Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG044_77606884_7760688marker_locus41.33 cM
Citrus-P.trifoliata-consensus-2018.LG044_75373514_7537351marker_locus42.05 cM
Citrus-P.trifoliata-consensus-2018.LG044_90607504_9060750marker_locus42.65 cM
Citrus-P.trifoliata-consensus-2018.LG044_95055374_9505537marker_locus43.48 cM
Citrus-P.trifoliata-consensus-2018.LG044_125731834_12573183marker_locus45.3 cM
Citrus-P.trifoliata-consensus-2018.LG044_139103254_13910325marker_locus47.63 cM
Citrus-P.trifoliata-consensus-2018.LG044_143858374_14385837marker_locus48.85 cM
Citrus-P.trifoliata-consensus-2018.LG044_155534184_15553418marker_locus51.47 cM
Citrus-P.trifoliata-consensus-2018.LG044_152818174_15281817marker_locus52.1 cM
Citrus-P.trifoliata-consensus-2018.LG044_147611684_14761168marker_locus52.56 cM
Citrus-P.trifoliata-consensus-2018.LG044_160741414_16074141marker_locus53.27 cM
Citrus-P.trifoliata-consensus-2018.LG044_150767444_15076744marker_locus53.72 cM
Citrus-P.trifoliata-consensus-2018.LG044_162556714_16255671marker_locus55.03 cM
Citrus-P.trifoliata-consensus-2018.LG044_172359054_17235905marker_locus55.84 cM
Citrus-P.trifoliata-consensus-2018.LG044_171127464_17112746marker_locus56.23 cM
Citrus-P.trifoliata-consensus-2018.LG044_177207704_17720770marker_locus57.21 cM
Citrus-P.trifoliata-consensus-2018.LG044_180121974_18012197marker_locus59.6 cM
Citrus-P.trifoliata-consensus-2018.LG044_182049604_18204960marker_locus60.4 cM
Citrus-P.trifoliata-consensus-2018.LG044_184670634_18467063marker_locus61.16 cM
Citrus-P.trifoliata-consensus-2018.LG044_191592304_19159230marker_locus69.68 cM
Citrus-P.trifoliata-consensus-2018.LG044_192816024_19281602marker_locus71.16 cM
Citrus-P.trifoliata-consensus-2018.LG044_195550514_19555051marker_locus73.09 cM
Citrus-P.trifoliata-consensus-2018.LG044_197869984_19786998marker_locus73.8 cM
Citrus-P.trifoliata-consensus-2018.LG044_204101204_20410120marker_locus75.14 cM
Citrus-P.trifoliata-consensus-2018.LG044_201112404_20111240marker_locus75.76 cM
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Map QTL
This map contains 14 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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