DY258489

Overview
NameDY258489
Unique NameDY258489
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1250
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258489 vs. ExPASy Swiss-Prot
Match: CDK7_XENLA (Cell division protein kinase 7 OS=Xenopus laevis GN=cdk7 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.078e-11
Identity = 65/256 (25.39%), Postives = 110/256 (42.97%), Query Frame = 2
Query:  359 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN---------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQTSWLIHSPTXLSFVILGAQKFWVRAKLIYRTYALDITELQN*FLVQQNILPPLDFWVRW------LWS----LPNLLQGRPYFPGKMELNN*LKFIRVLGTPTREKIPCHES--QFIRFLKFP 1063
            +G G F  V++A+   T   VAIKK+    R +          RE++L++ + HPN+I L   F   ++     ++LV +++   +  ++K  S +   +   ++K Y     +GL Y+H +  + HRD+KP  + L+     L     G  K +     IY    +           +    P L F  R       +W+    L  LL   P+ PG  +L+   +    LGTPT E+ P   S   ++ F  FP
Sbjct:   24 LGEGQFATVYKARDKNTDRIVAIKKIKLGHRAEANDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN-----ISLVFDFMETDLEVIIKDTSLV---LTPAHIKSYMLMTLQGLEYLHHL-WILHRDLKPN-NLLLDENGVLKLADFGLAKSFGSPNRIYTHQVV----------TRWYRSPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPGMSSLPDYVAFKSFP 259          
BLAST of DY258489 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.078e-11
Identity = 63/251 (25.10%), Postives = 113/251 (45.02%), Query Frame = 2
Query:  341 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQTSWLIHSPTXLSFVILGAQKFWVRAKLIYRTYALDITELQN*FLVQQNILPPLDF-WVRWLWS----LPNLLQGRPYFPGKMELNN*LKFIRVLGTPTRE------KIPCHESQF 1042
            Y  ++ +G G++G+V +A        VA+KK+ Q+R          RE+ ++  + HPNV+ L   +      ++ FL LV E+  E +Y+    + S + ++P+   +   YQI +GLA+ H    + HRD+KPQ   +  + T    + LG         +  R Y  ++  L   +   + +L    +     +WS       L+     F G+ +++   K    LGTPT +      K+P + S F
Sbjct:    4 YEKKQQLGEGTYGVVCKAWDTVCNRYVALKKIKQEREDDGIPVTSVREIAVLLELKHPNVVDLYDIYL-----EDKFLYLVFEFCDEDLYQ----FMSRSSKIPINETRSIVYQILQGLAFCH-YHQILHRDMKPQNILINKNGT----IKLGEFGLARLTTINDRKYTSEVVTLW--YRAPEILLGATQYGGAIDIWSTAAIFGELINKEELFKGRCKIDQLFKIFSQLGTPTEDIWNGVTKLPFYLSTF 238          
BLAST of DY258489 vs. ExPASy Swiss-Prot
Match: Y823_ENCCU (Probable cell division protein kinase ECU08_0230 OS=Encephalitozoon cuniculi GN=ECU08_0230 PE=3 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 9.662e-11
Identity = 37/135 (27.41%), Postives = 69/135 (51.11%), Query Frame = 2
Query:  341 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQ 730
            Y+   ++G+G++G V++A   ET E VA+K++  + +        RE+ +++ + H N+ISL     +     +  L +V  ++       LK Y  MN    ++ +     Q+  G+ Y+H +  V HRD+KPQ
