CX293891

Overview
NameCX293891
Unique NameCX293891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYM_PONAB (Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2 PE=2 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 3.223e-22
Identity = 63/169 (37.28%), Postives = 92/169 (54.44%), Query Frame = 3
Query:   36 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFED-----KAVAIMLDTKGPEVRSGDV----PQPIILKEGQEFNFTIKRGV---STEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            P   R T I+CTIGP++ S E + ++ + GMNVARLN SHG H  H +TI  V+     F       + VA+ LDTKGPE+R+G +       + LK+G     T+         E+ + ++Y +    VEVG  + VD G++SL VK K  D +   V +GG L S++
Sbjct:   39 PITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLLTEVENGGSLGSKK 207          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYM_HUMAN (Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4)

HSP 1 Score: 104.375 bits (259), Expect = 3.223e-22
Identity = 63/169 (37.28%), Postives = 92/169 (54.44%), Query Frame = 3
Query:   36 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFED-----KAVAIMLDTKGPEVRSGDV----PQPIILKEGQEFNFTIKRGV---STEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            P   R T I+CTIGP++ S E + ++ + GMNVARLN SHG H  H +TI  V+     F       + VA+ LDTKGPE+R+G +       + LK+G     T+         E+ + ++Y +    VEVG  + VD G++SL VK K  D +   V +GG L S++
Sbjct:   39 PITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKK 207          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_YARLI (Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=3 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.225e-21
Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSG----DVPQPIILKEGQEFNFTIKRGVSTEDTVS-VNYDDFVNDVEVGDILLVDGGMMSLAVKSKTK-DLVKCIVVDGGELKSRR 506
            RK+ I+ TIGP+T+S EMI KL + G+N+ R+N SHG +  HQ  I+  +E   QF+ + +AI LDTKGPE+R+G    D    +       F+   K     +D +  ++Y + V  +++G I+ VD G++S  V  K   + +K   ++ G++ SR+
Sbjct:   30 RKSSIIGTIGPNTNSAEMISKLRQAGLNIVRMNFSHGSYEYHQSVIENARESEQQFQGRPLAIALDTKGPEIRTGVTKDDKDWDVKAGHVMLFSTNPKYKDQCDDKIMYIDYTNIVKQIDIGKIIFVDDGVLSFKVLEKIDGETLKVETLNNGKISSRK 188          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_EMENI (Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.225e-21
Identity = 59/161 (36.65%), Postives = 88/161 (54.66%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDV--PQPIILKEGQEFNFTIKRGVST---EDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKD---LVKCIVVDGGELKSRR 506
            R+T I+CTIGP T+S E I  L   G+NV R+N SHG +  HQ  ID  +E   Q   + VAI LDTKGPE+R+G+    + I +K G E N +     +T   +  + V+Y +    +  G ++ VD G++S  V     D    V+C+  + G + SR+
Sbjct:   33 RRTSIICTIGPKTNSVEKINALRRAGLNVVRMNFSHGSYEYHQSVIDHAREAEKQQAGRPVAIALDTKGPEIRTGNTVGDKDIPIKAGHEMNISTDEQYATASDDQNMYVDYKNITKVISAGKLIYVDDGILSFEVLEVVDDKTLRVRCL--NNGNISSRK 191          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.599e-21
Identity = 63/161 (39.13%), Postives = 93/161 (57.76%), Query Frame = 3
Query:   45 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVP--QPIILKEGQEFNFTIKRGV-STEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKS--KTKDLVKCIVVDGGELKSRRHL 512
            R KTKIVCT+GP++ S  M+ KL   GM+VAR N SHG +  HQ+T+D +++          A+MLDTKGPE+R+G +   +PI LK+GQE   +    +   E T+ ++Y     DV  G ++L   G +SL V S  K K  V+C   +   L  R+++
Sbjct:    6 RPKTKIVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQAMLN-TGMLCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGMVILCADGTISLKVLSCDKEKGTVRCRCENTSMLGERKNV 165          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.728e-21
Identity = 62/163 (38.04%), Postives = 92/163 (56.44%), Query Frame = 3
Query:   45 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAV--AIMLDTKGPEVRSGDV--PQPIILKEGQEFNFTIKRGV-STEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKS--KTKDLVKCIVVDGGELKSRRHL 512
            R KTKIVCT+GP++ S  MI KL   GMNVAR N SHG H  HQ+TID +++     E   +  A+MLDTKGPE+R+G +   +P+ LK+GQE   +    +   E  + ++Y     DV+   ++L   G ++  V S  K   L +C   +   L  R+++
Sbjct:   17 RPKTKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQ---AMESTGILCAVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQSVILCADGQITFTVLSCDKENGLDRCRCENTAVLGERKNV 176          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYM_RABIT (Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuniculus GN=PKM2 PE=1 SV=4)

HSP 1 Score: 100.908 bits (250), Expect = 3.563e-21
Identity = 61/169 (36.09%), Postives = 92/169 (54.44%), Query Frame = 3
Query:   36 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFED-----KAVAIMLDTKGPEVRSGDV----PQPIILKEGQEFNFTIKRGV---STEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            P   R T I+CTIGP++ S E + ++ + GMNVAR+N SHG H  H +TI  V+     F       + VA+ LDTKGPE+R+G +       + LK+G     T+         E+ + ++Y +    V+VG  + VD G++SL VK K  D +   V +GG L S++
Sbjct:   39 PITARNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLISLQVKQKGPDFLVTEVENGGFLGSKK 207          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_NEUCR (Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.653e-21
Identity = 59/159 (37.11%), Postives = 86/159 (54.09%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDV--PQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEV---GDILLVDGGMMSLAVKSKTKD-LVKCIVVDGGELKSRR 506
            R+T I+CTIGP T+S E I KL + G+NV R+N SHG +  HQ  ID  ++       + +AI LDTKGPE+R+G+    + I +  G   N T       E T+   Y D+VN  +V   G I+ VD G+++  V     D  +K    + G + SR+
Sbjct:   32 RRTSIICTIGPKTNSVEAINKLRDAGLNVVRMNFSHGSYEYHQSVIDNARQAEKVHPGRPIAIALDTKGPEIRTGNTKNDEDIPISAGTILNITTDEKYKDECTIEHMYVDYVNITKVIAPGRIIYVDDGVLAFEVLEIVDDKTIKVKARNNGYISSRK 190          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.937e-21
Identity = 63/160 (39.38%), Postives = 90/160 (56.25%), Query Frame = 3
Query:   51 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQP---IILKEGQEFNF-TIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKS--KTKDLVKCIVVDGGELKSRRHL 512
            +TKIVCTIGP T S E + KL E GMNV RLN SHG H  H + I  V+    +   K +AIMLDTKGPE+R+G +      + L  GQE    T      T   +S++Y   ++ V+VG  +L+  G++SL++ +  K K  V C V +   L   +++
Sbjct:   21 RTKIVCTIGPKTMSEEALIKLIETGMNVCRLNFSHGTHDYHGQVIKNVRSAMEK-TGKIIAIMLDTKGPEIRTGKIEDRCGYVDLFVGQEILVDTNMNQPGTSFRISIDYKGLLDSVKVGGYILIADGVISLSITAVEKEKGHVVCRVNNNSRLGENKNV 179          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.354e-20
Identity = 63/161 (39.13%), Postives = 94/161 (58.39%), Query Frame = 3
Query:   51 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE--YNSQFEDKAVAIMLDTKGPEVRSGDVP--QPIILKEGQEFNFTIKRGVSTE-DTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKD--LVKCIVVDGGELKSRRHL 512
            KTKIVCT+GP++ S EM  KL   GMNVAR N SHG H  HQ+T++ +K   +N+       A+MLDTKGPE+R+G +   +PI LKEGQE   T    +  + + +S++Y      ++ G+ +L   G ++L V S   D   V+C   +   L  R+++
Sbjct:   22 KTKIVCTLGPASRSVEMTEKLLRAGMNVARFNFSHGTHDYHQETLNNLKTAMHNTGI---LCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEMISMSYKKLPVHLKPGNTILCSDGTITLTVLSCDPDAGTVRCRCENTATLGERKNV 179          
The following BLAST results are available for this feature:
BLAST of CX293891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
KPYM_PONAB3.223e-2237.28Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2... [more]
KPYM_HUMAN3.223e-2237.28Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=... [more]
KPYK_YARLI1.225e-2135.22Pyruvate kinase OS=Yarrowia lipolytica GN=PYK1 PE=... [more]
KPYK_EMENI1.225e-2136.65Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=... [more]
KPYC_ARATH1.599e-2139.13Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYC_TOBAC2.728e-2138.04Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYM_RABIT3.563e-2136.09Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuni... [more]
KPYK_NEUCR4.653e-2137.11Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3... [more]
KPYK_DICDI7.937e-2139.38Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]
KPYC_SOYBN1.354e-2039.13Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]

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Properties
Property NameValue
Genbank descriptionC05002B09SK FlavRip1 Citrus clementina cDNA clone C05002B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293891 ID=CX293891; Name=CX293891; organism=Citrus clementina; type=EST; length=513bp
ATGGTCAGTGCACACCTGGAAAGGGAGTTGTAGGTCCAAATGCTAGAAGA
AAAACGAAGATAGTGTGTACAATTGGTCCTTCCACAAGCTCACGGGAAAT
GATATGGAAACTGGCAGAAGAGGGAATGAATGTGGCACGTTTAAATATGT
CGCATGGAGACCATGCATCACACCAGAAAACTATTGATCTCGTCAAAGAA
TACAATTCTCAATTTGAAGACAAGGCTGTAGCCATAATGCTGGACACCAA
GGGTCCTGAGGTTAGGAGTGGAGATGTACCTCAACCAATCATCCTGAAGG
AGGGTCAGGAATTTAATTTTACTATCAAAAGAGGGGTTAGCACAGAAGAT
ACTGTTAGTGTGAACTATGATGACTTTGTGAATGACGTAGAGGTTGGAGA
CATACTACTGGTAGATGGTGGAATGATGTCATTAGCTGTGAAGTCAAAGA
CAAAGGATCTGGTTAAATGCATAGTAGTTGATGGCGGTGAGCTAAAATCA
AGACGTCATTTAA
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