DT214504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.093e-29 Identity = 66/196 (33.67%), Postives = 117/196 (59.69%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 Q+E+A+ A+G+ +++GI + +GVV+ EKK+ S +L S +K+ + ++ +G+ D +L+ +R QA++Y Y+EP+PV QLV+ Q +TQ GG+RPFGVS L AG+D + G QLY DPSG+Y WK ++ L++ Y +D+ ++A+ A+ L + + ++S +E+ ++ Sbjct: 21 QIEHALTAVGSGQTSLGIKASNGVVIATEKKLPS-ILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEG-EISSKNIEIGKI 213
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.093e-29 Identity = 66/196 (33.67%), Postives = 117/196 (59.69%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 Q+E+A+ A+G+ +++GI + +GVV+ EKK+ S +L S +K+ + ++ +G+ D +L+ +R QA++Y Y+EP+PV QLV+ Q +TQ GG+RPFGVS L AG+D + G QLY DPSG+Y WK ++ L++ Y +D+ ++A+ A+ L + + ++S +E+ ++ Sbjct: 21 QIEHALTAVGSGQTSLGIKASNGVVIATEKKLPS-ILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEG-EISSKNIEIGKI 213
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.551e-28 Identity = 70/185 (37.84%), Postives = 105/185 (56.76%), Query Frame = -2 Query: 277 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 825 QVEYA EA+ +A+G+ KD VVL EKK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y DD + ++L +K L + + S Sbjct: 18 QVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQS 201
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.551e-28 Identity = 70/185 (37.84%), Postives = 108/185 (58.38%), Query Frame = -2 Query: 277 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDI--SREEAVQLALKVLSKTMDS 825 QVEYA EA+ +A+GI + VVL EKK +KL Q + K+ +DDHV A AG+ +DA ++I+ ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y +D + +EA++LA+K L + + S Sbjct: 20 QVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKL-QDERTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEVVQS 203
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.026e-28 Identity = 74/179 (41.34%), Postives = 107/179 (59.78%), Query Frame = -2 Query: 289 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSK 825 QVEYA EA+ ++IG+ + +GVVLV +K+ S LL+ S S EK++KIDDHV A AG ++DA L++ AR Q+Q Y EP+ V L +S+ D Q YTQ GG RPFGV+ L AG + +L+ +DPSG WK Q L+ +Y +S ++ + LAL+ L++ Sbjct: 25 QVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGS-SVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVEGGEP-RLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNE 201
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.026e-28 Identity = 74/179 (41.34%), Postives = 107/179 (59.78%), Query Frame = -2 Query: 289 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSK 825 QVEYA EA+ ++IG+ + +GVVLV +K+ S LL+ S S EK++KIDDHV A AG ++DA L++ AR Q+Q Y EP+ V L +S+ D Q YTQ GG RPFGV+ L AG + +L+ +DPSG WK Q L+ +Y +S ++ + LAL+ L++ Sbjct: 25 QVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGS-SVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQYTQVGGARPFGVALLIAGVEGGEP-RLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNE 201
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.513e-28 Identity = 69/185 (37.30%), Postives = 105/185 (56.76%), Query Frame = -2 Query: 277 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 825 QVEYA EA+ +A+G+ KD VVL EKK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y D+ + ++L +K L + + S Sbjct: 18 QVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQS 201
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.005e-27 Identity = 68/185 (36.76%), Postives = 105/185 (56.76%), Query Frame = -2 Query: 277 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREE--AVQLALKVLSKTMDS 825 QVEYA EA+ +A+G+ +D VVL EKK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y D+ + ++L +K L + + S Sbjct: 18 QVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQS 201
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 1.313e-27 Identity = 72/191 (37.70%), Postives = 107/191 (56.02%), Query Frame = -2 Query: 277 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVA------GIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDD--ISREEAVQLALKVLSKTMDS 825 QVEYA EA+ +A+GI + VVL EKK +KL Q + K+ +DDHV A A G+ +DA ++IN ARV+ Q + ++P+ VE + + + KQ YTQ G RPFG+S L G+D + +LY +DPSG Y WK + L+++Y +D S EA++LA+K L + + S Sbjct: 20 QVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKL-QDERTVRKICALDDHVCMAFAVLTIFIGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQS 209
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA2_HALVO (Proteasome subunit alpha 2 OS=Halobacterium volcanii GN=psmA2 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.240e-27 Identity = 75/230 (32.61%), Postives = 120/230 (52.17%), Query Frame = -2 Query: 136 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGVTQPAAET 825 QVEYA EA+ +G+ + DGVVL + S+L++ S EK++K+DD + A AG ++DA L++ AR AQR Y EP+ VE L +++ D Q TQ GG RP+G S L G + G +L+ +DPSG WK Q+ L+ Y +D+S E+ + LA++ L +++E E+ L+ + Y++ E +++L + ET Sbjct: 24 QVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAE-SIEKLHKLDDALGAATAGHVADARKLVDFARTTAQREHLRYGEPIGVETLTKTITDNIQESTQSGGTRPYGASLLIGGVENGSG-RLFATDPSGTPQEWKAVAIGGHREDVQAALEDGYAEDLSLEDGLALAVEAL-------VAADEEIESDELNLVTVSEAGYEIVDEETIAELFADATADDESDET 244 The following BLAST results are available for this feature:
BLAST of DT214504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214504 ID=DT214504; Name=DT214504; organism=Citrus sinensis; type=EST; length=826bpback to top |