GI TVADARF KPLD L+R L + H IT+EEG++GGFG+HV F+A + LL+ G+K R + LPD Y+ H SP + L+ GL I + LG TR+ L Sbjct: 495 EIGKGRVLREGSRVALVCFGTQLSEVLVAADELAAEGISTTVADARFAKPLDKDLMRRLAREHEVFITIEEGAIGGFGAHVLQFLAQEALLEHGLKVRTLRLPDEYLNHGSPEKILSRVGLDAKGIINAVFTSLGYETRKTL 636
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BARQU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana GN=dxs PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.731e-27 Identity = 63/136 (46.32%), Postives = 83/136 (61.03%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG+V EG VAL+ +G + L A L G+ TVADARF KPLD L+R L H L+ VEEG++GGFG+H+ F+A +GLL+ G+K R + PD Y+ H SP + L+ GL I T + LGR Sbjct: 495 EIGKGRVLREGSRVALVCFGTRMSEVLVAADALIAEGLSTTVADARFAKPLDKDLMRRLACEHEVLVAVEEGAIGGFGAHLLQFLAKEGLLEHGLKVRTLKFPDEYLNHGSPEKVLSRIGLDAVGIVNTVFTALGR 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_XANP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26 Identity = 72/146 (49.32%), Postives = 89/146 (60.96%), Query Frame = -2 Query: 164 IGKGKVFVEGK---DVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 589 IGKG++ V G D+ALL G + CL A L G VTVADARF KPLD +LV +L H L+TVEEGS+GGFGSHV + +GLLD G VK R +VLPD YI+ + +QLA AGL I A LLG+ + + L Sbjct: 495 IGKGRI-VHGTGEGDIALLSLGTRLAACLDAAERLEAAGFTVTVADARFAKPLDRELVLKLAAGHGALVTVEEGSVGGFGSHVLQLVTDEGLLDRGAVKVRAMVLPDIYIDQETQARQLAAAGLDADAIVAKVEGLLGKAKAGVSL 639
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CAUSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter sp. (strain K31) GN=dxs PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26 Identity = 63/135 (46.67%), Postives = 83/135 (61.48%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIGKG++ EG VA++ G + CLKA LL+ G+ TVADARF KPLD+ ++ L + H +ITVEEG++GGFG+ V +A G LD G+K R +VLPD + + P A AGL I ALS LG Sbjct: 493 EIGKGRIVREGTSVAIVSLGTRLAECLKAADLLAARGLSATVADARFAKPLDVDMLLRLAREHEAIITVEEGAMGGFGAFVLQALATHGALDRGLKIRTLVLPDVFQDQDKPDLMYAQAGLDAEGILRGALSALG 627
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS2_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Jannaschia sp. (strain CCS1) GN=dxs2 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26 Identity = 64/135 (47.41%), Postives = 83/135 (61.48%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIGKG+V +G DVA+L +GA ++ A L G+ VTVADARF KPLD L+ +L H+ LITVE+G++ GFG V H +A G LD R + LPD +I+ ASP + A AGLT IA AL +G Sbjct: 494 EIGKGRVIQDGHDVAILSFGAHLEEAKDAATALEARGLSVTVADARFAKPLDTTLIDDLMTKHSALITVEQGAVLGFGGLVLHHLAATGQLDGRCAVRTLHLPDRFIDQASPAEMYADAGLTADDIAQAALEAMG 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_NOVAD (1-deoxy-D-xylulose-5-phosphate synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dxs PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.499e-26 Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = -2 Query: 191 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 592 EIGKG++ +G VALL G + LKA L G+ TVAD RF KPLD+ L+R+L H ++TVEEGS+GG G+HV + +GL+D G+K R + LPD + +H +P +Q AGL HI T L L Sbjct: 495 EIGKGRIIRQGSKVALLSLGTRLAEALKAADQLDARGLSTTVADLRFAKPLDVALIRQLMTTHDVIVTVEEGSIGGLGAHVLTMASDEGLVDGGLKIRTMRLPDLFQDHDAPEKQYDEAGLNAPHIVDTVLKAL 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS2_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs2 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26 Identity = 62/135 (45.93%), Postives = 83/135 (61.48%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 +IG+G+V EG +ALL +G + A L+ GI TVADARF KPLD L+ +L +H LIT+EEG++GGFGSHV+ +A G+ D G ++R +VLPD +I+H S A AGL I AL LG Sbjct: 495 QIGRGRVVSEGTRIALLSFGTRLAEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETLG 629
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PHEZH (1-deoxy-D-xylulose-5-phosphate synthase OS=Phenylobacterium zucineum (strain HLK1) GN=dxs PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.698e-26 Identity = 62/135 (45.93%), Postives = 82/135 (60.74%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIG+G++ EG VA+L +G + LKA +L+ G+ TVADARF KPLD+ L+ L + H LITVEEG++GGFG V H +A G LD G+K R + LPD + + P A AGL I AL+ LG Sbjct: 493 EIGRGRIVREGTAVAILSFGTRLGESLKAADMLAARGLSATVADARFAKPLDVDLLLRLAREHEALITVEEGAVGGFGGFVLHALAEHGALDRGLKIRTLTLPDIFQDQDKPEAMYAQAGLDAEGIVRAALAALG 627
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SPHWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.442e-26 Identity = 62/140 (44.29%), Postives = 84/140 (60.00%), Query Frame = -2 Query: 170 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 589 IGKG++ EGK VALL G + L+A L LG+ TVAD RF KPLD +++ L +H +T+EEG++GG G+HV + GL+D G+K R + LPD + EH P +Q A AGL I AT L+ L R + L Sbjct: 496 IGKGRIVREGKTVALLSLGTRLGEALRAADQLDALGLSTTVADLRFAKPLDEAMIQTLLTSHEVAVTIEEGAIGGLGAHVLTLASDLGLIDGGLKLRTMRLPDAFQEHDKPEKQYAEAGLDAESIVATVLAALHRNSKGL 635 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |