FC872936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC872936 vs. ExPASy Swiss-Prot
Match: RGLG2_ARATH (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.361e-20 Identity = 52/102 (50.98%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 245 LIFGIDFTASNLWAGKFSFENESLHTIVDGDTLNPYQEVIYITGKELVLFDGD-CIRCYGFGDDTTRDEGVFSFQENDSPCQGFEHVLECYRKNVPNVQYFG 547 LI GIDFT SN W G SF +SLH I G + NPY++ I I G+ L FD D I CYGFGD +T D+ VFSF D C GFE VL Y++ VP ++ G Sbjct: 123 LIVGIDFTKSNEWTGARSFNRKSLHFI--GSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFNSEDRFCNGFEEVLSRYKEIVPQLKLAG 222
BLAST of FC872936 vs. ExPASy Swiss-Prot
Match: RGLG1_ARATH (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.185e-19 Identity = 51/102 (50.00%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 245 LIFGIDFTASNLWAGKFSFENESLHTIVDGDTLNPYQEVIYITGKELVLFDGD-CIRCYGFGDDTTRDEGVFSFQENDSPCQGFEHVLECYRKNVPNVQYFG 547 LI GIDFT SN W G SF +SLH + +T NPY++ I I G+ L FD D I CYGFGD +T D+ VFSF C GFE VL YR+ VP ++ G Sbjct: 157 LIVGIDFTKSNEWTGAKSFNRKSLHHL--SNTPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEGRFCNGFEEVLARYREIVPQLKLAG 256
BLAST of FC872936 vs. ExPASy Swiss-Prot
Match: CPNA2_CAEEL (Copine domain-containing protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 2.955e-17 Identity = 48/105 (45.71%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 245 LIFGIDFTASNLWAGKFSFENESLHTIVDGDTLNPYQEVIYITGKELVLFDGD-CIRCYGFGDDTTRDEGVFSFQEN---DSPCQGFEHVLECYRKNVPNVQYFG 547 LIFGID+T SN + G+ +F+ LHTI D +NPYQ+VI I GK L FD D I YGFGD+ D G+F+ E + C GFE VL Y + P ++ G Sbjct: 7319 LIFGIDYTKSNFYQGERTFDKRPLHTI-DPAEMNPYQQVIQIVGKTLSSFDADGQIPAYGFGDEEFTDHGIFNIAERYDLEKDCNGFEEVLRVYNEVTPTIEMSG 7422 The following BLAST results are available for this feature:
BLAST of FC872936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872936 ID=FC872936; Name=FC872936; organism=Citrus clementina; type=EST; length=868bpback to top |