CX308549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308549 vs. ExPASy Swiss-Prot
Match: RL7_BOVIN (60S ribosomal protein L7 OS=Bos taurus GN=RPL7 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.105e-21 Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = -3 Query: 2 IRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTY 223 IR+ R A+ G FYV E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ + Sbjct: 69 IRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAW 142
BLAST of CX308549 vs. ExPASy Swiss-Prot
Match: RL7_RAT (60S ribosomal protein L7 OS=Rattus norvegicus GN=Rpl7 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 7.973e-21 Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = -3 Query: 2 IRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTY 223 IR+ R A+ G FYV E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ + Sbjct: 81 IRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNMLRIVEPYIAW 154
BLAST of CX308549 vs. ExPASy Swiss-Prot
Match: RL7_CHICK (60S ribosomal protein L7 OS=Gallus gallus GN=RPL7 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.041e-20 Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = -3 Query: 2 KELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTY 232 ++ IR+ R A+ G +YV E KL F+IRIRGIN V PK +K+LQLLRLRQIFNG F+K+NKA++NML VEPY+ + Sbjct: 64 RQEIRMARMARKAGNYYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAW 140
BLAST of CX308549 vs. ExPASy Swiss-Prot
Match: RL7_YARLI (60S ribosomal protein L7 OS=Yarrowia lipolytica GN=RPL7 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.030e-20 Identity = 46/80 (57.50%), Postives = 62/80 (77.50%), Query Frame = -3 Query: 2 EEQKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTY 241 E ++E IRL+REAKL G FYV E KL+F+IRI+GI+ + PK +K+LQLLRL QI NGVF+++ KAT +L VEPY+ + Sbjct: 63 EAEREQIRLRREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNGVFVRITKATAELLRIVEPYIAF 142
BLAST of CX308549 vs. ExPASy Swiss-Prot
Match: RL7C_SCHPO (60S ribosomal protein L7-C OS=Schizosaccharomyces pombe GN=rpl7c PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.030e-20 Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = -3 Query: 2 QKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTY 235 ++E I L R+A+ +G +YV E KL+F+IRIRGIN + PK +KI+QLLRL QI NGVF+K NKAT ML VEPYVTY Sbjct: 67 EREQIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVTY 144
BLAST of CX308549 vs. ExPASy Swiss-Prot
Match: RL72_PARTE (60S ribosomal protein L7 2 OS=Paramecium tetraurelia GN=Rpl7-2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.964e-19 Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = -3 Query: 2 KELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTY 232 K L+ R+AK +GGFYV EAKL+ ++RIRGIN ++P+ ++ L+LL+LRQ+ N F++VNKAT+ M+ +VEPYVTY Sbjct: 66 KSLVDNLRKAKTEGGFYVPAEAKLILVVRIRGINTLNPQVRQTLRLLKLRQLHNAAFVRVNKATIEMIRKVEPYVTY 142
BLAST of CX308549 vs. ExPASy Swiss-Prot
Match: RL71_PARTE (60S ribosomal protein L7 1 OS=Paramecium tetraurelia GN=Rpl7-1 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.964e-19 Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = -3 Query: 2 KELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTY 232 K L+ R+AK +GGFYV EAKL+ ++RIRGIN ++P+ ++ L+LL+LRQ+ N F++VNKAT+ M+ +VEPYVTY Sbjct: 66 KSLVDNLRKAKTEGGFYVPAEAKLILVVRIRGINTLNPQVRQTLRLLKLRQLHNAAFVRVNKATIEMIRKVEPYVTY 142
BLAST of CX308549 vs. ExPASy Swiss-Prot
Match: RL7_ASHGO (60S ribosomal protein L7 OS=Ashbya gossypii GN=RPL7 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.565e-19 Identity = 44/78 (56.41%), Postives = 59/78 (75.64%), Query Frame = -3 Query: 2 QKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTY 235 ++ +I+ KREAK G +YV + KL+F+IRI+GIN + PK +K+LQLLRL QI +GVF+KV KAT +L VEPYV Y Sbjct: 58 ERAVIQAKREAKANGSYYVESQPKLVFVIRIKGINKIAPKPRKVLQLLRLNQINSGVFVKVTKATTELLRLVEPYVAY 135
BLAST of CX308549 vs. ExPASy Swiss-Prot
Match: RL7_NEUCR (60S ribosomal protein L7 OS=Neurospora crassa GN=rpl-7 PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 3.350e-19 Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = -3 Query: 2 QKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTY 235 ++E IRL+R AK G F++ EAKL+F+IRI+GIN + PK +KILQLLRL QI NGVF++V KAT M+ VEP+V Y Sbjct: 64 EREKIRLQRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEMIKIVEPWVAY 141
BLAST of CX308549 vs. ExPASy Swiss-Prot
Match: RL7B_SCHPO (60S ribosomal protein L7-B OS=Schizosaccharomyces pombe GN=rpl7b PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.714e-19 Identity = 44/78 (56.41%), Postives = 59/78 (75.64%), Query Frame = -3 Query: 2 QKELIRLKREAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTY 235 ++E I L R+A+ +G ++V E KL+F++RIRGIN + PK +KI+QLLRL QI NG+F+K NKA ML VEPYVTY Sbjct: 66 EREQIELARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYVTY 143 The following BLAST results are available for this feature:
BLAST of CX308549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308549 ID=CX308549; Name=CX308549; organism=Citrus clementina; type=EST; length=243bpback to top |