CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_LEGPA (Serine hydroxymethyltransferase OS=Legionella pneumophila (strain Paris) GN=glyA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.268e-35 Identity = 85/206 (41.26%), Postives = 118/206 (57.28%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AV LL PGD MG+ P GGHL+HG KV+ + + S Y V+ TG IDY+ LE+ A+ ++PK++I G S+Y R D+ RFR+IADK GA LM D+AH++GL+A SP Y D+VT+TTHK+L + PR I N + E+++N +V P +QGGP + IAA A+A + P Sbjct: 101 ANAAVMMALLSPGDTFMGMALPHGGHLTHG------SKVNFSGKLYHSVEYGVDSNTGLIDYDALEKLALQHKPKLIIAGFSAYSRILDWARFREIADKVGAYLMADIAHVAGLVAVGLYPSPVPYADVVTTTTHKTL-------------RGPRGGLILCK-----ENEEIEKKLNSSVFPGMQGGPLMHVIAAKAVAFAEALLP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PROMT (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain NATL2A) GN=glyA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.962e-35 Identity = 82/206 (39.81%), Postives = 127/206 (61.65%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMG+D GGHL+HG V+ + +F++ Y+V+ +T +D + + +KA++ +PK++ICG S+YPR+ D+ FR IAD+ A L+ D+AHI+GL+A+ SP YCD+VT+TTHK+L + PR G+ L+ + + ++++ AV P QGGP + IAA A+A K+ + P Sbjct: 93 ANFAVFLSLLKPGDTIMGMDLSHGGHLTHG------SPVNVSGKWFKTCHYEVDKKTEMLDMDAIRKKAIENQPKLIICGFSAYPRKIDFKAFRSIADEVNAYLLADIAHIAGLVASGLHPSPIPYCDVVTTTTHKTL-------------RGPR-GGLILS-----KDKEIGKKLDKAVFPGTQGGPLEHVIAAKAVAFKEASAP 273
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PROM4 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9211) GN=glyA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.962e-35 Identity = 85/206 (41.26%), Postives = 122/206 (59.22%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANF+V+ LL PG++IMG+D GGHL+HG V+ + +F++ Y V+ +T ++ E + E A+ RPK++ICG S+YPR D+ FR IAD+ GA L+ DMAHI+GL+A SP +CD+VT+TTHK+L + PR G+ L C N +F +R + AV P QGGP + IAA A+A + P Sbjct: 101 ANFSVFLSLLEPGEKIMGMDLSHGGHLTHG------SPVNVSGKWFKAIHYGVDKETQRLEMENVREIALKNRPKLIICGYSAYPRNIDFLAFRSIADEVGAYLLADMAHIAGLVATGIHPSPIPHCDVVTTTTHKTL-------------RGPR-GGLIL-----CRNAEFGKRFDKAVFPGSQGGPLEHVIAAKAVAFGEALKP 281
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA1_AGRT5 (Serine hydroxymethyltransferase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glyA1 PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.962e-35 Identity = 85/205 (41.46%), Postives = 116/205 (56.59%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V +D +++E KA + RPK+++ GG++Y R WD+ RFR+IAD+ GA LM DMAHI+GL+A + SPF +C + T+TTHKSL + PR I N + D ++ N AV P LQGGP + IAA A+A + P Sbjct: 106 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNMSGKWFNVVSYGVREGDNLLDMDEVERKAKETRPKLILAGGTAYSRVWDWKRFREIADEVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSL-------------RGPRGGMILTN------DEDLAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALQP 285
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_METCA (Serine hydroxymethyltransferase OS=Methylococcus capsulatus GN=glyA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.052e-35 Identity = 85/206 (41.26%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL PGD ++G+ GGHL+HG KV+ + + + Y +NP+TG IDY++++E A ++RPK+++ G S+Y + D+ RFR IAD GA LM DMAH++GLIAA SP D+ T+TTHK+L + PR G+ L +N + E+++N V P +QGGP + IAA A+ALK+ P Sbjct: 101 ANAAVYMALLKPGDTVLGMSLAHGGHLTHG------AKVNFSGKIYNAVQYGLNPETGEIDYDQVDELAREHRPKMIVAGFSAYSQVVDWQRFRAIADSVGAWLMVDMAHVAGLIAAGLYPSPVQIADVTTTTTHKTL-------------RGPR-GGLIL----AKANPEVEKQLNSLVFPGIQGGPLMHVIAAKAVALKEALQP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_HELPS (Serine hydroxymethyltransferase OS=Helicobacter pylori (strain Shi470) GN=glyA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.052e-35 Identity = 86/206 (41.75%), Postives = 124/206 (60.19%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL P D+I+G+D GGHL+HG KVS ++SF Y VN GYIDYE+ + A +P+I++CG S+YPRE D+ +FR+IAD+ GA+L+ D+AH++GL+ A E A PF +C +V+STTHK+L + PR G+ L + + + +I+ A+ P QGGP + IAA A+ K+ P Sbjct: 98 ANNAVYHALLKPYDKILGMDLSCGGHLTHG------AKVSLTGKHYQSFSYGVNLD-GYIDYEEALKIAQSVKPEIIVCGFSAYPREIDFKKFREIADEVGALLLGDIAHVAGLVVAGEHAHPFPHCHVVSSTTHKTL-------------RGPR-GGLILTNDE-----EIAAKIDKAIFPGTQGGPLMHAIAAKAVGFKENLKP 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_AGRRK (Serine hydroxymethyltransferase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glyA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.052e-35 Identity = 86/205 (41.95%), Postives = 115/205 (56.10%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V +D E ++ KA + +PK++I GG++Y R WD+ RFR+IAD GA LM DMAHI+GL+A + SPF +C + T+TTHKSL + PR I N + D ++ N AV P LQGGP + IAA A+AL + P Sbjct: 108 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNMSGKWFNVVSYGVREGDNLLDMEAVQRKAEETKPKLIIAGGTAYSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSL-------------RGPRGGMILTN------DEDLAKKFNSAVFPGLQGGPLMHVIAAKAVALGEALQP 287
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PROMM (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=glyA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.598e-35 Identity = 86/206 (41.75%), Postives = 119/206 (57.77%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMG+D GGHL+HG V+ + +F+ Y V + +D E + + A+ RP+++ICG S+YPR D+ FR IAD+ GA L+ DMAHI+GL+AA SP +CD+VT+TTHK+L + PR G+ L C + DF + + AV P QGGP + IAA A+AL + P Sbjct: 106 ANFAVFLALLQPGDTIMGMDLSHGGHLTHG------SPVNVSGKWFKVVHYGVERDSQQLDMEAVRQLALKERPQLIICGYSAYPRTIDFAAFRSIADEVGAYLLADMAHIAGLVAAGVHPSPIAHCDVVTTTTHKTL-------------RGPR-GGLIL-----CRDADFGRKFDKAVFPGSQGGPLEHVIAAKAVALGEALQP 286
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PROM1 (Serine hydroxymethyltransferase OS=Prochlorococcus marinus (strain NATL1A) GN=glyA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.598e-35 Identity = 81/206 (39.32%), Postives = 127/206 (61.65%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMG+D GGHL+HG V+ + +F++ Y+V+ +T +D + + +KA++ +PK++ICG S+YPR+ D+ FR IAD+ A L+ D+AHI+GL+A+ SP YCD+VT+TTHK+L + PR G+ L+ + + ++++ AV P QGGP + IAA A+A ++ + P Sbjct: 93 ANFAVFLSLLKPGDTIMGMDLSHGGHLTHG------SPVNVSGKWFKTCHYEVDKKTEMLDMDAIRKKAIENQPKLIICGFSAYPRKIDFKAFRSIADEVNAYLLADIAHIAGLVASGLHPSPIPYCDVVTTTTHKTL-------------RGPR-GGLILSKDE-----EIGKKLDKAVFPGTQGGPLEHVIAAKAVAFQEASAP 273
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_HELPG (Serine hydroxymethyltransferase OS=Helicobacter pylori (strain G27) GN=glyA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.598e-35 Identity = 86/206 (41.75%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN AVY LL P D+I+G+D GGHL+HG KVS ++SF Y VN GYIDYE+ + A +P+I++CG S+YPRE D+ +FR+IAD+ GA+L+ D+AH++GL+ E A PF +C +V+STTHK+L + PR GI L + + + +I+ A+ P QGGP + IAA A+ K+ P Sbjct: 98 ANNAVYHALLKPYDKILGMDLSCGGHLTHG------AKVSLTGKHYQSFSYGVNLD-GYIDYEEALKIAQSVKPEIIVCGFSAYPREIDFKKFREIADEVGALLLGDIAHVAGLVVTNEHAHPFPHCHVVSSTTHKTL-------------RGPR-GGIILTNDE-----EIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKP 277 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |