DT214504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.403e-29 Identity = 67/206 (32.52%), Postives = 118/206 (57.28%), Query Frame = -2 Query: 208 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKY 825 QVEYA EA+ A+G+ KD ++ EKK KL Q S +T K+YK+D+H+ A AG+ +DA +++N A+++ QR+ +Y++ + V+ LV+ + +Q TQ G RP+GVS + G+++N QL+ ++PSG W ++++Y+D ++R+ V A+K L + ++S S + E+ ++ GK Y Sbjct: 18 QVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKL-QDSRTTRKIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNENGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMTRDRCVHFAIKALLEAVESGS------KNIELLVLERGKAAY 216
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.832e-29 Identity = 76/196 (38.78%), Postives = 117/196 (59.69%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA EA+ ++IG+ + +GVVL +K+ S L++ TS EK++K DDH+ A AG ++DA LI+ AR Q+Q Y EP+ +E L + + D Q YTQ GG RPFGV+ L G + N +LY +DPSG WK Q L+++++DD++ +E ++LAL+ ++ T D D +++A V Sbjct: 25 QVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEP-TSVEKIHKADDHIGIASAGHVADARQLIDFARHQSQVNRLRYGEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGVE-NGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDLTLDEGIELALEAIASTSDE-GTAPDGVDVATV 217
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA5_TRYBB (Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.832e-29 Identity = 76/223 (34.08%), Postives = 127/223 (56.95%), Query Frame = -2 Query: 172 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG-----LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 825 Q+EYA+EAI +++GI + D V++ EK+V S L+ S S K+ +ID H+ ++G+++DA IL++ ARV+AQ + + Y EPM VE + CD + + GG RPFGVS L AG D+N G QL+ +DPSG Y + Q++ + Y +++ EEA L +++L + M+ LT +E+A ++P + Q+ E + +++ Sbjct: 23 QIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVDPS-SVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVDEN-GPQLWQTDPSGTYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEEAENLTVQILRQVMEE-KLTKTSVEIA---IVPVSTGRLQIYDQEQIQRII 239
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.393e-29 Identity = 73/196 (37.24%), Postives = 113/196 (57.65%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA EA+ +A+GI +GVVL+ +K+VTS+LL+ S EK++KID H+ A +G++ DA L++ ARV++Q +Y EP+ VE L + LCD Q YTQFGG RP+G + L AG +L+ +DPSG +K + +Y++D A++L +K L + T KL+++ + Sbjct: 24 QVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLEP-VSIEKIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQFGGARPYGTALLIAGVSDGEA-RLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDADFSGAIRLGIKALH------AATEGKLDVSAI 211
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.393e-29 Identity = 72/185 (38.92%), Postives = 107/185 (57.84%), Query Frame = -2 Query: 277 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDD--ISREEAVQLALKVLSKTMDS 825 QVEYA EA+ +A+GI + VVL EKK +KL Q + K+ +DDHV A AG+ +DA ++IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y +D S EA++LA+K L + + S Sbjct: 20 QVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKL-QDERTVRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEVVQS 203
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.125e-29 Identity = 78/196 (39.80%), Postives = 117/196 (59.69%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA EA+ +++GI + DG+VL +K+ S L++ TS EK++K DDHV A AG ++DA LI+ AR QAQ Y EP+ +E L +++ D Q YTQ GG RPFGV+ L G + +LY +DPSG WK Q L+++Y +++S +E V LAL+ ++ + D LT+ +++A V Sbjct: 25 QVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEP-TSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARPFGVALLIGGIEDG-SPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELSLDEGVGLALRTIAISNDD-ELTAAGVDVATV 217
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29 Identity = 71/184 (38.59%), Postives = 109/184 (59.24%), Query Frame = -2 Query: 277 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDS 825 QVEYA+EA+ +A+G+ D VVL EKK T KL Q S S K+ +D H+A A AG+ +DA +LIN ARV+ Q + ++ + VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK + L+++YK + S +E ++LA++ L + ++S Sbjct: 19 QVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKL-QDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGKETIKLAIRALLEVVES 200
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29 Identity = 71/184 (38.59%), Postives = 109/184 (59.24%), Query Frame = -2 Query: 277 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDS 825 QVEYA+EA+ +A+G+ D VVL EKK T KL Q S S K+ +D H+A A AG+ +DA +LIN ARV+ Q + ++ + VE + + + +Q YTQ GG+RPFG+S L G+D LY +DPSG + WK + L+++YK + S +E ++LA++ L + ++S Sbjct: 19 QVEYALEAVRKGNAAVGVRGSDTVVLGVEKKSTPKL-QDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK-ETSGKETIKLAIRALLEVVES 200
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29 Identity = 71/218 (32.57%), Postives = 125/218 (57.34%), Query Frame = -2 Query: 172 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 825 Q+E+A+ A+G+ +++GI + +GVV+ EKK+ S +L TS +K+ + ++ +G+ D +L+ +R QAQ+Y Y+E +PV QLV+ Q +TQ GG+RPFGVS L AG+D N G QLY DPSG+Y WK ++ L++ Y +D+ ++A+ A+ L + + ++++ +E+ + +++V SP + L Sbjct: 21 QIEHALTAVGSGQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEG-QISANNIEIGII----RSDREFKVLSPAEIKDFL 231
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29 Identity = 71/218 (32.57%), Postives = 125/218 (57.34%), Query Frame = -2 Query: 172 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 825 Q+E+A+ A+G+ +++GI + +GVV+ EKK+ S +L TS +K+ + ++ +G+ D +L+ +R QAQ+Y Y+E +PV QLV+ Q +TQ GG+RPFGVS L AG+D N G QLY DPSG+Y WK ++ L++ Y +D+ ++A+ A+ L + + ++++ +E+ + +++V SP + L Sbjct: 21 QIEHALTAVGSGQTSLGIKAANGVVIATEKKLPS-ILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEG-QISANNIEIGII----RSDREFKVLSPAEIKDFL 231 The following BLAST results are available for this feature:
BLAST of DT214504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214504 ID=DT214504; Name=DT214504; organism=Citrus sinensis; type=EST; length=826bpback to top |