DT214504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_HUMAN (Proteasome subunit alpha type-1 OS=Homo sapiens GN=PSMA1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.101e-17 Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 415 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNY 825 Q+EYAMEA+ + +G+ SK VLV K+ S+L + +K+ +D+H+ ++AG+ +DA +L N R + + + P+PV +LV + Q TQ G RP+GV L AG+D + G ++ + PS NY Sbjct: 21 QIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL---AAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANY 153
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_BOVIN (Proteasome subunit alpha type-1 OS=Bos taurus GN=PSMA1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.101e-17 Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 415 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNY 825 Q+EYAMEA+ + +G+ SK VLV K+ S+L + +K+ +D+H+ ++AG+ +DA +L N R + + + P+PV +LV + Q TQ G RP+GV L AG+D + G ++ + PS NY Sbjct: 21 QIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL---AAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANY 153
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_RAT (Proteasome subunit alpha type-1 OS=Rattus norvegicus GN=Psma1 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.744e-17 Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 415 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNY 825 Q+EYAMEA+ + +G+ SK VLV K+ S+L + +K+ +D+H+ ++AG+ +DA +L N R + + + P+PV +LV + Q TQ G RP+GV L AG+D + G ++ + PS NY Sbjct: 21 QIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL---AAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHVFQTCPSANY 153
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.275e-14 Identity = 51/186 (27.42%), Postives = 92/186 (49.46%), Query Frame = -2 Query: 238 SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVE---QLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 786 + +GI KDGVV E++ + L +T+K++KID+H+A +AG ++DA L+ + +A Y E + +E L ++ + + Y PF V L G D+N G ++Y DPSG K +L+ Y D++ +EAV +A++ + M+ + + + + +A V Sbjct: 11 TTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFY-------PFIVQTLLGGVDEN-GAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGILVATV 188
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.174e-14 Identity = 61/226 (26.99%), Postives = 104/226 (46.02%), Query Frame = -2 Query: 169 QVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYK----DDISREEAVQLALKVLSKTMDS--TSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLV 825 QVEYA +A +++ + KD V++ +KKV KLL +T ++ I + V G + DA A+ +A + Y Y MP + L + + + Q YTQ +RP GV F D+ G +Y +DP+G Y G+K + L+ +K D I+ E ++ ++ +D+ T + + LE+ + K K+ S E + + LV Sbjct: 27 QVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTT-VSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVG-----VATKDKFFTLSAENIEERLV 246
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.193e-12 Identity = 50/176 (28.41%), Postives = 86/176 (48.86%), Query Frame = -2 Query: 259 SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSD 786 + +GI+ KDGVVL +++ + + + + K++KID+H+A A AG + D L+ R +A+ Y + M V+ L L + G F P+ FL G+D+ +LY D G K SIL +YKD+++ EE ++LA+K ++ + + D Sbjct: 12 TTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYF----PYLAWFLVGGYDEKP--KLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGD 181
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.035e-12 Identity = 47/141 (33.33%), Postives = 69/141 (48.94%), Query Frame = -2 Query: 421 QVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKN-----YGFQLYMSDPSG 825 QVEYA +A+ AG + I KD V++ + V KL++ T T +Y ++D+ + G D L+ AR +A Y Y Y PM V L + D Q TQ G+R G F G ++N + Q+Y DP+G Sbjct: 21 QVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETIT-SLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAG 160
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.734e-12 Identity = 53/215 (24.65%), Postives = 94/215 (43.72%), Query Frame = -2 Query: 166 EAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK-XXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVK 807 E I + +G++ KDGVV+ EK+ T S + +K+Y+I D +A AG + DA L +++A Y + V + + Y F P+ V L G D G +Y DP G K +L+ + +I +EAV+LA++ + M S + D +++ ++ + ++ SPE + ++L K Sbjct: 6 EKIYKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYF----PYLVQLLIGGIDSE-GKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKI-----TEDEFYQYSPEEVEQILAK 210
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.723e-11 Identity = 45/184 (24.46%), Postives = 80/184 (43.48%), Query Frame = -2 Query: 238 SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK-XXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 786 + +G++ D V+L +K+ + L +K+YKIDD++A +AG + DA ++ +A+ Y +P L + F PF + G+D G +L+ DP G K +L+ Y D+S EE ++LAL L M+ + + + + LA + Sbjct: 8 TTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMF----PFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVI 187 The following BLAST results are available for this feature:
BLAST of DT214504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214504 ID=DT214504; Name=DT214504; organism=Citrus sinensis; type=EST; length=826bpback to top |