DY304900

Overview
NameDY304900
Unique NameDY304900
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1206
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY304900 vs. ExPASy Swiss-Prot
Match: Y4141_ARATH (Uncharacterized protein At4g14100 OS=Arabidopsis thaliana GN=At4g14100 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.927e-22
Identity = 61/155 (39.35%), Postives = 81/155 (52.26%), Query Frame = 1 
Query:  112 P*PDDRPPQFHSLLLMNSNTPLYVIDFGYNWGNXXXXXXXXXXXXXXXMNPEWDLRISFFFTLHFSIYCIPGHLVVEILHSNGLACADLLG*ILEDGFPCTGWELADFIFHYEDAHNKWLALCVI*SERQAHVITYQVRAVLEDAQSRAPVCCYD 576
            P P   P QFH+L+ MN +  L +ID  Y+W N                + EW+   SFF+TL  S  C  G L V IL  N L  A  LG     GF C  WE  DFI++YED   K     +  + R+AH++TY+V AVLED + +APV C++
Sbjct:   28 PVPTPWPHQFHALMFMNYSGDLSMIDLWYDWTNGRNFNIIQEQLGGITYDLEWNNGTSFFYTLDESKSCRSGQLEVGILRPNWLDGAKYLGQQNVSGFLCNVWEKVDFIWYYEDVETKRPVQWIFYTGREAHIMTYEVGAVLEDEKWQAPVYCFN 182
The following BLAST results are available for this feature:
BLAST of DY304900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4141_ARATH4.927e-2239.35Uncharacterized protein At4g14100 OS=Arabidopsis t... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAH1AE10RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304900 ID=DY304900; Name=DY304900; organism=Citrus clementina; type=EST; length=1206bp
GACTCGTGCCGAATTTTGACAGAGGCACGCTAGACGCACTGTCATGTCGC
TTGTTCCTTGTACGATCCATTTTTCCTCCCCATGTTTAGGCACTGATGAC
TTCACTATTATCCTTAGCCAGACGATCGGCCTCCCCAGTTCCACTCTTTA
CTTCTGATGAATTCCAACACCCCTCTATATGTGATTGATTTCGGGTACAA
CTGGGGGAACAGATGACTTGAAAGACTCATTCGCATTCGGCTGTAATCTC
TGCTCATGAACCCTGAATGGGACTTGAGAATTTCCTTCTTCTTCACGTTG
CATTTCAGTATATACTGTATACCTGGTCACCTAGTGGTCGAAATTCTGCA
CTCTAATGGTCTGGCTTGCGCTGATTTACTTGGCTGAATCCTCGAGGATG
GCTTCCCTTGCACTGGCTGGGAGTTGGCTGACTTTATATTCCACTATGAG
GATGCCCACAACAAATGGCTTGCCCTTTGTGTTATTTAATCTGAGCGGCA
GGCTCATGTGATAACATATCAAGTTCGAGCAGTGCTTGAAGATGCGCAGT
CTCGCGCCCCTGTTTGCTGCTACGATAACACCAATGAACTATAATACCTC
TTCACTGCTTCTCATGGACCATGGCTAAATGGGTGCCTTGAATGTTGCAT
AAAGTTCTGATTCAGAATCAATGAGATTGGTGATTCTAATATCATATGGC
CAGCTTCCGTTATATGTTTTATCAATACTGCAACTATATCGCTAGTCTTC
TGCTTGTTGTCATACTTGACAAAGATAATCTCTATGGAAGTACGGGGACT
AAGAAAACTGCATCTTCAATCTGCCTGGACTGCATACTGCATCTTTTAAA
AAACTTCTGCCAAGACAAGAATTATGGACTCAAGGGGCGGCCGGGCCCCA
TTTTTACCCTAAAGGGGCCCAATAACATTAAATGGGCCGCGGTAATACAC
CCCAAAATTGGAAAAAGCACGGAAATAACCCCAAAGGTCGCGGTGAAAAG
AAGCCCCCATTCCCAAAGGTGCCTATCAAAAAAAGGGCCCCCCCCCAATC
CCTTTTCCCCCGTTTTCCGCCCCCCGTAGGGGGAAATGGTAAGGGGAAAA
GGGGAAGAATTTCGGAAATTTTTTTTTTTTATATTTTTTCTTTCAAAACC
CCTTTTTTTTTTTCTAATAAACAAAAAACACAATTCCCAAAAAAGATCCC
CCCCTT
back to top