CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_WOLWR (Serine hydroxymethyltransferase OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=glyA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 7.794e-36 Identity = 86/206 (41.75%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD I+GL GGHL+HG S + +F+S Y VN T +D +++E+ A++++PK++I G S+YPR+ D+ RFR+IADK GA L+ D+AH +GLIAA E SP +Y ++TSTTHK+L + PR GI + + + ++I AV P LQGGP + IAA A+A K+ P Sbjct: 108 ANQAVFASLLTPGDTILGLSLSCGGHLTHG------AAPSLSGKWFKSIQYTVNKDTYLLDMDEIEKLALEHKPKLIIAGASAYPRKMDFKRFREIADKVGAYLLADIAHYAGLIAAGEYPSPAEYAHVMTSTTHKTL-------------RGPR-GGIVMTNDE-----ILHKKIQSAVFPGLQGGPLMHVIAAKAVAFKEALAP 288
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CELJU (Serine hydroxymethyltransferase OS=Cellvibrio japonicus (strain Ueda107) GN=glyA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 7.794e-36 Identity = 84/206 (40.78%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY L PGD ++G+ GGHL+HG KV+ + + + Y +NP+TG +DY+++E A++++PK+++ G S+Y + D+ RFR IADK GA LM DMAH++GL+AA +P D+ TSTTHK+L + PR GI L +N + E+++N AV P QGGP + IAA AI+ K+ TP Sbjct: 101 ANTAVYAALCAPGDTVLGMSLAHGGHLTHG------AKVNFSGKIYNAVQYGLNPETGLVDYDEVERLALEHKPKMIVAGFSAYSQVLDWQRFRDIADKVGAYLMVDMAHVAGLVAAGLYPNPVQIADVTTSTTHKTL-------------RGPR-GGIIL----AKANEEIEKKLNSAVFPGGQGGPLMHVIAAKAISFKEAMTP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PROM2 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9215) GN=glyA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.018e-35 Identity = 83/206 (40.29%), Postives = 124/206 (60.19%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD IMG+D GGHL+HG V+ + +F + Y VN +T ++++++ E A++ +PK++ICG S+YPR D+ FR IAD+ GA LM D+AHI+GL+A+K +P YCD+VT+TTHK+L + PR G+ L C + +F ++ + +V P QGGP + IAA A+A + P Sbjct: 100 ANAAVFLSLLKPGDTIMGMDLSHGGHLTHG------SPVNMSGKWFNAVHYGVNKETSELNFDEIREIALETKPKLIICGYSAYPRTIDFESFRNIADEVGAFLMADIAHIAGLVASKLHPNPIPYCDVVTTTTHKTL-------------RGPR-GGLIL-----CKDAEFGKKFDKSVFPGTQGGPLEHIIAAKAVAFGEALQP 280
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PROM0 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9301) GN=glyA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.018e-35 Identity = 83/206 (40.29%), Postives = 124/206 (60.19%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD IMG+D GGHL+HG V+ + +F + Y VN +T ++++++ E A++ +PK++ICG S+YPR D+ FR IAD+ GA LM D+AHI+GL+A+K +P YCD+VT+TTHK+L + PR G+ L C + +F ++ + +V P QGGP + IAA A+A + P Sbjct: 100 ANAAVFLSLLKPGDTIMGMDLSHGGHLTHG------SPVNMSGKWFNAVHYGVNKETSELNFDEIREIALETKPKLIICGYSAYPRTIDFESFRNIADEVGAFLMADIAHIAGLVASKLHPNPIPYCDVVTTTTHKTL-------------RGPR-GGLIL-----CKDAEFGKKFDKSVFPGTQGGPLEHIIAAKAVAFGEALQP 280
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CAMHC (Serine hydroxymethyltransferase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=glyA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.018e-35 Identity = 83/206 (40.29%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY + PGD+I+G+D +GGHL+HG KV+A+ F+ SF Y V G IDY ++ + A +PK+++CG S+YPRE D+ +FR+IAD GA L D+AHI+GL+ A E +PF YC +V+STTHK+L + PR I N +F ++IN ++ P +QGGP + IA A+ K +P Sbjct: 97 ANQGVYGAFIKPGDKILGMDLSNGGHLTHG------AKVNASGKFYSSFFYGVE-MDGRIDYNRVADIAKIVKPKLIVCGASAYPREIDFAKFREIADSVGAFLFADVAHIAGLVVAGEHTNPFPYCHVVSSTTHKTL-------------RGPRGGIIMTN------EEEFAKKINSSIFPGMQGGPLVHVIAGKAVGFKHNLSP 276
