CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_HELAN (40S ribosomal protein S3a OS=Helianthus annuus GN=RPS3A PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.004e-38 Identity = 81/97 (83.51%), Postives = 88/97 (90.72%), Query Frame = -3 Query: 156 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPADEPMPEAPTEVIGA 446 RRKMR+IMV QA +CDLK LV+KFI E GREIEKATSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSE+VGVK+DRPA+E PEA TEVIGA Sbjct: 165 RRKMREIMVTQAQTCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRPAEEAAPEA-TEVIGA 260
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A1_VITVI (40S ribosomal protein S3a-1 OS=Vitis vinifera GN=GSVIVT00020038001 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.814e-38 Identity = 78/97 (80.41%), Postives = 85/97 (87.63%), Query Frame = -3 Query: 156 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPADEPMPEAPTEVIGA 446 RRKMR+IM A SCDLK LV+KFI E GREIEKATSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSE+VG K++RPADEP+ E TEVIGA Sbjct: 165 RRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKLERPADEPVAEGVTEVIGA 261
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A2_ARATH (40S ribosomal protein S3a-2 OS=Arabidopsis thaliana GN=RPS3AB PE=2 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 1.449e-37 Identity = 79/98 (80.61%), Postives = 85/98 (86.73%), Query Frame = -3 Query: 156 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SENVGVKVDRPADEPMPEAPTEVIGA 446 RRKM +IMV +A+SCDLK LV KFI E GREIEKAT IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +E+VGVKVDRPADE M E PTE+IGA Sbjct: 165 RRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVEEPTEIIGA 262
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A1_ARATH (40S ribosomal protein S3a-1 OS=Arabidopsis thaliana GN=RPS3AA PE=1 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 3.228e-37 Identity = 79/98 (80.61%), Postives = 84/98 (85.71%), Query Frame = -3 Query: 156 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADEPMPEAPTEVIGA 446 RRKMR IMV +A+SCDLK LV KFI E GREIEKAT IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS E+VGVKVDRPADE E PTE+IGA Sbjct: 165 RRKMRDIMVREASSCDLKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMDVHGDYSAEDVGVKVDRPADEMAVEEPTEIIGA 262
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CICAR (40S ribosomal protein S3a OS=Cicer arietinum PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 7.192e-37 Identity = 75/97 (77.32%), Postives = 84/97 (86.60%), Query Frame = -3 Query: 156 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPADEPMPEAPTEVIGA 446 RRKMR+IMV QA SCDLK LV KFI E+ G+EIEKATSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSE+VG KV+ PADE + E E++GA Sbjct: 165 RRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKSPKFDLGKLMEVHGDYSEDVGTKVESPADETVVEGTPEIVGA 261
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CATRO (40S ribosomal protein S3a OS=Catharanthus roseus GN=RPS3A PE=2 SV=4) HSP 1 Score: 150.984 bits (380), Expect = 2.093e-36 Identity = 79/98 (80.61%), Postives = 87/98 (88.78%), Query Frame = -3 Query: 156 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-NVGVKVDRPADEPMPEAPTEVIGA 446 RRKMR+IMV QA SCDLK LV+KFI E GREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E ++G K+DRPA+E + E PTEVIGA Sbjct: 165 RRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDDIGTKLDRPAEEAVAE-PTEVIGA 261
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_DAUCA (40S ribosomal protein S3a OS=Daucus carota GN=cyc07 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 7.952e-36 Identity = 75/97 (77.32%), Postives = 84/97 (86.60%), Query Frame = -3 Query: 156 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPADEPMPEAPTEVIGA 446 RRKM +IM QA+SCDLK LV KFI E GREIEKATSSI+PLQNVFIRKVKILKAPKFD+GKLMEVHGDYSE+VGVK++RP +E M E TEV+GA Sbjct: 165 RRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLERPIEETMVEGETEVVGA 261
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_TOBAC (40S ribosomal protein S3a OS=Nicotiana tabacum GN=cyc07 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.356e-35 Identity = 75/97 (77.32%), Postives = 84/97 (86.60%), Query Frame = -3 Query: 156 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPADEPMPEAPTEVIGA 446 RRKM +IM QA+SCDLK LV KFI E GREIEKATSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSE+VGVK+DRPADE + EA E+ GA Sbjct: 165 RRKMVEIMRNQASSCDLKELVAKFIPESIGREIEKATSSIFPLQNVYIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRPADETVAEAEPEIPGA 261
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_BRARA (40S ribosomal protein S3a OS=Brassica rapa GN=RPS3A PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 1.833e-32 Identity = 74/99 (74.75%), Postives = 84/99 (84.85%), Query Frame = -3 Query: 156 RRKMRQIMVAQ-AASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SENVGVKVDRPADEPMPEAPTEVIGA 446 R KMR+IM+ + A+SCDLK LV KFI E G++IEKAT IYPLQNVFIRKVKILKAPKFDL KLMEVHGDY +E+VGVKVDRPADE + E PTE+IGA Sbjct: 165 RSKMREIMIKEEASSCDLKELVAKFIPESIGKDIEKATQGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAEDVGVKVDRPADE-VVEEPTEIIGA 262
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_ORYSJ (40S ribosomal protein S3a OS=Oryza sativa subsp. japonica GN=RPS3A PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 2.647e-31 Identity = 66/86 (76.74%), Postives = 77/86 (89.53%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 RRKM +IM QA+SCDLK LV KFI EV G+EIEKATSSI+PLQNVF+RKVKILKAPKFDLGKLMEVHGDY+ E++G K+DRPA++ Sbjct: 165 RRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAED 250 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |