FC875268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875268 vs. ExPASy Swiss-Prot
Match: CA123_XENLA (UPF0587 protein C1orf123 homolog OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.489e-25 Identity = 60/163 (36.81%), Postives = 95/163 (58.28%), Query Frame = 1 Query: 52 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQGGKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVESL-AGTQYEDIDLSGGDYAEYDEKGVCPVMISNLRFKF 534 MV L A LENLT L+P G +F +F KLKCG CGE+S K ++L +++P +GG+G+ +++Q+CK C RE ++ ++ P E +++ F ++ F+CRG EP+DF G+ E GT + +I+L D+ +YDEK V I + +F Sbjct: 1 MVKFALQFKASLENLTQLRPHG----EDFRWFLKLKCGNCGEVSDKWQYITLMDSVPLKGGRGSASMVQRCKLCSRENSIDILAASLHPYNAEDSET--FKTIVEFECRGLEPIDFQPQAGFAAEGAETGTPFHEINLQEKDWTDYDEKAKESVGIYEVEHRF 157
BLAST of FC875268 vs. ExPASy Swiss-Prot
Match: CA123_HUMAN (UPF0587 protein C1orf123 OS=Homo sapiens GN=C1orf123 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24 Identity = 59/158 (37.34%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 67 LMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQGGKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVESL-AGTQYEDIDLSGGDYAEYDEKGVCPVMISNLRFKF 534 L + A LEN+TNL+P G +F ++ K+KCG CGE+S K + L +++ +GG+G+ +++QKCK C RE ++ ++ KP E + F ++ F+CRG EPVDF G+ E + +GT + DI+L D+ +YDEK V I + +F Sbjct: 6 LQLKATLENITNLRPVG----EDFRWYLKMKCGNCGEISDKWQYIRLMDSVALKGGRGSASMVQKCKLCARENSIEILSSTIKPYNAE--DNENFKTIVEFECRGLEPVDFQPQAGFAAEGVESGTAFSDINLQEKDWTDYDEKAQESVGIYEVTHQF 157
BLAST of FC875268 vs. ExPASy Swiss-Prot
Match: CA123_BOVIN (UPF0587 protein C1orf123 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.567e-23 Identity = 58/158 (36.71%), Postives = 95/158 (60.13%), Query Frame = 1 Query: 67 LMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQGGKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVESL-AGTQYEDIDLSGGDYAEYDEKGVCPVMISNLRFKF 534 L + A LEN+TNL+P G +F ++ K+KCG CGE+S+K + L +++ +GG+G+ +++QKCK C RE ++ ++ K + A + F ++ F+CRG EPVDF G+ E + +GT + DI+L D+ +YDEK V I + +F Sbjct: 6 LQLKATLENVTNLRPVG----EDFRWYLKMKCGNCGEISEKWQYIRLMDSVALKGGRGSASMVQKCKLCSRENSIEILSSTIK--SYNAEDNEKFKTIVEFECRGLEPVDFQPQAGFAAEGVESGTVFSDINLQEKDWTDYDEKAQESVGIYEVTHQF 157
BLAST of FC875268 vs. ExPASy Swiss-Prot
Match: CA123_RAT (UPF0587 protein C1orf123 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.084e-23 Identity = 55/144 (38.19%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 67 LMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQGGKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVESL-AGTQYEDIDLSGGDYAEYDEK 492 L + A LEN+TNL+P G +F ++ K+KCG CGE+S+K + L +++ +GG+G+ +++QKCK C RE ++ ++ K + A + F ++ F+CRG EPVDF G+ E + +GT + DI+L D+ +YDEK Sbjct: 6 LQLKATLENVTNLRPVG----EDFRWYLKMKCGNCGEISEKWQYIRLMDSVALKGGRGSASMVQKCKLCARENSIEILSSTIK--SYNAEDNEKFKTIVEFECRGLEPVDFQPQAGFAAEGVESGTVFSDINLQEKDWTDYDEK 143
BLAST of FC875268 vs. ExPASy Swiss-Prot
Match: CA123_MOUSE (UPF0587 protein C1orf123 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.946e-23 Identity = 57/158 (36.08%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 67 LMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQGGKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVESL-AGTQYEDIDLSGGDYAEYDEKGVCPVMISNLRFKF 534 L + A LEN+TNL+P G +F ++ K+KCG CGE+S+K + L +++ +GG+G+ +++QKCK C RE ++ ++ K E + F ++ F+CRG EPVDF G+ + + +GT + DI+L D+ +YDEK V I + +F Sbjct: 6 LQLKATLENVTNLRPVG----EDFRWYLKMKCGNCGEISEKWQYIRLMDSVALKGGRGSASMVQKCKLCARENSIDILSSTIKAYNAEDNEK--FKTIVEFECRGLEPVDFQPQAGFAADGVESGTVFSDINLQEKDWTDYDEKAQESVGIFEVTHQF 157
BLAST of FC875268 vs. ExPASy Swiss-Prot
