DY259735

Overview
NameDY259735
Unique NameDY259735
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1030
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9399 contig Ccv1_Contig9399:124..1153. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.597e-23
Identity = 57/170 (33.53%), Postives = 87/170 (51.18%), Query Frame = 1
Query:   16 HPVKAFGWAARDSSGHLSP--FKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX-ACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPL 516
            +P K  G A +      +P   K+  +   D D+ +K+  CG+C +D+      WG    P+V GHEI G+V +                      +C  C+ C ND E YC K + TYS    DG ++ GGY++++  +E ++V  P+++P   AAPLLC G+TVYSPL
Sbjct:    3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL 172          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.952e-21
Identity = 52/162 (32.10%), Postives = 90/162 (55.56%), Query Frame = 1
Query:   37 WAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXA--CHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPL 516
            +AA+++ G L  +++   E   +DV ++V YCGICH+DLS I NEWGFS +P+V GHE+ G V                       A  C  C++C +  +  C +      ++ T   +  GG+++ + A+ ++++  P+++ +++A PLLC GITV+ PL
Sbjct:    7 YAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQ-----GAVPT--IMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPL 161          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.419e-21
Identity = 50/172 (29.07%), Postives = 82/172 (47.67%), Query Frame = 1
Query:   28 AFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTY--------SSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 519
            A G+   D    +    F R++  + +V +++ Y GICH+D   I  EW    FP++PGHE+ G V +                     +C  C+ C + +E +C                 I   G ITYGGYS+ ++  + ++ +FP ++ ++  APL+CAG T YSPL+
Sbjct:   71 ALGFGVTDVGKPVELLVFDRKKPTNNEVSIEIYYTGICHSDWHFIVGEWKAD-FPLIPGHELIGRVIDIGPNVDKYSIGDIVCVSPVIDSCGHCKMCTHHIEQHCMNGATEIYNQKTRLPGDIKPSGPITYGGYSNIVIIKQHFVYKFPKNLDIERCAPLMCAGATTYSPLR 241          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.446e-18
Identity = 52/154 (33.77%), Postives = 74/154 (48.05%), Query Frame = 1
Query:   61 HLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX-ACHSCESCANDLENYCPK-MILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPL 516
            H     F  +  GD DV +++  CGIC +D       WG      + GHEI G V +                      AC  CE C +D E YC    +LT  +   DG I+ GG++ H+  +E + ++ P+++P   AAPLLC GITV+SPL
Sbjct:   20 HPKLVSFDPKPFGDHDVDVEIEACGICGSDFHIAVGNWGPVPENQILGHEIIGRVVKVGSKCHTGVKIGDRVGVGAQALACFECERCKSDNEQYCTNDHVLTMWTPYKDGYISQGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITVFSPL 173          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 8.488e-17
Identity = 55/168 (32.74%), Postives = 77/168 (45.83%), Query Frame = 1
Query:   37 WA--ARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 531
            WA  A    G L   +    + G +++ +KV Y G+CHTDL  +K +W   +  P+V GHE AG V                       +C +CE C    E  CP   L  S    DGT     +  + +    +  + P ++PLDA AP+LCAGITVY  LK  G+
Sbjct:    8 WAQVAEQKGGPLIYKQIPVPKPGPDEILVKVRYSGVCHTDLHALKGDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNASL--SGYTVDGT-----FQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKESGV 168          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.448e-16
Identity = 47/144 (32.64%), Postives = 71/144 (49.31%), Query Frame = 1
Query:   91 ETGDEDVRLKVLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLK 519
            E G ++V + + Y G+CHTDL  ++ +W   +  P++ GHE AG V +                     +C +CE C    E  CP + L  S    DGT     +  + +AN  +    P+S+PL+ AAP++CAGIT Y  LK
Sbjct:   30 EPGQDEVLVNIKYTGVCHTDLHALQGDWPLPAKMPLIGGHEGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQL--SGYTVDGT-----FQHYCIANATHATIIPESVPLEVAAPIMCAGITCYRALK 166          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.213e-16
Identity = 52/147 (35.37%), Postives = 70/147 (47.62%), Query Frame = 1
Query:   97 GDEDVRLKVLYCGICHTDLSNIKNEWGF-SLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXX--ACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 528
            G +++ +K+ Y G+CHTDL  +K +W   S  P++ GHE AG V                         +C SCE C    E  CP   L  S    DGT     +  + +       + PD++PLDAAAP+LCAGITVY  LK  G
Sbjct:   30 GPDEILVKMRYSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASL--SGYTVDGT-----FQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGLKESG 169          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.226e-15
Identity = 46/149 (30.87%), Postives = 67/149 (44.97%), Query Frame = 1
Query:   85 RRETGDEDVRLKVLYCGICHTDLSNIKNEWGFS-LFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 528
            R +  + +V +K+  CG+CHTDL     +W      P++PGHE  G V E                     AC  CE C    E  CP  +    S++       GGY+++  A   Y+ + PD++     AP+LCAG+T Y  LK  G
Sbjct:   20 RPKLEEGEVLVKIEACGVCHTDLHAAHGDWPIKPKLPLIPGHEGVGIVVEVAKGVKSIKVGDRVGIPWLYSACGECEYCLTGQETLCPHQLNGGYSVD-------GGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSG 161          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 4.658e-15
Identity = 42/142 (29.58%), Postives = 66/142 (46.48%), Query Frame = 1
Query:  106 DVRLKVLYCGICHTDLSNIKNEWGFS-LFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFG 528
            +V +++  CG+CHTDL     +W      P++PGHE  G + E                     AC  C+ C +  E  C +      S++       GGY+++  A   Y+V+ PD++  + AAP+ CAG+T Y  LK  G
Sbjct:   27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCERQQNAGYSVD-------GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG 161          
BLAST of DY259735 vs. ExPASy Swiss-Prot
Match: ADH1_NEUCR (Alcohol dehydrogenase 1 OS=Neurospora crassa GN=adh-1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.945e-15
Identity = 44/149 (29.53%), Postives = 70/149 (46.98%), Query Frame = 1
Query:   88 RETGDEDVRLKVLYCGICHTDLSNIKNEWGFSL-FPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 531
            ++ G ++V + V Y G+CHTDL  +K +W  +   P+V GHE AG V                       +C +C  C    E  CP  +L+  +++       G +  + +A   ++ + P    L+  AP+LCAGITVY  LK  G+
Sbjct:   30 QKPGPDEVLINVKYSGVCHTDLHAMKGDWPLATKMPLVGGHEGAGVVVAKGELVTEVEVGDHAGIKWLNGSCLACSFCMQADEPLCPHALLSGYTVD-------GSFQQYAIAKAAHVAKIPKGCDLETTAPVLCAGITVYKGLKESGV 171          
The following BLAST results are available for this feature:
BLAST of DY259735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
ADH6_YEAST1.597e-2333.53NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]
YJGB_ECOLI1.952e-2132.10Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
YL498_MIMIV7.419e-2129.07Probable zinc-type alcohol dehydrogenase-like prot... [more]
ADH7_YEAST3.446e-1833.77NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]
ADH1_ASPFN8.488e-1732.74Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH_SCHPO1.448e-1632.64Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]
ADH3_EMENI4.213e-1635.37Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADH2_BACST1.226e-1530.87Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_BACST4.658e-1529.58Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_NEUCR7.945e-1529.53Alcohol dehydrogenase 1 OS=Neurospora crassa GN=ad... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YA13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259735 ID=DY259735; Name=DY259735; organism=Citrus clementina; type=EST; length=1030bp
TCACGAGAAGAAGAACATCCAGTAAAGGCCTTTGGGTGGGCAGCCCGAGA
CAGCTCCGGCCATCTCTCCCCATTCAAATTCTCCAGAAGGGAAACGGGTG
ATGAGGATGTGAGGCTGAAGGTATTGTATTGTGGGATCTGCCATACTGAT
CTCTCCAACATCAAGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCC
TGGGCATGAAATTGCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAA
AGGTTAAAGTGGGAGATAAAGTTGGAGTTGGATGCATGGTCGGTGCATGC
CACAGCTGCGAGAGCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAAT
GATACTCACCTACAGTTCCATTAACACTGACGGAACAATCACATACGGAG
GCTACTCTGATCACATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCT
GATAGCATGCCCCTTGATGCTGCTGCCCCCCTGCTTTGCGCCGGGATTAC
CGTGTACAGTCCATTGAAATACTTTGGACTAGCAGAACAAGGAAAGCATG
TAGGCATCGTTGGCCTTGGCGGGCTTGGTCATGTCGCTGTCAATTTGCCA
AGGCTTTTGGGGCCAAAGTGACAGTAATTAGCACCTCTCCAAGCCAGAAG
ACTGAAGTTCTTGAACATCTTGGCCCTGATTCATTTTTGAAAACCCGTGA
CCCTGAACAATTGCAGGGTGCTATGGCCACTTGGATGGGATTATTGACAC
CGGGTCCCCCTGGGCCCCCATTTTGCCCTGGTCCGTCCATTAAATTCCCA
GGGCAGCTTGGTTCTGGTTGTGCCCCGAACACCCCCCCAACCTACCTTGA
ATTCCCTAATATGGGGAAAAAAAAGGGTTCGGGGACCCCCCCGGGGGAAA
AAAAAAACCCAAAAAAAATTAATTTCCCCAAAAACCAAAAAACCCCCAAA
CTTGGGGTTTTTTCAAGGTTTTTTCTAAACCCCAAGGGAAAGGTGGCCCC
GGGGGAAGGTCCCGACCATTTTTCCCTTAA
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