CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYM_KLULA (Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis GN=SHM1 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.482e-52 Identity = 105/207 (50.72%), Postives = 136/207 (65.70%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL-XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN Y+ ++ DR+MGLD P GGHLSHGY P G K+S S +F++ PY V+ QTG IDY+ L + + +RPK+++ G S+Y R DY RF++IAD CGA LM DMAHISGL+AA SPF+Y DIVT+TTHKSL +K K+G + YD ++RINF+V P QGGPHN+ I+ALA+ALKQ ATP Sbjct: 138 ANLYAYSAVMETNDRLMGLDLPHGGHLSHGYQLPSGTKISYISKYFQTMPYHVDSQTGIIDYDFLSKTSKLFRPKVIVAGASAYSRVLDYKRFKEIADACGAYLMSDMAHISGLVAAGVTRSPFEYSDIVTTTTHKSLRGPRGAMIFYRKGVRKVTKKGKEV-------LYDLDKRINFSVFPGHQGGPHNHTISALAVALKQAATP 337
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.482e-52 Identity = 103/207 (49.76%), Postives = 137/207 (66.18%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL-XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN Y+ ++ GDR+MGLD P GGHLSHGY G K+S S +F++ Y+V+P TG +DY+ L E + +RPK+++ G S+Y R DY RFR+IAD CGA L+ DMAH+SGL+AA SPF+Y DIVT+TTHKSL +K K+G + YD ++RINF+V P+ QGGPHN+ I+ALA+ALKQ ATP Sbjct: 137 ANLYAYSAIMEVGDRMMGLDLPHGGHLSHGYQLQNGNKISYISKYFQTMAYRVDPATGLVDYDTLSETSKLFRPKVIVAGTSAYARVLDYKRFREIADACGAYLLSDMAHVSGLVAAGVHPSPFEYSDIVTTTTHKSLRGPRGAMIFYRKGIRKVTKKGTEI-------MYDLDKRINFSVFPAHQGGPHNHTISALAVALKQAATP 336
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.482e-52 Identity = 109/207 (52.66%), Postives = 135/207 (65.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL-XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY ++ P R+MGLD PSGGHLSHGY T KK+SA S +FES PY+V+P TG IDY+ LE A +RPKIL+ G S+Y R DY R RQIAD A L+ DMAHISGL++A + SPF+Y D+VT+TTHKSL +K K+G P+ YD E++INF+V P QGGPHN+ I ALA+ALKQ P Sbjct: 109 ANMQVYQAIMPPHGRLMGLDLPSGGHLSHGYQTDT-KKISAVSTYFESMPYRVDPNTGLIDYDMLEHDAQLFRPKILVAGTSAYCRLIDYARMRQIADSVNAYLVVDMAHISGLVSAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRRGLRKHDKKGNPI-------YYDLEDKINFSVFPGHQGGPHNHTITALAVALKQCQEP 307
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYC_MOUSE (Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1 PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 4.548e-52 Identity = 110/205 (53.66%), Postives = 137/205 (66.83%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 ANFAVYT L+ P RIMGLD P GGHL+HG+ T KK+SA SIFFES PYKV P+TGYI+Y++LEE A + PK++I G S Y R DY R R+IAD GA LM DMAHISGL+AA + SPF++C +VT+TTHK+L +K + P + + Y+ E IN AV P LQGGPHN+ IA +A+ALKQ T Sbjct: 117 ANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDK-KKISATSIFFESMPYKVYPETGYINYDQLEENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTL---RGCRAGMIFYRKGVRSVDPKTGKE--TYYELESLINSAVFPGLQGGPHNHAIAGVAVALKQAMT 315
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.728e-51 Identity = 102/207 (49.28%), Postives = 134/207 (64.73%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPR-KQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN Y ++ P DR+MGLD P GGHLSHG+ TP K +SA S +F + PY VN +TG IDY+ LE+ A+ +RPK+++ G S+Y R DY R R+I + C A L+CDMAHISGL+AA + SPF+Y DIVT+TTHKSL + K+G P+ Y+ E++INF+V P QGGPHN+ I ALA+AL Q TP Sbjct: 115 ANLQAYQAVMKPHDRLMGLDLPHGGHLSHGFSTPQ-KAISAVSTYFSTMPYNVNKETGIIDYDSLEKAAIQFRPKVIVAGASAYARLVDYKRMRKITEMCNAYLLCDMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFYRKGTRSHDKRGNPI-------LYELEDKINFSVFPGHQGGPHNHTITALAVALGQAKTP 313
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3) HSP 1 Score: 202.216 bits (513), Expect = 1.728e-51 Identity = 112/214 (52.34%), Postives = 137/214 (64.02%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSN--------YDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY ++ P +R+MGLD P GGHLSHGY T +K+SA S +FE+ PY+V+ +TG IDY+ LE+ A+ YRPK+L+ G S+Y R DY R R+IADK GA L+ DMAHISGLIAA + SPF+Y DIVT+TTHKSL + PR I G N YD E INF+V P QGGPHN+ IAALA ALKQ TP Sbjct: 115 ANLQVYQAIMKPHERLMGLDLPHGGHLSHGYQTDS-RKISAVSTYFETMPYRVDLETGLIDYDMLEKTAVLYRPKVLVAGTSAYCRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSL-------------RGPRGAMIFFRRGVRSVNPKTGQEILYDLENPINFSVFPGHQGGPHNHTIAALATALKQANTP 314
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYM_NEUCR (Putative serine hydroxymethyltransferase, mitochondrial OS=Neurospora crassa GN=NCU05805 PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 5.029e-51 Identity = 110/213 (51.64%), Postives = 136/213 (63.85%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSN-------YDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY+ L+ DR+MGLD P GGHLSHGY TP KK+S S +FE+ PY+++ +TGYIDY KLEE A+ YRPKI++ G S+Y R DY R R+I DK A LM DMAHISGL+AAK + PF + DIVT+T+HKSL + PR I G +N Y+ E IN +V P QGGPHN+ IAALA+ALKQ TP Sbjct: 152 ANLYVYSALMDTHDRLMGLDLPHGGHLSHGYQTPT-KKISFISKYFETLPYRLDEKTGYIDYNKLEELAITYRPKIIVAGASAYSRLIDYARLREICDKVNAYLMADMAHISGLVAAKVMPGPFTHADIVTTTSHKSL-------------RGPRGAMIFFRRGVRRTNKKGEEELYNLETPINASVFPGHQGGPHNHTIAALAVALKQAQTP 350
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.120e-50 Identity = 103/207 (49.76%), Postives = 134/207 (64.73%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSN-YDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN Y+ ++ GDR+MGLD P GGHLSHGY P G K+S S +F + PY VN +TG IDY+ L + +RPK+++ G S+Y R+ DY RFR+IAD CGA L+ DMAHISGL+AA + SPF++ DIVT+TTHKSL RK +N G + F++ INF+V P QGGPHN+ I+ALA+ALKQ TP Sbjct: 124 ANLYAYSAVMEVGDRLMGLDLPHGGHLSHGYQLPSGTKISYISKYFNTMPYHVNTETGIIDYDTLAMTSKLFRPKVIVAGTSAYSRKLDYARFRKIADGCGAYLLSDMAHISGLVAANVIDSPFEHSDIVTTTTHKSLRGPRGAMIFY------RKGIKKVNKKTGKETPFTFDKTINFSVFPGHQGGPHNHTISALAVALKQAKTP 324
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYC_NEUCR (Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa GN=for PE=3 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.113e-49 Identity = 107/214 (50.00%), Postives = 136/214 (63.55%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSN--------YDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY ++ R+MGLD P GGHLSHGY TP +K+SA S +FE+ PY+VN TG IDY+ LE+ A +RPK+L+ G S+Y R DY R R+IAD GA L+ DMAHISGLIA++ + SPF Y D+VT+TTHKSL + PR I G + YD E++INF+V P QGGPHN+ I ALA+ALKQ A+P Sbjct: 115 ANLQVYQAIMPVHGRLMGLDLPHGGHLSHGYQTPQ-RKISAVSTYFETMPYRVNIDTGLIDYDTLEKNAQLFRPKVLVAGTSAYCRLIDYERMRKIADSVGAYLVVDMAHISGLIASEVIPSPFLYADVVTTTTHKSL-------------RGPRGAMIFFRRGVRSVDAKTGKETLYDLEDKINFSVFPGHQGGPHNHTITALAVALKQAASP 314
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYM_YEAST (Serine hydroxymethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=SHM1 PE=1 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 3.051e-48 Identity = 98/207 (47.34%), Postives = 132/207 (63.77%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL-XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY+ ++ G+R+MGLD P GGHLSHGY G +S S +F+S PY V+ TG IDY+ L+ A +RPK+++ G S+Y R DY RF++I+ CGA LM DMAHISGL+AA + SPF++ DIVT+TTHKSL K K+G + Y+ E++INF+V P QGGPHN+ I A+A+ALKQ +P Sbjct: 130 ANLYVYSAIMNVGERLMGLDLPDGGHLSHGYQLKSGTPISFISKYFQSMPYHVDHTTGLIDYDNLQVLAKAFRPKVIVAGTSAYSRLIDYARFKEISQGCGAYLMSDMAHISGLVAANVVPSPFEHSDIVTTTTHKSLRGPRGAMIFFRKGIKSVTKKGKEI-------PYELEKKINFSVFPGHQGGPHNHTIGAMAVALKQAMSP 329 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |