DY259735

Overview
NameDY259735
Unique NameDY259735
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1030
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9399 contig Ccv1_Contig9399:124..1153. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.405e-46
Identity = 79/171 (46.20%), Postives = 107/171 (62.57%), Query Frame = 1
Query:   25 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAE 537
            K  GWAARD SG LSP+ ++ RETG EDV ++++ CGICHTDL   KN+ G S +PMVPGHE+ GEV E                      C  C  C  DLE YCPK I +Y+ +  +G  T GG++   V +++++V+ P+ M ++ AAPLLCAG+TVYSPL +FGL +
Sbjct:    9 KTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQ 179          

HSP 2 Score: 32.7278 bits (73), Expect = 1.405e-46
Identity = 16/41 (39.02%), Postives = 25/41 (60.98%), Query Frame = 3
Query:  591 QFAKAFGAKVTVISTSPSQKTEVLEHLGPDSFLKTRDPEQL 713
            + AKA G  VTVIS+S  ++ E L+ LG D ++   D  ++
Sbjct:  198 KIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKM 238          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.170e-45
Identity = 73/166 (43.98%), Postives = 106/166 (63.86%), Query Frame = 1
Query:   34 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 531
            G AA+D SG L+P+ ++ R TG +DV +K+ YCG+CH+DL  IKN+ G S +PMVPGHE+ GEV E                      C SC +C +++E YC K I +Y+ + TDG IT GG+++  V  ++++V+ P+ +  +  APLLCAG+TVYSPL +FGL
Sbjct:   13 GLAAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGL 178          

HSP 2 Score: 39.2762 bits (90), Expect = 1.170e-45
Identity = 21/42 (50.00%), Postives = 27/42 (64.29%), Query Frame = 3
Query:  597 AKAFGAKVTVISTSPSQKTEVLEHLGPDSFLKTRDPEQLQGA 722
            AKA G  VTVIS+S  +K E LE LG D++L + D   +Q A
Sbjct:  201 AKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEA 242          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.589e-45
Identity = 77/168 (45.83%), Postives = 102/168 (60.71%), Query Frame = 1
Query:   34 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAE 537
            GWAARD SG LSP+ +S R TG ED+ +KVL CGICH+D+  IKN+ G S +PMVPGHE+ GEV E                      C SC  C +D E YC K I  Y+ + TDG  T GG++  +V  +R++V+ PD +  +  A ++CAG+TVYSPL  FGL +
Sbjct:   12 GWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQ 178          

HSP 2 Score: 43.5134 bits (101), Expect = 2.589e-45
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 3
Query:  591 QFAKAFGAKVTVISTSPSQKTEVLEHLGPDSFLKTRDPEQLQGA 722
            + AKA G  VTVIS+S  ++TE LEHLG D++L + D   ++ A
Sbjct:  197 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEA 240          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.776e-44
Identity = 82/166 (49.40%), Postives = 106/166 (63.86%), Query Frame = 1
Query:   34 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 531
            GWAARD++GHLSP+ ++ R TG EDV LKVLYCGICHTDL   KN  G S +PMVPGHE+ GEV E                      C  C  C  ++E YC K I +Y+ + TDG  T GG++  MV +++++V+ P  +  + AAPLLCAG+TVYSPLK+FGL
Sbjct:   13 GWAARDATGHLSPYTYNLRRTGAEDVVLKVLYCGICHTDLHQTKNHLGASKYPMVPGHEVVGEVVEVGPEVSKYSVGDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGKPTQGGFAGSMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHFGL 178          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.064e-43
Identity = 80/166 (48.19%), Postives = 107/166 (64.46%), Query Frame = 1
Query:   34 GWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 531
            GWAARD+SGHL+P+ ++ R+TG EDV +KVLYCGICHTD+   KN  G S +PMVPGHE+ GEV E                      C  C  C  ++E YC K I +Y+ + TDG  T GG++  MV +++++V+ P  +  + AAPLLCAG+TVYSPLK+FGL
Sbjct:   12 GWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGL 177          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.746e-40
Identity = 70/160 (43.75%), Postives = 96/160 (60.00%), Query Frame = 1
Query:   37 WAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPL 516
            WAARD SG LSP   +RR    +DV L + +CG+C+ D+   +N+ G S +P+VPGHEIAG VT+                     +C  CE C    E  C K + T++ I+ DG++T GGYS H+V +ERY  + P   PL++AAPLLCAGITVY+P+
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPM 173          

HSP 2 Score: 41.2022 bits (95), Expect = 1.746e-40
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 3
Query:  591 QFAKAFGAKVTVISTSPSQKTEVLEHLGPDSFLKTRDPEQLQ 716
            +F KAFG  VTV STS S+K E L  LG ++F+ + D +Q++
Sbjct:  199 KFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMK 240          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.518e-38
Identity = 65/150 (43.33%), Postives = 90/150 (60.00%), Query Frame = 1
Query:   85 RRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPK-MILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 531
            RR     DV + + + GICH+D+ +  +EWG  +FPMVPGHEIAG VT                      +C  CE C N  E +C K ++ TY+S++ DG  TYGGYS  +V  +R++VR PD + +D A+PLLCAGIT YSPLK++ +
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNV 175          

HSP 2 Score: 42.743 bits (99), Expect = 4.518e-38
Identity = 35/104 (33.65%), Postives = 49/104 (47.12%), Query Frame = 3
Query:  591 QFAKAFGAKVTVISTSPSQKTEVLEHLGPDSFLKTRDPEQLQGAMATWMGLL-TXXXXXXXXXXXXSIKFPGQLGSGCAPNTPPTYLEFP-NMGKKKGSGTPPG 896
            QFA A GA+VTV+S S ++K E LE LG + +  T DP         +  +L T             ++  G L S  AP  P TY  F   MG++  +G+  G
Sbjct:  195 QFAHAMGAEVTVLSRSMNKKEEALE-LGANHYFATSDPATFTALAGRFDVILNTVSANLDVDAYLSMLRIDGTLVSVGAPAKPDTYSVFSLIMGRRSIAGSLVG 297          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.011e-34
Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = 1
Query:   37 WAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYF 525
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHW 170          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.011e-34
Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = 1
Query:   37 WAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYC-PKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYF 525
            +AA  ++  L+    +RR+ G  DV + + + GICH+D+  +K EWG   +P+VPGHEIAG VT                      +C  C SC   +E YC P    TY+SI  DG  T GGYS+ +V +E Y++R PD +PLD AAPLLCAGIT+YSPL+++
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHW 170          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.349e-30
Identity = 69/170 (40.59%), Postives = 94/170 (55.29%), Query Frame = 1
Query:   22 VKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGT-ITYGGYSDHMVANERYIVRFPDSM-PLDAAAPLLCAGITVYSPLKYF 525
            +KA G  A  +   L P   +RRE G  DV++++ YCG+CH+DL  +++EW  +++P VPGHEI G V                       +C  CE C + LENYC  M  TY+S   D    T GGYS  +V +ERY++R       L A APLLCAGIT YSPL+++
Sbjct:    3 IKAVG--AYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHW 170          
The following BLAST results are available for this feature:
BLAST of DY259735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
CADH5_ARATH1.405e-4646.20Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH_MEDSA1.170e-4543.98Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH_EUCBO2.589e-4545.83Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH_LOLPR4.776e-4449.40Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH2_ORYSJ1.064e-4348.19Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH1_ARATH1.746e-4043.75Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHA_BACSU4.518e-3843.33Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
ADHC_MYCTU2.011e-3442.68NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO2.011e-3442.68NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
YAHK_ECOLI1.349e-3040.59Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259735 ID=DY259735; Name=DY259735; organism=Citrus clementina; type=EST; length=1030bp
TCACGAGAAGAAGAACATCCAGTAAAGGCCTTTGGGTGGGCAGCCCGAGA
CAGCTCCGGCCATCTCTCCCCATTCAAATTCTCCAGAAGGGAAACGGGTG
ATGAGGATGTGAGGCTGAAGGTATTGTATTGTGGGATCTGCCATACTGAT
CTCTCCAACATCAAGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCC
TGGGCATGAAATTGCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAA
AGGTTAAAGTGGGAGATAAAGTTGGAGTTGGATGCATGGTCGGTGCATGC
CACAGCTGCGAGAGCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAAT
GATACTCACCTACAGTTCCATTAACACTGACGGAACAATCACATACGGAG
GCTACTCTGATCACATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCT
GATAGCATGCCCCTTGATGCTGCTGCCCCCCTGCTTTGCGCCGGGATTAC
CGTGTACAGTCCATTGAAATACTTTGGACTAGCAGAACAAGGAAAGCATG
TAGGCATCGTTGGCCTTGGCGGGCTTGGTCATGTCGCTGTCAATTTGCCA
AGGCTTTTGGGGCCAAAGTGACAGTAATTAGCACCTCTCCAAGCCAGAAG
ACTGAAGTTCTTGAACATCTTGGCCCTGATTCATTTTTGAAAACCCGTGA
CCCTGAACAATTGCAGGGTGCTATGGCCACTTGGATGGGATTATTGACAC
CGGGTCCCCCTGGGCCCCCATTTTGCCCTGGTCCGTCCATTAAATTCCCA
GGGCAGCTTGGTTCTGGTTGTGCCCCGAACACCCCCCCAACCTACCTTGA
ATTCCCTAATATGGGGAAAAAAAAGGGTTCGGGGACCCCCCCGGGGGAAA
AAAAAAACCCAAAAAAAATTAATTTCCCCAAAAACCAAAAAACCCCCAAA
CTTGGGGTTTTTTCAAGGTTTTTTCTAAACCCCAAGGGAAAGGTGGCCCC
GGGGGAAGGTCCCGACCATTTTTCCCTTAA
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