DT214506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.358e-13 Identity = 39/121 (32.23%), Postives = 67/121 (55.37%), Query Frame = -2 Query: 162 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGA 524 GH+ I +A S D R + SG +D T+ +W+L++G+ + L GH++ V+ ++ + +L+ SGS D +V++WDV T + LKTLP S PV ++ F+R L + + Sbjct: 112 GHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG---------------KCLKTLPAHSDPVSAVHFNRDGSLIVSSS 217
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.358e-13 Identity = 43/130 (33.08%), Postives = 63/130 (48.46%), Query Frame = -2 Query: 150 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 539 +R +GH++ + SL P G ++ASG D I +WD+ CV GHT V L +S +G LAS S D +VKLWD+T + + E G PV ++F L A+G+ +T Sbjct: 98 LRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKG---------------PVNIIEFHPNEYLLASGSADRT 212
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.358e-13 Identity = 42/130 (32.31%), Postives = 64/130 (49.23%), Query Frame = -2 Query: 150 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 539 +R +GH++ I SL P G ++ASG +D I +WD+ CV GH+ V L +S +G LAS + D TVKLWD+T + + P + PV ++F L A+G+ +T Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG---------------KMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212 HSP 2 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = -2 Query: 252 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNR 524 GH + L SPDG+++AS +D T+ +WDL +G+ ++ GHT V + + LLASGS+D T++ WD+ V E + G R Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVR 235
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.358e-13 Identity = 42/130 (32.31%), Postives = 64/130 (49.23%), Query Frame = -2 Query: 150 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 539 +R +GH++ I SL P G ++ASG +D I +WD+ CV GH+ V L +S +G LAS + D TVKLWD+T + + P + PV ++F L A+G+ +T Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG---------------KMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRT 212 HSP 2 Score: 67.3958 bits (163), Expect = 4.918e-11 Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = -2 Query: 252 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNR 524 GH + L SPDG+++AS +D T+ +WDL +G+ ++ GHT V + + LLASGS+D T++ WD+ V E + G R Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVR 235
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.080e-13 Identity = 43/130 (33.08%), Postives = 63/130 (48.46%), Query Frame = -2 Query: 150 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 539 +R +GH++ + SL P G ++ASG D I +WD+ CV GHT V L +S +G LAS S D +VKLWD+T + + E G PV ++F L A+G+ +T Sbjct: 98 LRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKG---------------PVNIIEFHPNEYLLASGSADRT 212
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: WDR38_HUMAN (WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.862e-13 Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -2 Query: 264 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTS--TKVLKTEEKS 539 V+ F H + S A SPDG+ + +G EDG + W+ SG+ + L GHT V +S +G L AS S DCTV+LWDV + +VLK ++S Sbjct: 14 VKFFGQHGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRS 107
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.862e-13 Identity = 42/145 (28.97%), Postives = 69/145 (47.59%), Query Frame = -2 Query: 150 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRL-------------------------RSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 509 + ++A SPDG+Y+ +G ED I +WDL++ + GH +++L +S G + SGS D T +LWDV T +LK E ++G + ++ L VYS+ FS + + +G+L KT Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKT 507
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.962e-13 Identity = 43/117 (36.75%), Postives = 63/117 (53.85%), Query Frame = -2 Query: 192 VRIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAY-SCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFS 539 V GH + +A +P+GRY+A+ +D ++ +WD +G C+ L GHT+ V+ + G LLASGS D T++LWDV +SG R L+ +P S PV S FS Sbjct: 75 VNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDV-----------RSG----RCLREVPAHSDPVTSAAFS 176
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.529e-12 Identity = 40/125 (32.00%), Postives = 63/125 (50.40%), Query Frame = -2 Query: 162 RIFIGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGA 536 R GH I +A S D + S +D T+ +WD+ SG+C+ L GH++ V+ ++ +L+ SGS D TVK+W+V T + LKTL S PV ++ F+ L +G+ Sbjct: 77 RTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTG---------------KCLKTLSAHSDPVSAVHFNCSGSLIVSGS 186
BLAST of DT214506 vs. ExPASy Swiss-Prot
Match: TUP1_KLULA (General transcriptional corepressor TUP1 OS=Kluyveromyces lactis GN=TUP1 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.529e-12 Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = -2 Query: 261 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSG 509 I S+ SPDG+++A+G ED I +WDL + + V L GH +++L Y G+ L SGS D TV++WD+TT T L + G Sbjct: 409 IRSVCFSPDGKFLATGAEDKLIRIWDLETKKIVMTLKGHEQDIYSLDYFPSGNKLVSGSGDRTVRIWDLTTGTCSLTLSIEDG 491 The following BLAST results are available for this feature:
BLAST of DT214506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214506 ID=DT214506; Name=DT214506; organism=Citrus sinensis; type=EST; length=540bpback to top |