CX309079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CAMC5 (Serine hydroxymethyltransferase OS=Campylobacter curvus (strain 525.92) GN=glyA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.598e-35 Identity = 84/206 (40.78%), Postives = 124/206 (60.19%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY LL PGD+I+G+D GGHL+HG KVS++ +ESF Y V G I+YE++ + A +PK+++CG S+Y RE ++ +FR IAD+ GA+L D+AHI+GL+ A E +PF +CD+V+STTHK+L + PR I N N ++ ++IN ++ P +QGGP + IAA A+ K +P Sbjct: 96 ANQGVYGALLNPGDKILGMDLSHGGHLTHG------AKVSSSGKIYESFFYGVELD-GRINYERILDIAKIVKPKMIVCGASAYTREIEFDKFRAIADEVGALLFADVAHIAGLVVAGEHQNPFPHCDVVSSTTHKTL-------------RGPRGGIIMTN------NEEYAKKINASIFPGIQGGPLVHVIAAKAVGFKHNLSP 275
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA2_PSEF5 (Serine hydroxymethyltransferase 2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=glyA2 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.598e-35 Identity = 82/206 (39.81%), Postives = 123/206 (59.71%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY LL GD I+G+ GGHL+HG KVS++ + + Y ++ +TG IDY+++E A++++PK+++ G S+Y + D+ RFRQIADK GA+L DMAH++GL+AA +P Y D+VT+TTHK+L + PR G+ L +N + E+++N AV P QGGP + IAA A+ K+ P Sbjct: 101 ANSEVYLALLQAGDTILGMSLAHGGHLTHG------AKVSSSGKLYNAVQYGIDTRTGLIDYDEVERLAVEHKPKMIVAGFSAYSKTLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTL-------------RGPR-GGLIL----AKANEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_THEPX (Serine hydroxymethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35 Identity = 82/205 (40.00%), Postives = 116/205 (56.59%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN A Y L+ PGD ++G+D GGHL+HG KV+ + + Y V TGYIDY+++E A ++PK+++ G S+YPR D+ RFR+IADK GA LM DMAHI+GL+AA +P Y D+VT+TTHK+L + PR I ++ + I+ A+ P QGGP + IAA A+ K+ T Sbjct: 99 ANMAAYFALIKPGDTVLGMDLAHGGHLTHG------SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPRIIDFKRFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTL-------------RGPRGGAI-------LCKEEYAKAIDKALFPGTQGGPLMHIIAAKAVCFKEALT 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_THEP3 (Serine hydroxymethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35 Identity = 82/205 (40.00%), Postives = 116/205 (56.59%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 AN A Y L+ PGD ++G+D GGHL+HG KV+ + + Y V TGYIDY+++E A ++PK+++ G S+YPR D+ RFR+IADK GA LM DMAHI+GL+AA +P Y D+VT+TTHK+L + PR I ++ + I+ A+ P QGGP + IAA A+ K+ T Sbjct: 99 ANMAAYFALIKPGDTVLGMDLAHGGHLTHG------SKVNFSGQIYNFVSYGVREDTGYIDYDEVERVAKKHKPKLIVAGASAYPRIIDFKRFREIADKVGAYLMVDMAHIAGLVAAGLHPNPVPYADVVTTTTHKTL-------------RGPRGGAI-------LCKEEYAKAIDKALFPGTQGGPLMHIIAAKAVCFKEALT 277
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_PEDPA (Serine hydroxymethyltransferase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35 Identity = 83/206 (40.29%), Postives = 120/206 (58.25%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A Y + PGD+I+G+D +GGHL+HG KVS + F++S Y V+PQT +DY+++ A+ +P+I++ G S+Y R D+ +FR+IAD+ GA LM DMAHI+GL+AA SP D+VT+TTHK+L + PR G S + +++NFAV P QGGP + IAA A+A + P Sbjct: 96 ANAAAYAAFIKPGDKILGMDLNAGGHLTHG------AKVSFSGTFYQSVSYGVDPQTEKLDYDEIRRIALKEQPQIIVAGASAYSRFIDWNKFREIADEVGAYLMVDMAHIAGLVAAGLHPSPVGIADVVTTTTHKTL-------------RGPR-------GGMILSQEKYAKQLNFAVFPQNQGGPLEHVIAAKAVAFGEALQP 275
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_EHRCJ (Serine hydroxymethyltransferase OS=Ehrlichia canis (strain Jake) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35 Identity = 84/209 (40.19%), Postives = 121/209 (57.89%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASI---FFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN V+ LL PGD ++GL GGHL+HG SA SI +F + Y+V+ TG +D +++E+ ++++P +LI G S+YPR D+ RFR+IADK GA L+ D+AH +GLIAA E SPF+Y +VTSTTHK+L + PR I N+ D ++I ++ P +QGGP + IAA A+A + P Sbjct: 103 ANQGVFAALLKPGDTVVGLSLDCGGHLTHG---------SAPSISGKWFNAVQYQVDRNTGLLDMDEIEKLVLEHKPTLLIAGSSAYPRTIDFKRFREIADKVGAYLLADIAHYAGLIAAGEFPSPFEYAHVVTSTTHKTL-------------RGPRGAVIMTNY------EDIHKKIQSSIFPGMQGGPLMHVIAAKAVAFGEALKP 283
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_DESAP (Serine hydroxymethyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35 Identity = 88/206 (42.72%), Postives = 119/206 (57.77%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN A Y L PGD IMG+ GGHL+HG K++ + +F PY V +TG IDY+++ A ++RPK+++ G S+YPRE D+ R R IAD GA+LM DMAHI+GLIAA SP Y D+VT+TTHK+L + PR G+ L C ++ I+ AV P +QGGP + IAA A+AL + P Sbjct: 100 ANMAAYFAFLEPGDTIMGMRLAHGGHLTHG------AKINFSGRYFRYVPYGVEEETGRIDYDRMHAIAREHRPKLIVGGASAYPRELDFARMRAIADDVGALLMIDMAHIAGLIAAGLHMSPVPYADVVTTTTHKTL-------------RGPR-GGMIL-----CPE-EYAAAIDKAVFPGIQGGPLMHVIAAKAVALGEAQRP 279
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CYAA5 (Serine hydroxymethyltransferase OS=Cyanothece sp. (strain ATCC 51142) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35 Identity = 85/206 (41.26%), Postives = 118/206 (57.28%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFAV+ LL PGD IMG+D GGHL+HG V+ + +F+ Y V+P T +DY+ + E A +PK+LICG S+YPR ++ +FR IAD+ GA LM D+AHI+GL+A+ +P YCD+VT+TTHK+L + PR I N N + ++ + AV P QGGP IAA A+A + P Sbjct: 102 ANFAVFLALLNPGDTIMGMDLSHGGHLTHG------SPVNVSGKWFKVSHYGVSPDTERLDYDSILELAKKEKPKLLICGYSAYPRIIEFDKFRAIADEVGAYLMADIAHIAGLVASGHHPNPLPYCDVVTTTTHKTL-------------RGPRGGLIMTN------NPELGKQFDKAVFPGTQGGPLEQVIAAKAVAFGEALKP 282
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_CAMC1 (Serine hydroxymethyltransferase OS=Campylobacter concisus (strain 13826) GN=glyA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35 Identity = 83/206 (40.29%), Postives = 124/206 (60.19%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY LL PGD+I+G+D GGHL+HG KVS++ +ESF Y V G I+Y+++ + A +PK+++CG S+Y RE ++ +FR+IAD GA+L D+AHI+GL+ A E +PF +CD+V+STTHK+L + PR I N N ++ ++IN ++ P +QGGP + IAA A+ K +P Sbjct: 96 ANQGVYGALLNPGDKILGMDLSHGGHLTHG------AKVSSSGKMYESFFYGVELD-GRINYDRVMDIAKIVKPKMIVCGASAYTREIEFKKFREIADAVGAILFADVAHIAGLVVAGEHQNPFPHCDVVSSTTHKTL-------------RGPRGGIIMTN------NEEYAKKINSSIFPGIQGGPLVHVIAAKAVGFKHNLSP 275
BLAST of CX309079 vs. ExPASy Swiss-Prot
Match: GLYA_RHIEC (Serine hydroxymethyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glyA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.125e-34 Identity = 84/205 (40.98%), Postives = 117/205 (57.07%), Query Frame = 2 Query: 5 NFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 N AV+ LL PGD MGLD SGGHL+HG V+ + +F Y V +D +++ KA +++PK++I GG++Y R WD+ RFR+IAD GA LM DMAHI+GL+A + SPF +C + T+TTHKSL + PR G+ L + + D ++ N AV P LQGGP + IAA A+A + P Sbjct: 108 NQAVFLALLQPGDTFMGLDLNSGGHLTHG------SPVNMSGKWFNVVSYGVREGDNLLDMDEVARKAEEHKPKVIIAGGTAYSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSL-------------RGPR-GGVILTNEE-----DLAKKFNSAVFPGLQGGPLMHIIAAKAVAFGEALQP 287 The following BLAST results are available for this feature:
BLAST of CX309079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309079 ID=CX309079; Name=CX309079; organism=Citrus clementina; type=EST; length=620bpback to top |