DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ERYLH (1-deoxy-D-xylulose-5-phosphate synthase OS=Erythrobacter litoralis (strain HTCC2594) GN=dxs PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.269e-25 Identity = 58/134 (43.28%), Postives = 83/134 (61.94%), Query Frame = -2 Query: 191 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 592 EIGKG++ G VALL G ++ +A L G+ T+AD RF KPLD +L+ +L +NH ++T+EE S+GG G+HV + + +GL D+G+K R + LPD +IE +P +Q AGLT HI T L L Sbjct: 495 EIGKGRIVKHGSKVALLSLGTRLEEAKRAADELEAKGLSTTIADMRFAKPLDTELIAQLMKNHEVVVTIEEASIGGLGAHVLTYASDEGLTDAGLKIRTMRLPDAFIEQDAPEKQYDEAGLTAPHIVDTVLKAL 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CAUCR (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus GN=dxs PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.828e-25 Identity = 61/135 (45.19%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIGKG++ EG VA++ +G + LKA LL+ G+ TV DARF KPLD+ L+ L + H +ITVEEGS+GGFG+ V +A G LD G+K R + LPD + + P A AGL I ALS +G Sbjct: 493 EIGKGRIVREGTSVAIVSFGTRLSESLKAADLLAARGLSATVCDARFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALDRGLKIRTLCLPDVFQDQDKPDAMYAQAGLDAEGILRGALSAMG 627
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CAUCN (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=dxs PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.828e-25 Identity = 61/135 (45.19%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIGKG++ EG VA++ +G + LKA LL+ G+ TV DARF KPLD+ L+ L + H +ITVEEGS+GGFG+ V +A G LD G+K R + LPD + + P A AGL I ALS +G Sbjct: 493 EIGKGRIVREGTSVAIVSFGTRLSESLKAADLLAARGLSATVCDARFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALDRGLKIRTLCLPDVFQDQDKPDAMYAQAGLDAEGILRGALSAMG 627
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS1_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs1 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25 Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = -2 Query: 164 EIGKGKVFVEGK-DVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLL 592 EIGKG++ EG +VA+L G ++ +C A +L GI+ T+ADARF KPLD+ L+ L Q H LITVE+G++ GFG+ V +A +GLLD G K R + LPD +I+ A+P + AGL I +LGR + + L Sbjct: 497 EIGKGRMIREGDGEVAILSLGTLLSDCEAAARILEAEGINATIADARFAKPLDMALIANLVQTHKALITVEQGAMAGFGAMVLQSMAAEGLLDLGCKVRTMCLPDRFIDQAAPAEMYRDAGLDTMGIVEQVTRVLGRDLKVVTL 640
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_GLUOX (1-deoxy-D-xylulose-5-phosphate synthase OS=Gluconobacter oxydans GN=dxs PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25 Identity = 65/142 (45.77%), Postives = 84/142 (59.15%), Query Frame = -2 Query: 188 EIGKGKVFVEGK-------DVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIGKG++ E + VA+L G + L+A L+ G+ VTVADARF KP+D LV +L + H IT+EEG++GGF S V +A GLLD VK+RP+ LPD YI+H + Q AGLT HI TA LG Sbjct: 512 EIGKGRIVREARRAPNARGGVAILSLGPRMHESLRAADQLAAQGVPVTVADARFAKPIDKALVEDLARQHEVFITIEEGAIGGFSSLVVQHLAETGLLDK-VKFRPMALPDRYIDHNTQDAQYEDAGLTAPHIVRTAADALG 652
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SPHAL (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingopyxis alaskensis GN=dxs PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.896e-23 Identity = 58/134 (43.28%), Postives = 76/134 (56.72%), Query Frame = -2 Query: 191 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 592 EIGKG+V EGK VA+L G + LKA L G+ +V D RF KPLD +L+R H +TVEEGS+GG G+HV + +GL+D+G+K R + LPD + + P Q AGL I T L L Sbjct: 495 EIGKGRVVREGKTVAILSLGTRLAEALKAADTLEARGLSTSVIDLRFAKPLDEELIRRTLAAHEVCVTVEEGSIGGLGAHVLTLASDEGLIDAGLKLRTLRLPDMFQDQDKPELQYDAAGLNAPQIVDTVLKAL 628
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS1_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Zymomonas mobilis GN=dxs1 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22 Identity = 57/135 (42.22%), Postives = 79/135 (58.52%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGKG++ GK VA+L G ++ LKA L G+ +VAD RF KPLD L R+L ++H +IT+EEG+LGGF + V + +GL+D G+K R + LPD + +Q A AGL I A +S L R Sbjct: 496 IGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHR 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS2_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Zymomonas mobilis GN=dxs2 PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.112e-21 Identity = 56/135 (41.48%), Postives = 78/135 (57.78%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGKG++ GK VA+L G ++ LKA L G+ +VAD RF KPLD L R+L ++H +IT+EEG+LGGF + V + +GL+D G+K R + LPD + +Q A AGL I A + L R Sbjct: 496 IGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVTAALQR 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ANAVT (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dxs PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19 Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = -2 Query: 200 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATAL 592 EIGKG++ G DV ++GYG MV ++A +LS+ GI+ TV +ARF KPLD +L+ L Q ++T+EEG +GGFGS V+ + LLD+ V + I +PD +EHA+P + A GLT IA L Sbjct: 495 EIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVA-----EALLDADVVVPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERVL 623
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ANASP (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=dxs PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19 Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = -2 Query: 200 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATAL 592 EIGKG++ G DV ++GYG MV ++A +LS+ GI+ TV +ARF KPLD +L+ L Q ++T+EEG +GGFGS V+ + LLD+ V + I +PD +EHA+P + A GLT IA L Sbjct: 495 EIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVA-----EALLDADVVVPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERVL 623 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |