CX309092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309092 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.341e-19 Identity = 48/106 (45.28%), Postives = 67/106 (63.21%), Query Frame = -1 Query: 1 LKLVPGNSAGTVTAYYLKSPGSTW----DEIDFEFLENLSGDPYTLHTNVFTNGKGDR--EQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIRE-FKNLESNG 297 +KL +AG V A+Y S G + DE+D EFL NL G P+ TN++ NG +R E+++ LWFDP+ +FH YS+LW P +I+F+VD PIRE + E NG Sbjct: 89 IKLPGAYTAGIVVAFYT-SNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNG 193
BLAST of CX309092 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.790e-18 Identity = 44/106 (41.51%), Postives = 64/106 (60.38%), Query Frame = -1 Query: 16 FGKIDMQLKLVPGNSAGTVTAYYLKSPGS---TWDEIDFEFLENLSGDPYTLHTNVFTNG--KGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKN 318 +G +LKL G ++G V A+YL + + + DEID E L D +T+ TNV+ NG + RE++F+ WFDPT FH Y+++WN VF VD P+R+F N Sbjct: 83 YGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPN 188
BLAST of CX309092 vs. ExPASy Swiss-Prot
Match: GUB_PAEPO (Beta-glucanase OS=Paenibacillus polymyxa GN=gluB PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.634e-11 Identity = 34/90 (37.78%), Postives = 50/90 (55.56%), Query Frame = -1 Query: 40 QLKLVPGNSAGTVTAYYL---KSPGSTWDEIDFEFLENLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDG 300 ++ + P + G V++++ S G+ WDEID EFL D + N +TNG G E+ +L FD + FHTY+ W P I +YVDG Sbjct: 100 EVSMKPAKNTGIVSSFFTYTGPSHGTQWDEIDIEFLGK---DTTKVQFNYYTNGVGGHEKIINLGFDASTSFHTYAFDWQPGYIKWYVDG 186
BLAST of CX309092 vs. ExPASy Swiss-Prot
Match: GUB_ORPSP (Beta-glucanase OS=Orpinomyces sp. (strain PC-2) GN=licA PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.358e-11 Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = -1 Query: 31 QLKLVPGNSAGTVTAYYL---KSPGSTWDEIDFEFLENLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPI 300 Q+ + P + G V++++ S G+ WDEID EFL D + N +TNG+G E +L FD + FHTY W I +YVDG+ + Sbjct: 105 QVNMKPIKNPGVVSSFFTYTGPSDGTKWDEIDIEFL---GYDTTKVQFNYYTNGQGHHEHIHYLGFDASQGFHTYGFFWARNSITWYVDGTAV 194 The following BLAST results are available for this feature:
BLAST of CX309092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309092 ID=CX309092; Name=CX309092; organism=Citrus clementina; type=EST; length=318bpback to top |