DT214506 | Citrus Genome Database

Overview


Name	DT214506
Unique Name	DT214506
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	540

Libraries


Library Name	Type
Parent Washington Navel Orange Callus cDNA Library UCRCS08-4	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig4323	contig	Csv1_Contig4323:43..582.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: TAF5_ENCCU (Transcription initiation factor TFIID subunit 5 OS=Encephalitozoon cuniculi GN=TAF5 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.660e-16
Identity = 43/125 (34.40%), Postives = 74/125 (59.20%), Query Frame = -2

Query:  165 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAG 539
            VRIF GH   +  + +S  G+++ASG +D T+++WD+ S + +   +GH + V+++++   GS+LAS  AD +V+LWD        +T+ K G      L T  TK+TP+  ++F  RN++   G
Sbjct:  441 VRIFCGHTDTVTCMDVSHCGKFLASGSKDRTVLLWDIQSSKLLGKYVGHENTVFSVSFCFYGSVLASCGADNSVRLWD--------RTDHKGG-----CLGTYYTKNTPLLCVKFGYRNIISCTG 552

[Close]

BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: TAF73_SCHPO (Transcription initiation factor TFIID subunit taf73 OS=Schizosaccharomyces pombe GN=taf73 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.520e-15
Identity = 45/123 (36.59%), Postives = 65/123 (52.85%), Query Frame = -2

Query:  171 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFA 539
            VR+F  H S + +L MS DG  +AS DE G I +WDL S       + H+S V++L++S +  +L SG AD  V  WD+T    +   E+         L    TK+T + +L F+RRN   A
Sbjct:  522 VRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDLTYRNNLSDGEQSP------LLFNFKTKNTIIQNLSFTRRNYCLA 638

[Close]

BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: Y2800_ANASP (Uncharacterized WD repeat-containing protein alr2800 OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.291e-15
Identity = 45/130 (34.62%), Postives = 68/130 (52.31%), Query Frame = -2

Query:  150 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 539
            ++   GH   + S+A  PDG  +AS   D TI +WD+  G C+  L GHT  V  +A+S +G+ LAS +AD T+KLWDV+                 + L+TL + +  V S+ FS      A+G+  +T
Sbjct:  719 IKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQG---------------KCLRTLKSHTGWVRSVAFSADGQTLASGSGDRT 833

HSP 2 Score: 79.7221 bits (195), Expect = 9.575e-15
Identity = 38/125 (30.40%), Postives = 68/125 (54.40%), Query Frame = -2

Query:  150 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 524
            GH   I  +A SPD + +AS   D ++ +W++++G+C   L+ HT  V+ + +  +G ++A+GSADCTVKLW+++T                + LKTL   S  +  + +S    L A+ +  ++
Sbjct:  976 GHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTG---------------QCLKTLSEHSDKILGMAWSPDGQLLASASADQS 1085

HSP 3 Score: 79.337 bits (194), Expect = 1.251e-14
Identity = 42/125 (33.60%), Postives = 65/125 (52.00%), Query Frame = -2

Query:  150 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 524
            GH   +  +A SPDG  +AS   D TI +WD++ G+C+  L  HT  V ++A+S +G  LASGS D T+K+W+  T                  LKT    +  VYS+ +S  + +  +G+  +T
Sbjct:  766 GHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTG---------------ECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRT 875

HSP 4 Score: 76.2554 bits (186), Expect = 1.059e-13
Identity = 32/81 (39.51%), Postives = 54/81 (66.67%), Query Frame = -2

Query:  297 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 539
            ++   GH + +  +A SPDG+ +AS   D T+ +WD+ +G+C    +GHT  V ++A+S +G ++ASGS D TV++W+V T
Sbjct: 1139 LKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKT 1219

HSP 5 Score: 75.8702 bits (185), Expect = 1.383e-13
Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = -2

Query:  297 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 539
            +R    H   + S+A S DG+ +ASG  D TI +W+  +G C+   +GHT+ V+++AYS +  +L SGS D T+KLWD  T
Sbjct:  803 LRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQT 883

HSP 6 Score: 74.7146 bits (182), Expect = 3.080e-13
Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = -2

Query:  297 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 539
            V I  GH + + S   SP+G  +A+   D T+ +WD   G+C+  L GHT+ V+ +A+S +G +LAS S D TV++WDV T
Sbjct: 1097 VGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNT 1177

HSP 7 Score: 72.7886 bits (177), Expect = 1.170e-12
Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = -2

Query:  150 HRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 521
            H   IL +A SPDG+ +AS   D ++ +WD  +GRCV  L GH++ V++  +S  G ++A+ S D TVK+WD                 + + LKTL   +  V+ + FS    + A+ +  +T
Sbjct: 1061 HSDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWD---------------WQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQT 1169

HSP 8 Score: 69.707 bits (169), Expect = 9.909e-12
Identity = 32/81 (39.51%), Postives = 51/81 (62.96%), Query Frame = -2

Query:  297 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 539
            ++ +IGH + + S+A SPD + + SG  D TI +WD  +  C+  L GHT+ V ++A+S +G  LA  S D +V+LW+  T
Sbjct:  845 LKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRT 925

HSP 9 Score: 69.3218 bits (168), Expect = 1.294e-11
Identity = 29/81 (35.80%), Postives = 52/81 (64.20%), Query Frame = -2

Query:  297 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 539
            ++ + G+    L +A SPD + +ASG  D T+ +WD  +G+ ++ L GHT  ++ +A+S +   LAS S D +V+LW+++T
Sbjct:  929 LKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNIST 1009

HSP 10 Score: 68.5514 bits (166), Expect = 2.207e-11
Identity = 41/140 (29.29%), Postives = 71/140 (50.71%), Query Frame = -2

Query:  117 RIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKTS*KIYAERDGR 536
            +I + H   + ++   P G+ +A+G  D T+ +W++++G+C+  L  H+  +  +A+S +G LLAS SAD +V+LWD  T                R +  L   S  VYS  FS    + A  +  +T  KI+  + G+
Sbjct: 1014 QILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTG---------------RCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTV-KIWDWQQGK 1137

[Close]

BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.613e-15
Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = -2

Query:  252 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNR 524
            GH   +  LA SPDG+++AS  +D T+ +WDL +G+ +T    HTS V  + +     LLASGSAD TVKLWD+     +  +E ++G  R
Sbjct:  145 GHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVR 235

HSP 2 Score: 77.0258 bits (188), Expect = 6.206e-14
Identity = 48/130 (36.92%), Postives = 64/130 (49.23%), Query Frame = -2

Query:  150 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 539
            +R  +GH++ I SL   P G Y+ASG  D  I +WD+    CV    GHT  V  LA+S +G  LAS S D TVKLWD+     +  TE  S T             + V  +QF     L A+G+  +T
Sbjct:   98 LRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMI--TEFTSHT-------------SAVNVVQFHPNEYLLASGSADRT 212

[Close]

BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: Y2124_ANASP (Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.633e-14
Identity = 42/142 (29.58%), Postives = 76/142 (53.52%), Query Frame = -2

Query:  114 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKTS*KIYAERDGRV 539
            ++  IGH + +  +  SPDG+ +AS   D T+ +W+++ G+    L GHT  V+ +++S +G ++AS SAD T++LWD  +   +               K+LP  +  VYS+ F+    + A+ +  KT  K++   DG +
Sbjct: 1439 LKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLI---------------KSLPAHNDLVYSVNFNPDGSMLASTSADKTV-KLWRSHDGHL 1564

HSP 2 Score: 76.2554 bits (186), Expect = 1.059e-13
Identity = 46/141 (32.62%), Postives = 72/141 (51.06%), Query Frame = -2

Query:  114 RIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKTS*KIYAERDGRV 536
            R   GH   + S++ SPDG+ +ASG  D TI +W  + G  +  + GH   V  + +S +G  LAS S+D ++KLWD T+                + L TL   S  V +++FS      AAG+  KT  K++  +DG++
Sbjct: 1107 RTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSG---------------QLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTV-KLWHRQDGKL 1231

HSP 3 Score: 74.7146 bits (182), Expect = 3.080e-13
Identity = 42/125 (33.60%), Postives = 64/125 (51.20%), Query Frame = -2

Query:  150 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 524
            GH+  + SL+ SPDG+ +AS   D TI +W +A G+ V  L GH   VW + +S +G  +AS S D T+KLW+            + G      L+T    S  VY++ F   + + A+ +L  T
Sbjct: 1237 GHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWN------------RHGI----ELETFTGHSGGVYAVNFLPDSNIIASASLDNT 1345

HSP 4 Score: 71.633 bits (174), Expect = 2.608e-12
Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = -2

Query:  114 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKTS*KIYAERDGRV 539
            ++   GH   + ++  SPDG+ +AS   D +I +WD  SG+ +  L GH++ V T+ +S +G  +A+GS D TVKLW             + G    + LKTL      V SL FS      A+ +  KT  K++   DG++
Sbjct: 1148 LKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLW-----------HRQDG----KLLKTLNGHQDWVNSLSFSPDGKTLASASADKTI-KLWRIADGKL 1273

HSP 5 Score: 69.3218 bits (168), Expect = 1.294e-11
Identity = 33/83 (39.76%), Postives = 53/83 (63.86%), Query Frame = -2

Query:  276 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKT 524
            GH + ++++  SPDG+ +A+G ED T+ +W    G+ +  L GH   V +L++S +G  LAS SAD T+KLW +    K++KT
Sbjct: 1195 GHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADG-KLVKT 1276

[Close]

BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.059e-13
Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = -2

Query:  162 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGA 524
            GH+  I  +A S D   + S  +D T+ +WD++SG+C+  L GH++ V+   ++ + +L+ SGS D +V++WDV T                + LKTLP  S PV ++ F+R   L  + +
Sbjct:   85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---------------KCLKTLPAHSDPVSAVHFNRDGSLIVSSS 190

[Close]

BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.059e-13
Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = -2

Query:  162 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGA 524
            GH+  I  +A S D   + S  +D T+ +WD++SG+C+  L GH++ V+   ++ + +L+ SGS D +V++WDV T                + LKTLP  S PV ++ F+R   L  + +
Sbjct:   85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---------------KCLKTLPAHSDPVSAVHFNRDGSLIVSSS 190

[Close]

BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.059e-13
Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = -2

Query:  162 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGA 524
            GH+  I  +A S D   + S  +D T+ +WD++SG+C+  L GH++ V+   ++ + +L+ SGS D +V++WDV T                + LKTLP  S PV ++ F+R   L  + +
Sbjct:   85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---------------KCLKTLPAHSDPVSAVHFNRDGSLIVSSS 190

[Close]

BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.059e-13
Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = -2

Query:  162 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGA 524
            GH+  I  +A S D   + S  +D T+ +WD++SG+C+  L GH++ V+   ++ + +L+ SGS D +V++WDV T                + LKTLP  S PV ++ F+R   L  + +
Sbjct:   85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---------------KCLKTLPAHSDPVSAVHFNRDGSLIVSSS 190

[Close]

BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.059e-13
Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = -2

Query:  162 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGA 524
            GH+  I  +A S D   + S  +D T+ +WD++SG+C+  L GH++ V+   ++ + +L+ SGS D +V++WDV T                + LKTLP  S PV ++ F+R   L  + +
Sbjct:   85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---------------KCLKTLPAHSDPVSAVHFNRDGSLIVSSS 190

The following BLAST results are available for this feature:

BLAST of DT214506 vs. ExPASy Swiss-Prot

BLAST of DT214506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65


Match Name	E-value	Identity	Description
TAF5_ENCCU	8.660e-16	34.40	Transcription initiation factor TFIID subunit 5 OS...	[more]
TAF73_SCHPO	2.520e-15	36.59	Transcription initiation factor TFIID subunit taf7...	[more]
Y2800_ANASP	3.291e-15	34.62	Uncharacterized WD repeat-containing protein alr28...	[more]
KTNB1_DANRE	5.613e-15	41.76	Katanin p80 WD40-containing subunit B1 OS=Danio re...	[more]
Y2124_ANASP	1.633e-14	29.58	Uncharacterized WD repeat-containing protein all21...	[more]
WDR5_XENTR	1.059e-13	32.23	WD repeat-containing protein 5 OS=Xenopus tropical...	[more]
WDR5_RAT	1.059e-13	32.23	WD repeat-containing protein 5 OS=Rattus norvegicu...	[more]
WDR5_MOUSE	1.059e-13	32.23	WD repeat-containing protein 5 OS=Mus musculus GN=...	[more]
WDR5_HUMAN	1.059e-13	32.23	WD repeat-containing protein 5 OS=Homo sapiens GN=...	[more]
WDR5_BOVIN	1.059e-13	32.23	WD repeat-containing protein 5 OS=Bos taurus GN=WD...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS08_16C03_b2 Parent Washington Navel Orange Callus cDNA Library UCRCS08-4 Citrus sinensis cDNA clone UCRCS08-16C03-F6-1-5.d-polyt, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DT214506 ID=DT214506; Name=DT214506; organism=Citrus sinensis; type=EST; length=540bp
TTTCTCGTTTCTTAATACGTGTTACAATATAGAACACAGAAAGTTATCAA
GCCCAATCGTTGACAAAGGATTCTGATTTTACATCCAAGACTTTGCCTGC
ACTGCTGTTGTTGAACTCGCCCATCCCGCTCAGCATAAATCTTCTATGAA
GTTTTTGAGAGAGCCCCCGCAGCAAATAGGAGATTTCTTCGAGAAAACTG
TAAAGAATAGACTGGCGTCGACTTGGTTGGCAGAGTTTTCAACGATCTCA
GTCTGTTTGTTCCACTCTTCTCTTCGGTTTTCAGCACCTTCGTGCTAGTA
GTGACATCCCATAATTTTACGGTGCAATCAGCAGATCCAGATGCGAGAAG
CGAACCTTCACAACTGTAGGCTAGTGTCCACACGCATGAGGTGTGACCCA
TCAAAGGGGTGACACAACGACCACTAGCAAGATCCCACATCATGATCGTG
CCATCTTCATCACCAGATGCCATGTACCGACCATCGGGTGACATTGCTAA
TGACAAAATCATACTCCTATGTCCAATAAAAATCCGGACA