FC868491

Overview
NameFC868491
Unique NameFC868491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9337 contig Ccv1_Contig9337:1..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK4_ARATH (Mitogen-activated protein kinase 4 OS=Arabidopsis thaliana GN=MPK4 PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 4.069e-62
Identity = 103/119 (86.55%), Postives = 114/119 (95.80%), Query Frame = 1 
Query:  280 THGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            THGG YVQYNVYGNLFEVS KYVPP+RPIGRGAYGIVCAA NSET EEVAIKKIGNAFDNIIDA+RTLREIKLL+HM+HENVIA+KDII+PP+++ FNDVYIVYELMDTDLHQI+RS+Q
Sbjct:   21 THGGSYVQYNVYGNLFEVSRKYVPPLRPIGRGAYGIVCAATNSETGEEVAIKKIGNAFDNIIDAKRTLREIKLLKHMDHENVIAVKDIIKPPQRENFNDVYIVYELMDTDLHQIIRSNQ 139

HSP 2 Score: 38.5058 bits (88), Expect = 4.069e-62
Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DHC++FLYQLLRG +YVH
Sbjct:  144 DHCRFFLYQLLRGLKYVH 161
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.176e-61
Identity = 103/119 (86.55%), Postives = 111/119 (93.28%), Query Frame = 1 
Query:  280 THGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            THGG+YV YNVYGN FEVSSKY PPIRPIGRGAYGIVCAAVNSE  EEVAIKKIGNAFDN IDA+RTLREIKLLRHM+HEN+IAIKDIIRPP++D FNDVYIV ELMDTDLHQI+RS+Q
Sbjct:   21 THGGRYVLYNVYGNFFEVSSKYAPPIRPIGRGAYGIVCAAVNSENGEEVAIKKIGNAFDNHIDAKRTLREIKLLRHMDHENIIAIKDIIRPPRRDNFNDVYIVSELMDTDLHQIIRSNQ 139

HSP 2 Score: 41.5874 bits (96), Expect = 1.176e-61
Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DHCQYFLYQLLRG +YVH
Sbjct:  144 DHCQYFLYQLLRGLKYVH 161
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK2_ORYSJ (Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.430e-61
Identity = 99/120 (82.50%), Postives = 115/120 (95.83%), Query Frame = 1 
Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            LTHGG+YVQYNVYGNLFEVSSKYVPPIRP+GRGA GI+CA VN++TR+EVAIKKIGNAFDN IDA+RTLREIKLLRHM+H+NVI+IKDIIRPP+++ FNDVYIVYELMDTDLH ++RS+Q
Sbjct:   38 LTHGGRYVQYNVYGNLFEVSSKYVPPIRPVGRGACGIICAVVNAQTRQEVAIKKIGNAFDNQIDAKRTLREIKLLRHMDHDNVISIKDIIRPPRRENFNDVYIVYELMDTDLHHLLRSNQ 157

HSP 2 Score: 40.4318 bits (93), Expect = 4.430e-61
Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DHCQYFLYQ+LRG +YVH
Sbjct:  162 DHCQYFLYQVLRGLKYVH 179
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK5_ARATH (Mitogen-activated protein kinase 5 OS=Arabidopsis thaliana GN=MPK5 PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 4.827e-60
Identity = 99/120 (82.50%), Postives = 111/120 (92.50%), Query Frame = 1 
Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            L HGG+Y QYNVYGNLFEVS+KYVPPIRPIGRGAYG VCAAV+SET EE+AIKKIG AFDN +DA+RTLREIKLLRH+EHENV+ IKDIIRPPKK+ F DVYIV+ELMDTDLHQI+RS+Q
Sbjct:   20 LVHGGRYFQYNVYGNLFEVSNKYVPPIRPIGRGAYGFVCAAVDSETHEEIAIKKIGKAFDNKVDAKRTLREIKLLRHLEHENVVVIKDIIRPPKKEDFVDVYIVFELMDTDLHQIIRSNQ 139