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_BACFR (Serine hydroxymethyltransferase OS=Bacteroides fragilis GN=glyA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.018e-35 Identity = 88/212 (41.51%), Postives = 119/212 (56.13%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL------XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ +L PGD+ MGL+ GGHLSHG V+ + I + Y + +TG +DY+++EE A+ +PK++I GGS+Y REWDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+L KK K I + + ++ AV P +QGGP + IAA A+A + P Sbjct: 93 ANAAVFLAVLNPGDKFMGLNLAHGGHLSHG------SLVNTSGIIYTPCEYNLKQETGRVDYDQMEEVALREKPKMIIGGGSAYSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVIMMGKDFPNPWGKKTPKGEIKM----------MSQLLDSAVFPGIQGGPLEHVIAAKAVAFGECLQP 288
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_BACFN (Serine hydroxymethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=glyA PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.018e-35 Identity = 88/212 (41.51%), Postives = 119/212 (56.13%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL------XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ +L PGD+ MGL+ GGHLSHG V+ + I + Y + +TG +DY+++EE A+ +PK++I GGS+Y REWDY R R+IADK GA+LM DMAH +GLIAA L +P Y IVTSTTHK+L KK K I + + ++ AV P +QGGP + IAA A+A + P Sbjct: 93 ANAAVFLAVLNPGDKFMGLNLAHGGHLSHG------SLVNTSGIIYTPCEYNLKQETGRVDYDQMEEVALREKPKMIIGGGSAYSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHIVTSTTHKTLRGPRGGVIMMGKDFPNPWGKKTPKGEIKM----------MSQLLDSAVFPGIQGGPLEHVIAAKAVAFGECLQP 288
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_WOLPM (Serine hydroxymethyltransferase OS=Wolbachia pipientis wMel GN=glyA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.329e-35 Identity = 85/206 (41.26%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD I+GL GGHL+HG S + +F+S Y VN T ++ +++E+ A++++PK++I G S+YPR+ D+ RFR+IADK GA L+ D+AH +GLIAA E SP +Y ++TSTTHK+L + PR GI + + + ++I AV P LQGGP + IAA A+A K+ P Sbjct: 108 ANQAVFASLLTPGDTILGLSLSCGGHLTHG------AAPSLSGKWFKSIQYTVNKDTYLLNMDEIEKLALEHKPKLIIAGASAYPRKMDFKRFREIADKVGAYLLADIAHYAGLIAAGEYPSPAEYAHVMTSTTHKTL-------------RGPR-GGIVMTNDEA-----LHKKIQSAVFPGLQGGPLMHVIAAKAVAFKEALAP 288
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_THICR (Serine hydroxymethyltransferase OS=Thiomicrospira crunogena (strain XCL-2) GN=glyA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.329e-35 Identity = 83/206 (40.29%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY LL PGD ++G+ GGHL+HG H VS + + + Y +NP+TG IDY+++E A +++PK++I G S+Y + D+ +FR+IAD GA LM DMAH++GL+AA E +P D+ T+TTHK+L + PR G+ L SN + E+++N A+ P QGGP + IAA A+A K+ P Sbjct: 101 ANAPVYMALLEPGDTVLGMSLAHGGHLTHGSH------VSFSGKMYNAVQYGLNPETGVIDYDEVERLAKEHKPKMIIAGFSAYSQVVDWQKFREIADAVGAYLMVDMAHVAGLVAAGEYPNPVQIADVTTTTTHKTL-------------RGPR-SGLIL----AKSNPEIEKKLNSAIFPGAQGGPLMHVIAAKAVAFKEAMEP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PROMS (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain AS9601) GN=glyA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.329e-35 Identity = 82/206 (39.81%), Postives = 125/206 (60.68%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV+ LL PGD IMG+D GGHL+HG V+ + +F + Y VN +T ++++++ E A++ +PK++ICG S+YPR D+ FR IAD+ GA LM D+AHI+GL+A+K +P +CD+VT+TTHK+L + PR G+ L C + +F ++ + +V P QGGP + IAA A+A ++ P Sbjct: 100 ANAAVFLSLLKPGDTIMGMDLSHGGHLTHG------SPVNMSGKWFNAVHYGVNKETSELNFDEIREIALEKKPKLIICGYSAYPRTIDFESFRNIADEVGAFLMADIAHIAGLVASKLHPNPIPHCDVVTTTTHKTL-------------RGPR-GGLIL-----CKDAEFGKKFDKSVFPGTQGGPLEHIIAAKAVAFREALQP 280 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |