FC872965

Overview
NameFC872965
Unique NameFC872965
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length752
Libraries
Library NameType
AbsDevcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig204 contig Ccv1_Contig204:414..1165. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC872965 vs. ExPASy Swiss-Prot
Match: UCP7_SCHPO (UBA domain-containing protein 7 OS=Schizosaccharomyces pombe GN=ucp7 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.614e-18
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 3
Query:  135 QAQRDQAERHRIAETLDVEIKRWAAGKEGNIRALLATMQYVLWPESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            +A++   ER R+ E +   + +W  GKE N+RALLA++  +LWPE  WQ VSL++L+    VK  Y KA   +HPDK+ Q+  +++ + IAE  F +L  AW  F  +
Sbjct:  588 KAEQLDEERSRLREPVQQIVNKWKEGKESNLRALLASLDTILWPECRWQKVSLSELVLPKKVKIAYMKAVSRVHPDKLPQQ-TSVEHQLIAESAFSILNHAWELFKQQ 694          
BLAST of FC872965 vs. ExPASy Swiss-Prot
Match: GAK_MOUSE (Cyclin G-associated kinase OS=Mus musculus GN=Gak PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.679e-15
Identity = 47/117 (40.17%), Postives = 69/117 (58.97%), Query Frame = 3
Query:  111 AEKNERDLQAQRDQAERHRIAETLDVEIKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            ++K      A+  + E  R  + L +++  W  GKE NIRALL+T+  VLW  ES W PVS+ DL+T   VKK YR+A L +HPDK    G   +Q   A+ +F  L +AW++F ++
Sbjct: 1187 SDKKGPKTMAEMRKQELARDTDPLKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVKKQYRRAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEFENQ 1299          
BLAST of FC872965 vs. ExPASy Swiss-Prot
Match: AUXI_HUMAN (Putative tyrosine-protein phosphatase auxilin OS=Homo sapiens GN=DNAJC6 PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.679e-15
Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 3
Query:  126 RDLQAQRDQAE--RHRIAETLDVE---IKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            +D +  R  AE  +  +A+ +D E   I  W  GKE NIRALL+TM  VLW  E+ W+PV + DL+T   VKK YRKA L +HPDK    G   +Q   A+ +F  L +AW++F ++
Sbjct:  795 KDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEFENQ 907          
BLAST of FC872965 vs. ExPASy Swiss-Prot
Match: AUXI_BOVIN (Putative tyrosine-protein phosphatase auxilin OS=Bos taurus GN=DNAJC6 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.679e-15
Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 3
Query:  126 RDLQAQRDQAE--RHRIAETLDVE---IKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            +D +  R  AE  +  +A+ +D E   I  W  GKE NIRALL+TM  VLW  E+ W+PV + DL+T   VKK YRKA L +HPDK    G   +Q   A+ +F  L +AW++F ++
Sbjct:  792 KDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEFENQ 904          
BLAST of FC872965 vs. ExPASy Swiss-Prot
Match: GAK_RAT (Cyclin G-associated kinase OS=Rattus norvegicus GN=Gak PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.740e-15
Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = 3
Query:  111 AEKNERDLQAQRDQAERHRIAETLDVEIKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            ++K      A+  + E  R  +   +++  W  GKE NIRALL+T+  VLW  ES W PVS+ DL+T   VKK YR+A L +HPDK    G   +Q   A+ +F  L +AW++F ++