HSP 2 Score: 40.4318 bits (93), Expect = 4.827e-60
Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DHCQYFLYQ+LRG +Y+H
Sbjct:  144 DHCQYFLYQILRGLKYIH 161
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MMK2_MEDSA (Mitogen-activated protein kinase homolog MMK2 OS=Medicago sativa GN=MMK2 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 6.294e-60
Identity = 100/119 (84.03%), Postives = 113/119 (94.96%), Query Frame = 1 
Query:  280 THGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            THGG+Y+QYN+YGNLFEVS KYVPPIR +GRGAYGIVCAAVN+ETREEVAIKKIGNAFDN IDA+RTLREIKLLRHM+HENV++IKDIIRPP+K+ FN VYIV ELMDTDLHQI+RS+Q
Sbjct:   15 THGGRYLQYNIYGNLFEVSRKYVPPIRSVGRGAYGIVCAAVNAETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVMSIKDIIRPPQKENFNHVYIVSELMDTDLHQIIRSNQ 133

HSP 2 Score: 38.891 bits (89), Expect = 6.294e-60
Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DHC+YF+YQLLRG +YVH
Sbjct:  138 DHCRYFVYQLLRGLKYVH 155
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum GN=NTF6 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 5.721e-58
Identity = 93/119 (78.15%), Postives = 108/119 (90.76%), Query Frame = 1 
Query:  280 THGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            TH GKYV+YNV GN FEV+SKY+PPI+P+GRGAYG+VC A NSET+EEVAIKKIGNAF+N IDA+RTLREIKLL HM+HEN+I IKDI+RPP ++ FNDVYIVYELMDTDLHQI+RS Q
Sbjct:   16 THEGKYVEYNVLGNFFEVTSKYIPPIQPVGRGAYGMVCCATNSETKEEVAIKKIGNAFENRIDAKRTLREIKLLSHMDHENIIKIKDIVRPPDREEFNDVYIVYELMDTDLHQIIRSSQ 134

HSP 2 Score: 41.5874 bits (96), Expect = 5.721e-58
Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            DHCQYFLYQLLRG +YVH
Sbjct:  139 DHCQYFLYQLLRGLKYVH 156
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK12_ARATH (Mitogen-activated protein kinase 12 OS=Arabidopsis thaliana GN=MPK12 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 4.775e-57
Identity = 101/119 (84.87%), Postives = 111/119 (93.28%), Query Frame = 1 
Query:  280 THGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            THGG+YVQYNVYG LFEVS KYVPPIRPIGRGA GIVCAAVNS T E+VAIKKIGNAFDNIIDA+RTLREIKLLRHM+HENVI IKDI+RPP++D FNDVYIVYELMDTDL +I+RS+Q
Sbjct:   19 THGGRYVQYNVYGQLFEVSRKYVPPIRPIGRGACGIVCAAVNSVTGEKVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENVITIKDIVRPPQRDIFNDVYIVYELMDTDLQRILRSNQ 137

HSP 2 Score: 31.9574 bits (71), Expect = 4.775e-57
Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            D C++ +YQLLRG +YVH
Sbjct:  142 DQCRFLVYQLLRGLKYVH 159
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 2.343e-56
Identity = 89/120 (74.17%), Postives = 111/120 (92.50%), Query Frame = 1 
Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            L+HGG+++QYN++GN+FEV++KY PPI PIG+GAYGIVC+A+NSET E VAIKKI NAFDN IDA+RTLREIKLLRHM+HEN++AI+DII PP+++ FNDVYI YELMDTDLHQI+RS+Q
Sbjct:   37 LSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQ 156

HSP 2 Score: 38.891 bits (89), Expect = 2.343e-56
Identity = 13/18 (72.22%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +HCQYFLYQ+LRG +Y+H
Sbjct:  161 EHCQYFLYQILRGLKYIH 178
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 3.983e-56
Identity = 89/120 (74.17%), Postives = 113/120 (94.17%), Query Frame = 1 
Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            L+HGG+++QYN++GN+FEV++KY PPI PIG+GAYGIVC+A+NSET E+VAIKKI NAFDN IDA+RTLREIKLLRHM+HEN++AI+DII PP++++FNDVYI YELMDTDLHQI+RS+Q
Sbjct:   44 LSHGGRFIQYNIFGNVFEVTAKYKPPILPIGKGAYGIVCSALNSETGEQVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQRNSFNDVYIAYELMDTDLHQIIRSNQ 163