Sbjct:    4 YILGALIGSGTYGEVYEAIDTETKEKVALKRIRLNEKEGMPGTALREISILKKLSHRNIISLVSIIHT-----DALLTMVFPFIDYE----LKKYIGMNTGKNIMEL---VNQLICGVHYLHRM-NVVHRDLKPQ 125          

HSP 2 Score: 35.8094 bits (81), Expect = 9.662e-11
Identity = 24/76 (31.58%), Postives = 41/76 (53.95%), Query Frame = 1
Query:  760 VKLCDFGSAKVLG-QGEANISYICSRYYRAPELIFGATEYTTSIGFLGPLVVVLAEPASGPPLFSGENGVEQLIKI 984
            +K+ DFG ++ L  +     S + + +YR+PEL+ G+T Y   +  +  L  ++ E  +  PLF GE+   QL  I
Sbjct:  135 LKIADFGLSRSLEIRVPPYSSEVVTLWYRSPELLMGSTSYRFYVD-IWSLGCIIYEMITLEPLFPGESKENQLTLI 209          
The following BLAST results are available for this feature:
BLAST of DY258489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
CDK7_XENLA9.078e-1125.39Cell division protein kinase 7 OS=Xenopus laevis G... [more]
CDK2_ENTHI9.078e-1125.10Cell division protein kinase 2 homolog OS=Entamoeb... [more]
Y823_ENCCU9.662e-1127.41Probable cell division protein kinase ECU08_0230 O... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI2AA12FM1 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258489 ID=DY258489; Name=DY258489; organism=Citrus clementina; type=EST; length=1250bp
GTAAAGCAAAGCGAATAAGAAAGAAAAGAGGGGAGAGAGAGGGAGAGAGA
GAGTGAGTGTATGTGTATTGAATTGAGAGTTTGAAGCTGTAGCAGCTGTA
ACCCACATGGCTTCAATGCCCTTGGGGCCTCAGCCTCAGCCACCGCCGCC
ACCACAAGCACAAGCCCCACCATCGCAGCAACCGCACTTCGACAATGACC
TGCTGAAACGACACCGTCCGGATATGGACTCCGACAAGGAAATGTCAGCT
GCAGTTATTCAGGGGAATGATGCTGTCACTGGCCACATCATTTCTACCAC
AATTGGAGGCAAAAATGGCGAACCCAAGCAGACGATCAGTTACATGGCAG
AGCGTGTTGTTGGTACTGGATCATTCGGTATCGTTTTTCAGGCAAAATGC
TTGGAAACTGGAGAGACAGTGGCTATAAAAAAGGTCTTGCAAGACAGGCG
GTATAAAAATCGTGAACTGCAGTTAATGCGTTTGATGGATCACCCGAATG
TGATTTCCCTTAAGCATTGTTTCTTCTCCACAACAAGTAAAGATGAGCTT
TTTTTGAATTTGGTTATGGAATATGTTCCTGAGACTATGTACCGGGTGCT
GAAGCATTACAGCAGTATGAACCAGAGGATGCCCCTCATCTATGTAAAAC
TGTATACATATCAAATCTTTAGGGGCTTGGCATATATTCATACAGTTCCT
GGGGTCTGCCATAGGGATGTGAAGCCTCAAACCTCTTGGTTGATCCACTC
ACCCACCANGTTAAGCTTTGTGATTTTGGGAGCGCAAAAGTTCTGGGTCA
GGGCGAAGCTAATATATCGTACATATGCTCTCGATATTACCGAGCTCCAG
AACTGATTTTTGGTGCAACAGAATATACTACCTCCATTGGATTTTTGGGT
CCGCTGGTTGTGGTCCTTGCCGAACCTGCTTCAGGGCCGCCCTTATTTTC
CGGGGAAAATGGAGTTGAACAACTAATTAAAATTTATTAGGGTTCTGGGA
ACCCCTACCCGGGAAAAAATTCCATGCCATGAATCCCAATTTATCCGATT
TTTAAAATTCCCCCCAAATTAAGGGCCCCTCCCTTGGGCCCCAGGGTTTT
TCCCCCAACCGCAAAGGGCCCCCGGAAAAAACAATTTACCCCTTTGGTCT
CAAGAGGCCCTTTCTCCTAAAATTTTCCCCCCCCAACCTCCCTCCCCCCG
CGTGTACCGCGCGCGCCCTTGTGGGGGGGGGCGGTGGGTTGGTCCCCCTC
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