Sbjct: 1187 SDKKGPKTMAEMRKQELARDTDPFKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVKKQYRRAVLVVHPDKA--TGQPYEQS--AKMIFMELNDAWSEFENQ 1299          
BLAST of FC872965 vs. ExPASy Swiss-Prot
Match: AUXI_MOUSE (Putative tyrosine-protein phosphatase auxilin OS=Mus musculus GN=Dnajc6 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.740e-15
Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = 3
Query:  126 RDLQAQRDQAE--RHRIAETLDVE---IKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            +D +  R  AE  +  +A+ +D E   I  W  GKE NIRALL+TM  VLW  E+ W+PV + DL+T   VKK YR+A L +HPDK    G   +Q   A+ +F  L +AW++F ++
Sbjct:  820 KDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKA--TGQPYEQ--YAKMIFMELNDAWSEFENQ 932          
BLAST of FC872965 vs. ExPASy Swiss-Prot
Match: GAK_HUMAN (Cyclin G-associated kinase OS=Homo sapiens GN=GAK PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.088e-14
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 3
Query:  102 KALAEKNERDLQAQRDQAERHRIAETLDVEIKRWAAGKEGNIRALLATMQYVLWP-ESGWQPVSLTDLITAAAVKKCYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKFNSE 458
            K +AE  ++DL    D          L +++  W  GKE NIRALL+T+  VLW  ES W PV + DL+    VKK YR+A L +HPD    K A    +  A+ +F  L +AW++F ++
Sbjct: 1199 KTIAEMRKQDLAKDTDP---------LKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVGMADLVAPEQVKKHYRRAVLAVHPD----KAAGQPYEQHAKMIFMELNDAWSEFENQ 1305          
The following BLAST results are available for this feature:
BLAST of FC872965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
UCP7_SCHPO3.614e-1839.81UBA domain-containing protein 7 OS=Schizosaccharom... [more]
GAK_MOUSE1.679e-1540.17Cyclin G-associated kinase OS=Mus musculus GN=Gak ... [more]
AUXI_HUMAN1.679e-1542.74Putative tyrosine-protein phosphatase auxilin OS=H... [more]
AUXI_BOVIN1.679e-1542.74Putative tyrosine-protein phosphatase auxilin OS=B... [more]
GAK_RAT3.740e-1539.32Cyclin G-associated kinase OS=Rattus norvegicus GN... [more]
AUXI_MOUSE3.740e-1541.88Putative tyrosine-protein phosphatase auxilin OS=M... [more]
GAK_HUMAN1.088e-1438.33Cyclin G-associated kinase OS=Homo sapiens GN=GAK ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAI3DH08FM1 AbsDev Citrus clementina cDNA clone KN0AAI3DH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC872965 ID=FC872965; Name=FC872965; organism=Citrus clementina; type=EST; length=752bp
CTGGATCATCACTTGGAGAGTTCCAAGATGTTGAAGGGGAAACTGAAGAA
AGACGAAGAGCCAGGTTAGAACGCCACCGAAGGACGCAGGAGCGTGCGGC
AAAGGCTCTGGCTGAGAAGAATGAACGTGACCTTCAAGCCCAAAGGGATC
AAGCTGAGAGACATAGGATTGCAGAAACTCTTGATGTTGAAATTAAGCGC
TGGGCTGCTGGAAAAGAAGGGAATATACGCGCTCTCTTAGCTACAATGCA
ATATGTGCTCTGGCCTGAAAGTGGTTGGCAACCTGTTTCTTTGACTGATT
TGATTACTGCTGCTGCGGTTAAAAAGTGTTATAGAAAGGCAACTTTATGC
ATCCATCCTGATAAAGTGCAACAAAAAGGAGCCAATCTCCAACAGAAGTA
TATTGCTGAGAAGGTGTTTGATTTGCTTAAGGAAGCTTGGAACAAGTTCA
ATTCGGAGGAGCTCTTCTGAGTTCAAGTAACAATTATTTTACTCAAACTT
CTTGATTCTTGGGAGTGGAACCATATTGACTGTCTCAGCTGATACATTCT
TCAATCTGCTGTCACATTCTGCTTCAATTCACGTCATATTATGTCTATCA
GCTGATAAGAGGGAGGCTCGGGGGCCCTTTCGCATATGCCAAGATGCCTA
TGTCCAAGTGTCTGCGCGCTATTCTTTTGCTGTAAACAAATGTTCCTGCA
TATGCATCAGGAGGTGTAATCTTTTGTTCGTGTAGAGTAATATTTGGTGC
TC
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