FC875287

Overview
NameFC875287
Unique NameFC875287
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12426 contig Ccv1_Contig12426:449..1141. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 369.392 bits (947), Expect = 1.013e-101
Identity = 181/230 (78.70%), Postives = 202/230 (87.83%), Query Frame = 2
Query:    2 LFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPNAP 691
            LFGTRLPAV+G SYTFVP+TISIIL+GRFS+ S +P+++F+R MRA QG+LIVASTLQ++LGFSGLWRNV RF             GFGLYEFGFPGVAKC+EIGLP+L+I+VF+SQYLPHVIK GKN+FDRFAVIF+VVIVWIYAHLLTVGGAYN AAP TQ SCRTDRAG+I AAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAF AV+RYASAT   P
Sbjct:   92 LFGTRLPAVVGASYTFVPTTISIILSGRFSDTS-NPIDRFERIMRATQGALIVASTLQMILGFSGLWRNVVRFLSPISAVPLVGLVGFGLYEFGFPGVAKCIEIGLPELLILVFVSQYLPHVIKSGKNVFDRFAVIFAVVIVWIYAHLLTVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFVAVSRYASATMLPP 320          
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.262e-93
Identity = 168/230 (73.04%), Postives = 190/230 (82.61%), Query Frame = 2
Query:    2 LFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPNAP 691
            +FGTRLPAV+G SYTFVP TISI+L+GRF++ + DPVE+FKR +RA QG+LIVASTLQI+LGFSGLWRNV RF             G+GLYE GFPGVAKC+EIGLP L+I++ ISQY+PHVIK GK++F RFAVIFSV IVW+YA  LT+GGAYN     TQ SCRTDRAGLI AAPWIRVPWPFQWGAP FDAGEAFAMMMASFVALVESTGAF AV+RYASAT   P
Sbjct:   88 VFGTRLPAVIGASYTFVPVTISIMLSGRFNDVA-DPVERFKRIIRATQGALIVASTLQIILGFSGLWRNVVRFLSPLSAAPLVGLVGYGLYELGFPGVAKCIEIGLPGLIILILISQYMPHVIKGGKHVFARFAVIFSVAIVWLYAFFLTLGGAYNGVGTDTQRSCRTDRAGLISAAPWIRVPWPFQWGAPLFDAGEAFAMMMASFVALVESTGAFIAVSRYASATMPPP 316          
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 315.079 bits (806), Expect = 2.268e-85
Identity = 151/229 (65.94%), Postives = 182/229 (79.48%), Query Frame = 2
Query:    5 FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPNAP 691
            FGTRLPAV+GGSYT+VP+T+SIILAGR+S+   DP EKFKR MR IQG+LIVAS LQIV+GFSGLWRNV R              GFGLYE GFP +AKC+EIGLP++++++  SQY+PH+I+  + +F RFAVIFSVVIVWIYAHLLTVGGAY +    TQ SCRTDR+GLI  +PWIRVP+PFQWG P+F AGEAFAMM  SFV+L+ESTG +  V+R+ASATP  P
Sbjct:   99 FGTRLPAVIGGSYTYVPTTLSIILAGRYSDIL-DPQEKFKRIMRGIQGALIVASILQIVVGFSGLWRNVVRLLSPLSAVPLVALAGFGLYEHGFPLLAKCIEIGLPEIILLLLFSQYIPHLIRGERQVFHRFAVIFSVVIVWIYAHLLTVGGAYKNTGVNTQTSCRTDRSGLISGSPWIRVPYPFQWGPPTFHAGEAFAMMAVSFVSLIESTGTYIVVSRFASATPPPP 326          
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.332e-77
Identity = 141/232 (60.78%), Postives = 183/232 (78.88%), Query Frame = 2
Query:    5 FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVI--KRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQW-GAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPNAP 691
            FGTRLPAV+G SY++VP+T+SI+LA R+++   DP ++F++ MR IQG+LI+AS L I++GFSGLWRNVTRF             GFGLYE GFP +AKC+EIGLP+++++V  SQY+PH++  +   N F RFAVIFSVVIVW+YA++LT+GGAY++    TQ SCRTDRAG+I A+PWIRVP P QW GAP+F+AG+ FAMM ASFV+LVESTG + AV+RYASATP  P
Sbjct:   97 FGTRLPAVIGASYSYVPTTMSIVLAARYNDIM-DPQKRFEQIMRGIQGALIIASFLHILVGFSGLWRNVTRFLSPLSAVPLVAFSGFGLYEQGFPMLAKCIEIGLPEIILLVIFSQYIPHLMQGETCSNFFHRFAVIFSVVIVWLYAYILTIGGAYSNTEINTQISCRTDRAGIISASPWIRVPHPIQWGGAPTFNAGDIFAMMAASFVSLVESTGTYIAVSRYASATPIPP 327          
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 8.385e-64
Identity = 115/230 (50.00%), Postives = 159/230 (69.13%), Query Frame = 2
Query:    2 LFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPNAP 691
            LFG+RLP VMG SY ++   + I  + RF+ Y   P  +F+ TMRAIQG+LI+AS   +++GF GLWR + RF             G GL  F FP +A+C+EIGLP L+I++ +SQYLPH+ K  ++I ++FAV+F++ IVW YA +LT  GAY+     TQ SCRTDR+GLI A+PW+R+P+P QWG PSF   +AFAMM A++VA+VE+TG+F A +R+ SAT   P
Sbjct:   86 LFGSRLPVVMGASYAYLIPALYITFSYRFTYYL-HPHLRFEETMRAIQGALIIASISHMIMGFFGLWRILVRFLSPLSAAPLVILTGVGLLAFAFPQLARCIEIGLPALIILIILSQYLPHLFKCKRSICEQFAVLFTIAIVWAYAEILTAAGAYDKRPDNTQLSCRTDRSGLISASPWVRIPYPLQWGRPSFHGSDAFAMMAATYVAIVETTGSFIAASRFGSATHIPP 314          
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.430e-63
Identity = 123/230 (53.48%), Postives = 155/230 (67.39%), Query Frame = 2
Query:    2 LFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPNAP 691
            LFGTRLP V+GGSY F+   ISII     +    DP  +F  TMRA+QG++IVAS++QI+LGFS +W   +RF             GFGL+  GFP V  CVEIGLP L++ V  SQYL +   R   + +RFA+I +++IVW YAH+LT  GAY     +TQ +CRTD + LI +APWI++P+P QWGAPSFDAG AFAMM A  V+L+ESTGAF A AR ASATP  P
Sbjct:   86 LFGTRLPTVIGGSYAFMVPIISIIHDSSLTRIE-DPQLRFLSTMRAVQGAIIVASSVQIILGFSQMWAICSRFFSPIGMVPVIALTGFGLFNRGFPVVGNCVEIGLPMLILFVIFSQYLKNFQFRQFPVVERFALIIALIIVWAYAHVLTASGAYKHRPHQTQLNCRTDMSNLISSAPWIKIPYPLQWGAPSFDAGHAFAMMAAVLVSLIESTGAFKAAARLASATPPPP 314          
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.430e-63
Identity = 113/225 (50.22%), Postives = 154/225 (68.44%), Query Frame = 2
Query:    5 FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASAT 679
            FGTRLPAVM GSYT++   ++IIL+ R++    DP+E+F  TMR++QG+LI+A   Q V+GF G+WR   RF             G GL+ F FPGV KC+E+GLP LV++V  ++Y  H+  +G  +F R AV+ +VVI+WIYA +LT  GAYN+  P TQ SCR DR+G+I  +PW+R P+PFQWG P F   + FAM+ ASF +L+ESTG   AV+RY+ AT
Sbjct:   88 FGTRLPAVMSGSYTYIYPAVAIILSPRYALLI-DPLERFVFTMRSLQGALIIAGVFQAVVGFFGIWRVFIRFLSPLAAVPFVTLTGLGLFFFAFPGVTKCIEVGLPALVLLVIFAEYASHLFAKGSFVFSRCAVLVTVVIIWIYAEILTAAGAYNERGPVTQFSCRADRSGIIQGSPWVRFPYPFQWGYPIFCFQDCFAMLAASFASLIESTGTLIAVSRYSGAT 311          
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 6.009e-62
Identity = 113/236 (47.88%), Postives = 154/236 (65.25%), Query Frame = 2
Query:    5 FGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIF-------DRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPNAP 691
            FGTRLP +   SY ++    SII + RF+ Y+ DP E+F RTMR+IQG+LI+    Q+++   G+WRN+ RF             G GLY  GFP +A+CVE+GLP L++++F++QYLP  +K  K +        DR+ +I  + +VW++A LLT  G Y+  +  TQ SCRTDR GLI   PWI +P+PFQWG+P+FD  ++FAMM ASFV L ESTG F+A ARY SATP  P
Sbjct:   97 FGTRLPVIAVASYAYIIPITSIIYSTRFTYYT-DPFERFVRTMRSIQGALIITGCFQVLICILGVWRNIVRFLSPLSIAPLATFTGLGLYHIGFPLLARCVEVGLPGLILLIFVTQYLPRFLKMKKGVMILDGSRCDRYGMILCIPLVWLFAQLLTSSGVYDHKSHTTQTSCRTDRTGLITNTPWIYIPYPFQWGSPTFDITDSFAMMAASFVTLFESTGLFYASARYGSATPIPP 331          
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.435e-56
Identity = 111/228 (48.68%), Postives = 146/228 (64.04%), Query Frame = 2
Query:    2 LFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIK-RGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATP 682
            LFGTRLPAV+GGS  +V     II        S D  E+F  TMRAIQG+LIVAS++QI+LG+S +W   +RF             G G+++ GFP +  C+EIGLP L++++ ++QYL HV   +   IF+RF ++  V IVWIYA +LT  GAY      TQ SCRTD+A LI  APW + P+P QWG P+F  G +FAMM A  V++VESTGA+ A +R A ATP
Sbjct:   81 LFGTRLPAVVGGSLAYVVPIAYIINDSSLQKISNDH-ERFIHTMRAIQGALIVASSIQIILGYSQVWGLFSRFFSPLGMAPVVGLVGLGMFQRGFPQLGNCIEIGLPMLLLVIGLTQYLKHVRPFKDVPIFERFPILICVTIVWIYAVILTASGAYRGKPSLTQHSCRTDKANLISTAPWFKFPYPLQWGPPTFSVGHSFAMMSAVLVSMVESTGAYIAASRLAIATP 307          
BLAST of FC875287 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.484e-52
Identity = 100/226 (44.25%), Postives = 139/226 (61.50%), Query Frame = 2
Query:    2 LFGTRLPAVMGGSYTFVPSTISIILAGRFSNYSGDPVEKFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFXXXXXXXXXXXXXGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASAT 679
            L GTRLP VMG S+ +V   +SII       +  +  ++F+ TMR +QGSLI++S + I++G+   W N+ R                GL+  GFP +A CVEIGLP L++++   QYL H   R   I +R+A++  + I+W +A +LTV GAYN+ +  T+ SCRTDRA L+ +APWIR+P+PFQWG P F A   F M  A+ VA  ESTG FFA +R A AT
Sbjct:  110 LIGTRLPTVMGVSFAYVLPVLSIIRDYNNGQFDSEK-QRFRHTMRTVQGSLIISSFVNIIIGYGQAWGNLIRIFSPIIVVPVVSVVSLGLFLRGFPLLANCVEIGLPMLILLIITQQYLKHAFSRISMILERYALLVCLAIIWAFAAILTVSGAYNNVSTATKQSCRTDRAFLMSSAPWIRIPYPFQWGTPIFKASHVFGMFGAAIVASAESTGVFFAASRLAGAT 334          
The following BLAST results are available for this feature:
BLAST of FC875287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
NAT6_ARATH1.013e-10178.70Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH2.262e-9373.04Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH2.268e-8565.94Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT8_ARATH1.332e-7760.78Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT4_ARATH8.385e-6450.00Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT2_ARATH1.430e-6353.48Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
LPE1_MAIZE1.430e-6350.22Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT10_ARATH6.009e-6247.88Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT1_ARATH6.435e-5648.68Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT3_ARATH1.484e-5244.25Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC31402C07EF CTVClemen1 Citrus clementina cDNA clone C31402C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875287 ID=FC875287; Name=FC875287; organism=Citrus clementina; type=EST; length=693bp
ATTGTTTGGGACTCGATTACCTGCAGTTATGGGAGGGTCTTACACTTTTG
TCCCTTCTACAATTTCAATCATCCTTGCTGGTCGATTCAGTAATTATTCT
GGAGATCCTGTTGAGAAATTCAAGAGAACTATGCGGGCAATACAGGGTTC
TCTCATTGTTGCTTCTACTCTTCAGATTGTCCTAGGCTTCAGTGGGCTTT
GGCGTAATGTTACAAGGTTTTTAAGTCCACTCTCAGTGGTTCCTTTGATT
TCCCTAGTTGGTTTTGGGCTGTACGAGTTTGGTTTTCCTGGGGTTGCCAA
ATGTGTGGAGATTGGACTGCCTCAACTCGTCATTATAGTATTTATTTCAC
AGTATCTGCCTCATGTGATAAAACGTGGGAAAAATATCTTTGATCGTTTT
GCTGTCATATTTTCTGTGGTGATTGTGTGGATATATGCTCATCTACTTAC
TGTGGGTGGGGCTTATAATGACGCTGCCCCTAAGACACAAGCAAGCTGCC
GAACTGATCGTGCTGGTCTCATTGATGCTGCTCCCTGGATAAGAGTTCCA
TGGCCCTTCCAATGGGGGGCGCCTTCATTTGATGCTGGTGAAGCTTTTGC
CATGATGATGGCCTCCTTTGTTGCTCTTGTTGAGTCAACTGGTGCTTTTT
TTGCGGTAGCACGGTATGCAAGTGCAACTCCNAATGCACCTTC
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