CX293891

Overview
NameCX293891
Unique NameCX293891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length513
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_BUCAI (Pyruvate kinase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=pykA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.921e-15
Identity = 50/159 (31.45%), Postives = 83/159 (52.20%), Query Frame = 3
Query:   39 NARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVR-SGDVPQPIILKEGQEF--NFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            N  R+TKIV T+GPST     + K+   G+NV R N SHG    H+   +  +E  ++  +  +A++ D +GP++R S  +   I L  G  F  +  + +    ++ V ++Y     D++VGD+LL+D G + L V   T   +   VV GG L + +
Sbjct:    3 NRLRRTKIVATLGPSTDINNNLEKIIRSGVNVLRFNFSHGSKDEHKSRANQAREIMTRL-NFHIALLGDLQGPKIRISKFIKNNIFLNVGDFFILDANLDQNNGNQERVGIDYKQLPYDLKVGDVLLLDDGRIQLKVIKSTGHEILTKVVIGGILSNNK 160          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_AGABI (Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.983e-15
Identity = 53/159 (33.33%), Postives = 80/159 (50.31%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE-YNSQFEDKAVAIMLDTKGPEVRSGDV--PQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEV---GDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            RKT I+ TIGP  ++ E +  +   G+N+ R+N SHG H  HQ  ID  ++   +    + VAI LDTKGPE+R+G         +K G EF  T     S      V + D+ N   V   G ++ +D G++SL + S     +    ++ G L SR+
Sbjct:   33 RKTAIIATIGPKINTVEKLTDVRLAGVNIVRMNFSHGTHEYHQSVIDNTRQMIKNDPHGRPVAIALDTKGPEIRTGQTRDGNDYPIKAGDEFIVTTDPKYSDICDNKVLFVDYANLASVTAPGKLIYIDDGIISLLILSIDGMNLHVRALNNGTLSSRK 191          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_BUCAP (Pyruvate kinase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=pykA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.110e-14
Identity = 56/161 (34.78%), Postives = 79/161 (49.07%), Query Frame = 3
Query:   39 NARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVR-SGDVPQPIILKEGQEF----NFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            N  R+TKIV T+GPST     + K+   G NV RLN SHG    H+K     KE   +  +  +A++ D +GP++R S      I LK    F    N   K G    + V ++Y    ND+ V DILL+D G + L V    K  +   V+ GG L + +
Sbjct:    3 NRVRRTKIVATLGPSTDKANNLEKIILSGANVLRLNFSHGSSEEHKKRAKKAKEIMFKL-NCHIALLGDLQGPKIRISKFKKNSIFLKVNDVFILDANLNEKNG--NNERVGIDYKKLPNDLNVNDILLLDDGRIQLKVIKIEKCAIFTKVIIGGILSNNK 160          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK2_SALTY (Pyruvate kinase II OS=Salmonella typhimurium GN=pykA PE=3 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 2.473e-14
Identity = 51/156 (32.69%), Postives = 80/156 (51.28%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQ-PIILKEGQEF--NFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            R+TKIV T+GP+T     + K+   G NV R+N SHG    H+   D V+E  ++   + VAI+ D +GP++R     +  + L  G +F  +  + +G   ++ V ++Y     DV  GDILL+D G + L V       V   V  GG L + +
Sbjct:    6 RRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKL-GRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK 160          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK2_ECOLI (Pyruvate kinase II OS=Escherichia coli (strain K12) GN=pykA PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 2.473e-14
Identity = 51/156 (32.69%), Postives = 80/156 (51.28%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQ-PIILKEGQEF--NFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            R+TKIV T+GP+T     + K+   G NV R+N SHG    H+   D V+E  ++   + VAI+ D +GP++R     +  + L  G +F  +  + +G   ++ V ++Y     DV  GDILL+D G + L V       V   V  GG L + +
Sbjct:    6 RRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSPEDHKMRADKVREIAAKL-GRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGKGEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK 160          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_AERPE (Pyruvate kinase OS=Aeropyrum pernix GN=pyk PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.196e-14
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 3
Query:   45 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFED---------KAVAIMLDTKGPEVRSGDVPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            R   KIV T+GPS+SS  ++ ++   G++VAR+N SHG           V+++NS  E          K V + +D +GP VR+G+  +P+ L++G         G      V V+   F   ++ GDI+L+D G + L V+S     VK  V++GG L  R+
Sbjct:    2 RGPVKIVATVGPSSSSASILAQMLSLGVDVARINASHGG----------VEQWNSMLESLRRAEEAVGKRVGVAVDLEGPRVRTGN-SEPVKLEKGDLVTLGFMEG-----DVPVDARQFFETIDEGDIVLLDDGKIILQVESVEGFRVKARVLEGGVLGPRK 148          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_LEIBR (Pyruvate kinase (Fragment) OS=Leishmania braziliensis PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.734e-13
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 3
Query:   60 IVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSG 272
            IVCTIGPST S E +  L + GM+VAR+N SHG H  HQ TI+ V++  ++     +AI LDTKGPE+R+G
Sbjct:   22 IVCTIGPSTQSVEALKGLIKSGMSVARMNFSHGSHEYHQTTINNVRQAAAEL-GVNIAIALDTKGPEIRTG 91          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_BUCBP (Pyruvate kinase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=pykA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.357e-12
Identity = 46/156 (29.49%), Postives = 80/156 (51.28%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDV-PQPIILKEGQEF--NFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            R+TKIV T+GPST +  ++  + + G+NV RLN SHG    H     LV     +  +  +A++ D +GP++R      + + LK    F  +  +   + T + V ++Y +   DV+  DILL+D G + L V +     +   ++ GG L + +
Sbjct:    6 RRTKIVATLGPSTDNHIILENMIKSGVNVFRLNFSHGTREEHIYRAKLVTSIAKRL-NCHIALLGDLQGPKIRICKFQDKKVFLKVNNYFILDANLNENLGTSERVGIDYKNLPKDVKKCDILLLDDGKIQLKVINIVDQEIFTKIIIGGVLSNNK 160          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK2_AGRVI (Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.315e-12
Identity = 45/155 (29.03%), Postives = 80/155 (51.61%), Query Frame = 3
Query:   48 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQ-PIILKEGQEFNFTIKR-GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRR 506
            R++KIV T+GP++SS +M+  L   G++  RLN SHG  A H +    ++    Q  D A+A++ D +GP++R G +    + L  G    F + R G    + + + + +       G  LL+D G + + +       + C V++GG L +R+
Sbjct:    7 RRSKIVATVGPASSSPDMLRSLFLAGVDTFRLNFSHGARADHAEVYRNIRAL-EQEHDAAIAVLQDLQGPKIRIGVLAHGRLDLARGSTIGFILGREGGEGMNDIPLPHREIFEVAVPGMDLLIDDGRIKVRIMEVMDGRLVCEVLNGGALSNRK 160          
BLAST of CX293891 vs. ExPASy Swiss-Prot
Match: KPYK_THEAC (Pyruvate kinase OS=Thermoplasma acidophilum GN=Ta0896 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 3.023e-12
Identity = 47/152 (30.92%), Postives = 86/152 (56.58%), Query Frame = 3
Query:   51 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQPII-LKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSR 503
            KTKIV TIGP++SS E++ ++ + G+++ R+N +H D     K   +V+  N     + V IM+D KGPE+R+G+     + +  G+++       V  +D V +N  + ++ V+VGD +L+  G +S  V+S     ++ +  + G L+ R
Sbjct:    2 KTKIVATIGPASSSPEIMKQMIDNGLSLVRINSAHADIKDVSKITQMVRSIN-----RDVGIMIDLKGPELRTGEFAGGTLKISSGKDY-------VMGKDIV-LNNMNVLSAVQVGDRILMSDGEVSFEVESTDPFTIRAL--NDGVLRDR 138          
The following BLAST results are available for this feature:
BLAST of CX293891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
KPYK_BUCAI2.921e-1531.45Pyruvate kinase OS=Buchnera aphidicola subsp. Acyr... [more]
KPYK_AGABI4.983e-1533.33Pyruvate kinase OS=Agaricus bisporus GN=pkiA PE=2 ... [more]
KPYK_BUCAP1.110e-1434.78Pyruvate kinase OS=Buchnera aphidicola subsp. Schi... [more]
KPYK2_SALTY2.473e-1432.69Pyruvate kinase II OS=Salmonella typhimurium GN=py... [more]
KPYK2_ECOLI2.473e-1432.69Pyruvate kinase II OS=Escherichia coli (strain K12... [more]
KPYK_AERPE7.196e-1432.52Pyruvate kinase OS=Aeropyrum pernix GN=pyk PE=1 SV... [more]
KPYK_LEIBR2.734e-1353.52Pyruvate kinase (Fragment) OS=Leishmania brazilien... [more]
KPYK_BUCBP1.357e-1229.49Pyruvate kinase OS=Buchnera aphidicola subsp. Baiz... [more]
KPYK2_AGRVI2.315e-1229.03Pyruvate kinase OS=Agrobacterium vitis GN=ttuE PE=... [more]
KPYK_THEAC3.023e-1230.92Pyruvate kinase OS=Thermoplasma acidophilum GN=Ta0... [more]

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Properties
Property NameValue
Genbank descriptionC05002B09SK FlavRip1 Citrus clementina cDNA clone C05002B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293891 ID=CX293891; Name=CX293891; organism=Citrus clementina; type=EST; length=513bp
ATGGTCAGTGCACACCTGGAAAGGGAGTTGTAGGTCCAAATGCTAGAAGA
AAAACGAAGATAGTGTGTACAATTGGTCCTTCCACAAGCTCACGGGAAAT
GATATGGAAACTGGCAGAAGAGGGAATGAATGTGGCACGTTTAAATATGT
CGCATGGAGACCATGCATCACACCAGAAAACTATTGATCTCGTCAAAGAA
TACAATTCTCAATTTGAAGACAAGGCTGTAGCCATAATGCTGGACACCAA
GGGTCCTGAGGTTAGGAGTGGAGATGTACCTCAACCAATCATCCTGAAGG
AGGGTCAGGAATTTAATTTTACTATCAAAAGAGGGGTTAGCACAGAAGAT
ACTGTTAGTGTGAACTATGATGACTTTGTGAATGACGTAGAGGTTGGAGA
CATACTACTGGTAGATGGTGGAATGATGTCATTAGCTGTGAAGTCAAAGA
CAAAGGATCTGGTTAAATGCATAGTAGTTGATGGCGGTGAGCTAAAATCA
AGACGTCATTTAA
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