CX308861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308861 vs. ExPASy Swiss-Prot
Match: EF1G_RABIT (Elongation factor 1-gamma OS=Oryctolagus cuniculus GN=EEF1G PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.420e-16 Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = -3 Query: 12 NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHL 350 +F G TN++PEFL+ P GKVP E DG VFESNAIA YV+ + +L GS+ A V QW+ F+ +I S W++P LG M + A E A +KR L L+ HL Sbjct: 37 HFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDAHL 146
BLAST of CX308861 vs. ExPASy Swiss-Prot
Match: EF1G_MOUSE (Elongation factor 1-gamma OS=Mus musculus GN=Eef1g PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.420e-16 Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = -3 Query: 12 NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHL 350 +F G TN++PEFL+ P GKVP E DG VFESNAIA YV+ + +L GS+ A V QW+ F+ +I S W++P LG M + A E A +KR L L+ HL Sbjct: 37 HFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVKRILGLLDTHL 146
BLAST of CX308861 vs. ExPASy Swiss-Prot
Match: EF1G_PIG (Elongation factor 1-gamma (Fragment) OS=Sus scrofa GN=EEF1G PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.467e-16 Identity = 50/114 (43.86%), Postives = 65/114 (57.02%), Query Frame = -3 Query: 12 NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHL 350 +F G TN +PEFL+ P GKVP E DG VFESNAIA YV+ + +L GS+ A V QW+ F+ +I S W++P LG M Y A E A ++R L L+ HL Sbjct: 32 HFHFGQTNHTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHYNKQATENAKDEVRRVLGLLDAHL 141
BLAST of CX308861 vs. ExPASy Swiss-Prot
Match: EF1G_MACFA (Elongation factor 1-gamma OS=Macaca fascicularis GN=EEF1G PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.620e-16 Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = -3 Query: 12 NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHL 350 +F G TN++PEFL+ P GKVP E DG VFESNAIA YV+ + +L GS+ A V QW+ F+ +I S W++P LG M + A E A ++R L L+ HL Sbjct: 37 HFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHL 146
BLAST of CX308861 vs. ExPASy Swiss-Prot
Match: EF1G_HORSE (Elongation factor 1-gamma OS=Equus caballus GN=EEF1G PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.620e-16 Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = -3 Query: 12 NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHL 350 +F G TN++PEFL+ P GKVP E DG VFESNAIA YV+ + +L GS+ A V QW+ F+ +I S W++P LG M + A E A ++R L L+ HL Sbjct: 37 HFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHL 146
BLAST of CX308861 vs. ExPASy Swiss-Prot
Match: EF1G_BOVIN (Elongation factor 1-gamma OS=Bos taurus GN=EEF1G PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.620e-16 Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = -3 Query: 12 NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHL 350 +F G TN++PEFL+ P GKVP E DG VFESNAIA YV+ + +L GS+ A V QW+ F+ +I S W++P LG M + A E A ++R L L+ HL Sbjct: 37 HFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAHL 146
BLAST of CX308861 vs. ExPASy Swiss-Prot
Match: EF1G_DANRE (Elongation factor 1-gamma OS=Danio rerio GN=eef1g PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.300e-15 Identity = 53/125 (42.40%), Postives = 70/125 (56.00%), Query Frame = -3 Query: 12 GVEVKLAEN---FEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHL 374 G +K+A F G TN+SP FL PLGKVP + DG +FESNAIA Y++ ++ L GS+ A V QW+ F+ E+ S W++P LG MQ+ A E A +KR L LN HL Sbjct: 26 GARLKIASAPPAFTFGQTNRSPAFLGNFPLGKVPAYQGDDGFCLFESNAIAHYLS----NDVLRGSTPQASAQVLQWVSFADSEVIPPASAWVFPTLGIMQFNKQATEQAKEEVKRVLAVLNQHL 146
BLAST of CX308861 vs. ExPASy Swiss-Prot
Match: EF1G_CARAU (Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.300e-15 Identity = 53/125 (42.40%), Postives = 70/125 (56.00%), Query Frame = -3 Query: 12 GVEVKLAEN---FEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHL 374 G +K+A F G TN+SP FL PLGKVP + DG +FESNAIA +++ ++ L GS+ A V QW+ F+ EI S W++P LG MQ+ A E A +KR L LN HL Sbjct: 26 GARLKIASASPAFTFGQTNRSPAFLSNFPLGKVPAYQGDDGFCLFESNAIAHFLS----NDALRGSTPQASAQVLQWVSFADSEIIPPASAWVFPTLGIMQFNKQATEQAKEEVKRVLAVLNQHL 146
BLAST of CX308861 vs. ExPASy Swiss-Prot
Match: EF1G_HUMAN (Elongation factor 1-gamma OS=Homo sapiens GN=EEF1G PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.782e-15 Identity = 48/114 (42.11%), Postives = 66/114 (57.89%), Query Frame = -3 Query: 12 NFEMGVTNKSPEFLKMNPLGKVPVLETPDG-PVFESNAIARYVARLKADNQLCGSSLIDYAHVEQWMDFSAMEIDANISRWLYPRLGYMQYIPLAEEGAVAALKRALDALNIHL 350 +F G TN++PEFL+ P GKVP E DG VFESNAIA YV+ + +L GS+ A V QW+ F+ +I S W++P LG M + A E A ++R L L+ +L Sbjct: 37 HFHFGQTNRTPEFLRKFPAGKVPAFEGDDGFCVFESNAIAYYVS----NEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGIMHHNKQATENAKEEVRRILGLLDAYL 146
BLAST of CX308861 vs. ExPASy Swiss-Prot
Match: EF1G_DROME (Elongation factor 1-gamma OS=Drosophila melanogaster GN=Ef1gamma PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.623e-13 Identity = 50/116 (43.10%), Postives = 67/116 (57.76%), Query Frame = -3 Query: 39 GVEVKLAENFEMGVTNKSPEFLKMNPLGKVPVLETPDGP-VFESNAIARYVARLKADNQLCGSSL-IDYAHVEQWMDFSAMEIDANISRWLYPRLGYM--QYIPLAEEGAVAALKR 374 G +VK+A+NF+ G TNKS EFLK P GKVP ET +G + ESNAI A L A+ QL G A V+QW+ F+ EI W++P LG + Q A++ A A L++ Sbjct: 26 GAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFETAEGQYLSESNAI----AYLLANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLLGILPQQKNSTAKQEAEAVLQQ 137 The following BLAST results are available for this feature:
BLAST of CX308861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308861 ID=CX308861; Name=CX308861; organism=Citrus clementina; type=EST; length=376bpback to top |