FC875305
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875305 vs. ExPASy Swiss-Prot
Match: HTR7A_DICDI (HEAT repeat-containing protein 7A homolog OS=Dictyostelium discoideum GN=heatr7a PE=4 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.969e-26 Identity = 75/237 (31.65%), Postives = 129/237 (54.43%), Query Frame = 3 Query: 15 LLEQMVEALCRHVSDESPTVRGLCLRGLVQIPSIHIHQ---YATQVLSVILALLDDLDESVQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQQEAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGIFN--SHCFNSDH-RSDYETFVRDLTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANAIYFSSSIL 704 L+++++ L + D P V+ + L+GL I S + Q YA V+ + +DD DE++ + + L I + + + V PIL+N+ R+R N +R +F FG+L FG GS + F EQIH+ LP LI+H+ DD SV+ +C+ TL Q++ M FN S F D+ + +YE F+ D ++ + ++P R++ ++ + I+ F++ W ++ NA F IL Sbjct: 1366 LIQRLINTLLNSLVD--PLVKLISLKGLSNIVSAGVEQTNRYAPTVIDALSTSIDDQDETMAMECMLGLSKIFEVADEGRVAPILVNICNRIRPAFEKPNDSIRAASFQLFGSLWRFGSGSACDPFYEQIHSSLPSLIMHLNDDVQSVKNSCKKTLFQLSTLMRSQDAMDYFNNKSKGFVGDNDQPNYEEFLLDFSKLLIINYPERVNYFVMTVIEFFKSTWVNLRGNAATFIGFIL 1600
BLAST of FC875305 vs. ExPASy Swiss-Prot
Match: HRT7A_BOVIN (HEAT repeat-containing protein 7A OS=Bos taurus GN=HEATR7A PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.192e-15 Identity = 60/229 (26.20%), Postives = 110/229 (48.03%), Query Frame = 3 Query: 15 LLEQMVEALCRHVSDESPTVRGLCLRGLVQIP---SIHIHQYATQVLSVILALLDDLDESVQLTAVSCLLTILKSSSK-DA--VEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQQEAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGIFNSHCFNSDHRSDYETFVRDLTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANA 680 LLE ++ L D S VR L L GL I + ++ Q+L+ ++ LDD D+ L A+ ++ + + DA + +LL+++VR+R S +++R + FG L+ G ++ FLEQ+ L L+LH+ D V ACR L+ P +E + +F H H + F+ + ++HFP + + +++ +++ W ++A A Sbjct: 1371 LLESLLYNLMARQKDTSARVRRLVLHGLANITLGSPDKVQTHSPQLLTAMIGGLDDGDDPHSLVALEAMVGLARLMDLVDAWDLHAVLLHIAVRIRPFFDSERMELRSVSIGLFGHLNKACRGDCKDVFLEQVVGGLVPLLLHLRDPHAPVVTACRFALRMCGPNLECEELAAVFQRH-LQEGHDLHFGEFLNTTCKHLMRHFPDLLGRLLSTSLFYYKSSWEDVRAAA 1598
BLAST of FC875305 vs. ExPASy Swiss-Prot
Match: HTR7A_HUMAN (HEAT repeat-containing protein 7A OS=Homo sapiens GN=HEATR7A PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.525e-13 Identity = 58/237 (24.47%), Postives = 108/237 (45.57%), Query Frame = 3 Query: 15 LLEQMVEALCRHVSDESPTVRGLCLRGLVQIPS---IHIHQYATQVLSVILALLDDLDES---VQLTAVSCLLTILKSSSKDAVEPILLNLSVRLRNLQVSMNVKMRRNAFAAFGALSNFGVGSQQEAFLEQIHAMLPRLILHIYDDDLSVRQACRNTLKQVAPFMEI-GVYGIFNSHCFNSDHRSDYETFVRDLTRQFVQHFPSRIDSYMGSTIQAFEAPWPIIQANAIYFSSSIL 704 LL+ ++E+L D +VR L LRGL + S + + Q+L+ ++ LDD D V L A+ L ++ + LL++++R+R S ++ R + FG L+ G ++ FL+Q+ L L+LH+ D +V ACR L+ P + + F H + F+ + + HFP + + + + F++ W ++A A F+ ++ Sbjct: 1360 LLDSLLESLAARQKDTCASVRRLVLRGLANLASGCPDKVRTHGPQLLTAMIGGLDDGDNPHSPVALEAMLGLARLVHLVESWDLRSGLLHVAIRIRPFFDSEKMEFRTASIRLFGHLNKVCHGDCEDVFLDQVVGGLAPLLLHLQDPQATVASACRFALRMCGPNLACEELSAAFQKH-LQEGRALHFGEFLNTTCKHLMHHFPDLLGRLLTTCLFYFKSSWENVRAAAPLFTGFLV 1595 The following BLAST results are available for this feature:
BLAST of FC875305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875305 ID=FC875305; Name=FC875305; organism=Citrus clementina; type=EST; length=742bpback to top |