Match: U587_DROME (UPF0587 protein CG4646 OS=Drosophila melanogaster GN=CG4646 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.312e-22 Identity = 65/168 (38.69%), Postives = 90/168 (53.57%), Query Frame = 1 Query: 52 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQGGKGTT-NLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVESLA-GTQYEDIDLSGGDYAEYDEKGVCPVMISNLRFKFEVVK 546 MV L ISA LEN+ L+ P++S+F KLKC CGE S K ++ +E + N KCK C RE ++ ++ P T A SG F +++F+CRG EPV+F VGW+V S G Q+E++DLS D+ EYD+K V I KF +K Sbjct: 1 MVRVGLQISATLENVDKLETS----HPDYSFFLKLKCSNCGEQSDKWHDITESERVQQDSRNAAGFNFFMKCKMCSRENSIDIVDKSNAPYT--ADDSGAFKTIVVFECRGAEPVEFSPRVGWRVSSAENGQQFEEVDLSEDDWVEYDQKNNNSVGIYEFASKFIKLK 162
BLAST of FC875268 vs. ExPASy Swiss-Prot
Match: U587_NEMVE (UPF0587 protein v1g245604 OS=Nematostella vectensis GN=v1g245604 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21 Identity = 56/162 (34.57%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 52 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFFKLKC-GCGELSQKETCVSLAETLPTQGGKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVESLAGTQYEDIDLSGGDYAEYDEKGVCPVMISNLRFKF 534 MV L + A+LEN+TNL+ +G +F ++ LKC CGE++++ + L E+ P +GG+G + + KCK C RE +V ++ P A+ +G F ++ FDCRG EP DF GW E + ++DL+ D+++YDEK V + + +F Sbjct: 1 MVRIGLQLKANLENVTNLKAEG----EDFRWYLMLKCMNCGEVTKQWVYMCLMESQPVKGGRGYAHFVSKCKLCHRENSVDIMKDSIHPYL--ASHNGKFHTIVSFDCRGVEPTDFSPRTGWTAEGENTSTPFEVDLTEKDWSDYDEKAQNAVGVYGVTSQF 156
BLAST of FC875268 vs. ExPASy Swiss-Prot
Match: U587_DROPS (UPF0587 protein GA18326 OS=Drosophila pseudoobscura pseudoobscura GN=GA18326 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.691e-20 Identity = 65/169 (38.46%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 52 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFFKLKCG-CGELSQKETCVSLAETLPTQGGKGTT--NLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKV-ESLAGTQYEDIDLSGGDYAEYDEKGVCPVMISNLRFKFEVVK 546 MV L ISA LEN+ L+ P++ +F KL C CGE S K ++ +E + Q + T N KCK C RE ++ ++ P T A SG +++FDCRG EPVDF GWKV S G +ED+DLS D+ EYD+K V + KF +K Sbjct: 1 MVRVGLQISATLENIDKLETS----HPDYPFFVKLTCSNCGEQSDKWHDITESERVQ-QDTRNTAGFNFFMKCKMCSRENSIDIVEKSNVPYT--ADDSGKLKTIVIFDCRGLEPVDFSPRSGWKVFSSENGQSFEDVDLSEDDWVEYDQKNNNSVGVYEFVSKFIKLK 162
BLAST of FC875268 vs. ExPASy Swiss-Prot
Match: U587_CAEEL (UPF0587 protein F46B6.12 OS=Caenorhabditis elegans GN=F46B6.12 PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 9.091e-19 Identity = 55/162 (33.95%), Postives = 86/162 (53.09%), Query Frame = 1 Query: 67 LMISADLENLTNLQPQGGCDDPNFSYFFKLKC-GCGELSQKETCVSLAETLPTQGGKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVESL-AGTQYEDIDLSGGDYAEYDEKGVCPVMISNLRFKFEVVK 546 L + L+ +T+L+P D +F + KLKC CGE V L E L G +G NL++KCK CGR T+T++ K E Q+ + + +FDCRG EP DF W +S+ G + +IDLS ++ ++D+K + V IS + +F ++ Sbjct: 6 LELKCQLKGITDLRPD---DTDSFHWHMKLKCTNCGEAPDHWQYVVLNEMLDVPGSRGEANLVEKCKLCGRVNTLTIVEDMFKSYNIE--QNEKWQQIAVFDCRGLEPFDFDPRDEWIAKSVETGNAFHEIDLSEKEWVDFDDKAMEAVEISEMSSQFTTIR 162
BLAST of FC875268 vs. ExPASy Swiss-Prot
Match: U587_DICDI (UPF0587 protein OS=Dictyostelium discoideum GN=DDB_G0270194 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.832e-12 Identity = 48/167 (28.74%), Postives = 81/167 (48.50%), Query Frame = 1 Query: 52 MVNCMLMISADLENLTNLQPQGGCDDPNFSYFF-KLKCG-CGELSQKETCVSLAETLPTQGGKGTTNLIQKCKFCGREGTVTMIPGRGKPLTQEAAQSGGFSPLMLFDCRGYEPVDFVFGVGWKVESLAGTQYEDIDLSGGDYAEYDEKGVCPVMISNLRFKFEVVK 546 MV + + A+LE + N+ P + FF K+KC CGE+ K + L ++ GK NL KCK C RE ++ + + +S + FDCRG E +F W V S +G +Y+D+DL G+++E++E+ + I ++ + +K Sbjct: 1 MVRQSISLKAELEEIQNIFPA------TYKIFFLKIKCSNCGEIPDK--WIGLDKSNIEVIGKSNVNLATKCKGCNRENSIVI---EDTDYSSRTIESEKDFEIARFDCRGVEIEEFDPRDNWIVVSSSGKEYKDVDLEEGEWSEFEERTSTSLTILSIESSIKKIK 156 The following BLAST results are available for this feature:
BLAST of FC875268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875268 ID=FC875268; Name=FC875268; organism=Citrus clementina; type=EST; length=733bpback to top |