HSP 2 Score: 38.891 bits (89), Expect = 3.983e-56
Identity = 13/18 (72.22%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +HCQYFLYQ+LRG +Y+H
Sbjct:  168 EHCQYFLYQILRGLKYIH 185
[Close]
BLAST of FC868491 vs. ExPASy Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 6.769e-56
Identity = 89/120 (74.17%), Postives = 110/120 (91.67%), Query Frame = 1 
Query:  277 LTHGGKYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSETREEVAIKKIGNAFDNIIDARRTLREIKLLRHMEHENVIAIKDIIRPPKKDTFNDVYIVYELMDTDLHQIVRSDQ 636
            L+HGG+++QYN++GN+FEV++KY PPI PIG+GAYGIVC+A+NSET E VAIKKI NAFDN IDA+RTLREIKLLRHM+HEN++AI+DII PP ++ FNDVYI YELMDTDLHQI+RS+Q
Sbjct:   40 LSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAMNSETNESVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPLRNAFNDVYIAYELMDTDLHQIIRSNQ 159

HSP 2 Score: 38.891 bits (89), Expect = 6.769e-56
Identity = 13/18 (72.22%), Postives = 17/18 (94.44%), Query Frame = 3 
Query:  648 DHCQYFLYQLLRGFEYVH 701
            +HCQYFLYQ+LRG +Y+H
Sbjct:  164 EHCQYFLYQILRGLKYIH 181
The following BLAST results are available for this feature:
BLAST of FC868491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
MPK4_ARATH4.069e-6286.55Mitogen-activated protein kinase 4 OS=Arabidopsis ... [more]
MPK6_ORYSJ1.176e-6186.55Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]
MPK2_ORYSJ4.430e-6182.50Mitogen-activated protein kinase 2 OS=Oryza sativa... [more]
MPK5_ARATH4.827e-6082.50Mitogen-activated protein kinase 5 OS=Arabidopsis ... [more]
MMK2_MEDSA6.294e-6084.03Mitogen-activated protein kinase homolog MMK2 OS=M... [more]
NTF6_TOBAC5.721e-5878.15Mitogen-activated protein kinase homolog NTF6 OS=N... [more]
MPK12_ARATH4.775e-5784.87Mitogen-activated protein kinase 12 OS=Arabidopsis... [more]
NTF4_TOBAC2.343e-5674.17Mitogen-activated protein kinase homolog NTF4 OS=N... [more]
MPK1_ORYSJ3.983e-5674.17Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]
MPK6_ARATH6.769e-5674.17Mitogen-activated protein kinase 6 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC31001A06EF AbioticL1 Citrus clementina cDNA clone C31001A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868491 ID=FC868491; Name=FC868491; organism=Citrus clementina; type=EST; length=702bp
CTTCCCGGGGACGGATTTTCAAACAAATTTCATTACCAAAGGTGTGGTTA
CGAGGCGCAAAAAGTTGTTGCTGCATTCAAATTTTCACATTCACAACACG
CTCTGGCAAGACCCAAATGCTCAAGCTCAACCAAACCGAGCAAGCTCAAC
TCTGATAAAACAGTAAACGGCCAGAAGCAGAGAAAAAGAGAACCCAGTTC
TGGGTTTTGAGTGAAAATGGCAGCAGCGGCGAAGGATTCGAGTTCAGGTG
GTGCGACTAGCAGTGTCAAAGGGGTGCTCACACATGGGGGTAAATACGTA
CAGTACAATGTTTACGGTAACCTTTTTGAGGTTTCTAGCAAGTATGTCCC
TCCCATTCGACCCATTGGTAGGGGTGCTTATGGCATTGTTTGCGCTGCTG
TAAATTCAGAGACACGCGAGGAGGTTGCCATTAAGAAGATCGGTAATGCA
TTTGACAACATAATAGATGCCAGAAGGACCTTGAGAGAAATTAAGCTTCT
TCGCCACATGGAGCATGAAAATGTCATCGCCATTAAGGATATCATTCGGC
CTCCCAAAAAGGACACCTTTAATGATGTATACATTGTTTATGAATTGATG
GACACTGATCTTCACCAGATAGTTCGCTCTGACCAACACTAACGGATGAT
CATTGTCAGTACTTTTTATATCAGTTGTTACGAGGATTTGAATATGTACA
TT
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