CX308587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.764e-11 Identity = 36/85 (42.35%), Postives = 48/85 (56.47%), Query Frame = 1 Query: 1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255 L L N ++G IP ELG L L ++D+ N+ GEIP S L L +LRL+ N L+G +P + LS L D+S N L G P Sbjct: 108 LLLQNNQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLSFLDLSFNNLSGPTP 192
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11 Identity = 45/110 (40.91%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 1 LELYMNDISGKIPKELGN-LKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFE-NNKLNGPEL 324 L+L ND+SG IP ++ + L LV++D+ NKL G IP K L L L++NKL+GSIP +L+ L L+ ++ N L GTIP + F + F NN L G L Sbjct: 101 LDLSGNDLSGSIPSQICSWLPYLVTLDLSGNKLGGSIPTQIVECKFLNALILSDNKLSGSIPSQLSRLDRLRRLSLAGNDLSGTIPSE--LARFGGDDFSGNNGLCGKPL 208
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11 Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD-GPFRSFPMESFENNKLNG 315 + + + I G + ELG + L + ++ N L G IPK NLK+LK L L NN L G IP E+ +LS + + ++ +NGL G +P + G + + N+L G Sbjct: 74 INISASSIKGFLAPELGQITYLQELILHGNILIGTIPKEIGNLKNLKILDLGNNHLMGPIPAEIGSLSGIMIINLQSNGLTGKLPAELGNLKYLRELHIDRNRLQG 179
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11 Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 22 ISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPELQGLVP 339 I+G+IP + +L SL +D+ NK+ GEIP L L L L N+++G IP LT+L +LK +++ NG+ G IP D F S M S L EL G +P Sbjct: 123 ITGEIPPCITSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIPAD--FGSLKMLS--RVLLGRNELTGSIP 224 HSP 2 Score: 68.1662 bits (165), Expect = 3.008e-11 Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 16 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255 N+++G IP+ + ++ L +D+ +N +EG IP+ N+K L L L+ N LTG IP L + S L V ++S N L GTIP Sbjct: 217 NELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIP 296
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.008e-11 Identity = 44/113 (38.94%), Postives = 60/113 (53.10%), Query Frame = 1 Query: 19 DISGKIPKELGNLKSLVSMDMYQ-NKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD-GPFRSFPMESFENNKLNGPELQGLVPYDFG 351 +ISG+IP E+G+L L S+ + L G I + A LK+L FLRL+ LTG +P L+ L +L+ D+S N L G+IP R NKL GP +P FG Sbjct: 81 EISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGP-----IPESFG 188 HSP 2 Score: 67.0106 bits (162), Expect = 6.702e-11 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSD-LKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNG 315 L L +++G +P+ L LK+L +D+ N L G IP S ++L+ L++L L+ NKLTG IP T S + +S+N L GTIP F NKL G Sbjct: 124 LRLSWTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGPIPESFGTFSGKVPSLFLSHNQLSGTIPKSLGNPDFYRIDLSRNKLQG 229
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.131e-11 Identity = 48/118 (40.68%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPEL-----QGLVP 339 L L N SG+IP+ L +L +LV +++ +N+ GEI F NL LK L L NNKL+GS+ L L F+VSNN L G+IP + F +SF L G L +G VP Sbjct: 124 LYLQGNRFSGEIPEVLFSLSNLVRLNLAENEFSGEISSGFKNLTRLKTLYLENNKLSGSL---LDLDLSLDQFNVSNNLLNGSIPKS--LQKFDSDSFVGTSLCGKPLVVCSNEGTVP 236
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.702e-11 Identity = 40/80 (50.00%), Postives = 51/80 (63.75%), Query Frame = 1 Query: 16 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255 N + GKIP EL N K LVS+ + N GEIP S A+L L +L L++N LTG IP+ L L L +F+VS NGL G +P Sbjct: 423 NRLLGKIP-ELKNCKKLVSLSLAGNAFTGEIPPSLADLHVLTYLDLSDNSLTGLIPQGLQNLK-LALFNVSFNGLSGEVP 500
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 6.702e-11 Identity = 28/85 (32.94%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 255 +++Y ++ G IP++L L+ L ++++ QN L G +P + NL ++++ N L+G IP+E+ L+DL++ +S+N G+IP Sbjct: 103 IKVYAMEVVGSIPQQLWTLEYLTNLNLGQNVLTGSLPPALGNLTRMRWMTFGINALSGPIPKEIGLLTDLRLLSISSNNFSGSIP 187
BLAST of CX308587 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.753e-11 Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = 1 Query: 4 ELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANL-KSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD-GPFRSFPMESFENNKLNGPELQGL 333 ++ +N SG P L N+ SL S+ + N G + F L +L+ L L N+ TG+IP+ L +S L+ FD+S+N L G+IP+ G R+ NN L GL Sbjct: 223 QIALNSFSGGFPPALYNISSLESLSLADNSFSGNLRADFGYLLPNLRRLLLGTNQFTGAIPKTLANISSLERFDISSNYLSGSIPLSFGKLRNLWWLGIRNNSLGNNSSSGL 334 HSP 2 Score: 66.6254 bits (161), Expect = 8.753e-11 Identity = 38/112 (33.93%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 1 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD-GPFRSFPMESFENNKLNGPELQGL 333 ++LY N ISG+IP GN+ L + + N G IP+S + L L ++ N+L G+IP+E+ + L D+SNN L G P + G NKL+G Q + Sbjct: 422 VDLYSNAISGEIPSYFGNMTRLQKLHLNSNSFHGRIPQSLGRCRYLLDLWMDTNRLNGTIPQEILQIPSLAYIDLSNNFLTGHFPEEVGKLELLVGLGASYNKLSGKMPQAI 533 The following BLAST results are available for this feature:
BLAST of CX308587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308587 ID=CX308587; Name=CX308587; organism=Citrus clementina; type=EST; length=547bpback to top |