FC875307

Overview
NameFC875307
Unique NameFC875307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A3_ARATH (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.674e-91
Identity = 162/181 (89.50%), Postives = 166/181 (91.71%), Query Frame = 3
Query:  150 MGANXXXXXXXXXXXEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            MGAN           EQISQLMQCKPLSE QV+ALCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDLAELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLV LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WKIFTDLFDYFPLTALVESEIFCLHGGLSP IE L
Sbjct:    1 MGANSLPTDATLDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETL 181          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A4_ARATH (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 1.396e-90
Identity = 161/181 (88.95%), Postives = 166/181 (91.71%), Query Frame = 3
Query:  150 MGANXXXXXXXXXXXEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            MGAN           EQISQLMQCKPLSE QV+ALCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDLAELF+IGG CPDTNYLFMGDYVDRGYYSVETVTLLVALK+RYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WKIFTDLFDYFPLTALVESEIFCLHGGLSP IE L
Sbjct:    1 MGANSIPTDATIDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVALKMRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETL 181          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A_MEDSA (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Medicago sativa GN=PP2A PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 2.381e-90
Identity = 161/181 (88.95%), Postives = 166/181 (91.71%), Query Frame = 3
Query:  150 MGANXXXXXXXXXXXEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            MGAN           EQISQLMQCKPLSE QVK LCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDLAELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG+AN+WKIFTDLFD+FPLTALVESEIFCLHGGLSP IE L
Sbjct:    1 MGANSMIADVTHDLNEQISQLMQCKPLSEQQVKELCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDFFPLTALVESEIFCLHGGLSPSIETL 181          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A5_TOBAC (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Nicotiana tabacum GN=NPP5 PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 3.438e-89
Identity = 156/166 (93.98%), Postives = 161/166 (96.99%), Query Frame = 3
Query:  195 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            EQISQLMQCKPLSEP V+ALCEKAKEIL EESNVQPVKSPVTICGDIHGQFHDLAELF+IGG+CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQR+TILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDYFPLTALVESEIFCLHGGLSP IE L
Sbjct:   17 EQISQLMQCKPLSEPDVRALCEKAKEILAEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGQCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETL 182          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A_TOBAC (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 4.491e-89
Identity = 156/166 (93.98%), Postives = 161/166 (96.99%), Query Frame = 3
Query:  195 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            EQI+QLMQCKPLSE +V+ LCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDYFPLTALVESEIFCLHGGLSP IE L
Sbjct:   15 EQIAQLMQCKPLSEQEVRGLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETL 180          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSJ (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 5.865e-89
Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 3
Query:  195 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            +QI +LMQCKPL EP+V+ALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDYFPLTALVESEIFCLHGGLSP IE L
Sbjct:   10 DQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETL 175          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSI (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A2 PE=2 SV=2)

HSP 1 Score: 327.02 bits (837), Expect = 5.865e-89
Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 3
Query:  195 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            +QI +LMQCKPL EP+V+ALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDYFPLTALVESEIFCLHGGLSP IE L
Sbjct:   10 DQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETL 175          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSJ (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 325.479 bits (833), Expect = 1.706e-88
Identity = 153/165 (92.73%), Postives = 161/165 (97.58%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QLM+C+PLSEP+VK LCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDL ELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG+AN+WKIFTDLFDYFPLTALVESEIFCLHGGLSP I++L
Sbjct:   18 QIEQLMECRPLSEPEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIDNL 182          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A_BRANA (Serine/threonine-protein phosphatase PP2A catalytic subunit (Fragment) OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 4.965e-88
Identity = 155/166 (93.37%), Postives = 159/166 (95.78%), Query Frame = 3
Query:  195 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            EQISQLMQCKPLSE QV+ALCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDLAELF+IGG CPDTNYLFMGDYVDRGYYSVETVTLLV LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALVESEIFCLHGGLSP IE L
Sbjct:   12 EQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVESEIFCLHGGLSPSIETL 177          
BLAST of FC875307 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSI (Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A4 PE=3 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.445e-87
Identity = 152/165 (92.12%), Postives = 160/165 (96.97%), Query Frame = 3
Query:  198 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPFIEHL 692
            QI QLM+C+PLSE +VK LCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDL ELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG+AN+WKIFTDLFDYFPLTALVESEIFCLHGGLSP I++L
Sbjct:   19 QIEQLMECRPLSETEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIDNL 183          
The following BLAST results are available for this feature:
BLAST of FC875307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2A3_ARATH3.674e-9189.50Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A4_ARATH1.396e-9088.95Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A_MEDSA2.381e-9088.95Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A5_TOBAC3.438e-8993.98Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2A_TOBAC4.491e-8993.98Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_ORYSJ5.865e-8993.37Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A2_ORYSI5.865e-8993.37Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A4_ORYSJ1.706e-8892.73Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A_BRANA4.965e-8893.37Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A4_ORYSI1.445e-8792.12Putative serine/threonine-protein phosphatase PP2A... [more]

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Properties
Property NameValue
Genbank descriptionC31402E05EF CTVClemen1 Citrus clementina cDNA clone C31402E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875307 ID=FC875307; Name=FC875307; organism=Citrus clementina; type=EST; length=698bp
GACGCGCGCTCTCATTTCGACTTCGTCGGCTCCGCTACACAAGACTGAAG
AATCACACAAACGAAACTCTCTGATCTCACTCTAGGGTTAGGGATATCCC
TAATCCGGACACCGTTATCCCGATTCGGTTTAGGATTCGAGAATCAAAGA
TGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGACGAGCAG
ATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGTTAAAGC
ATTATGCGAGAAGGCTAAGGAGATATTGATGGAAGAAAGCAATGTACAGC
CTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAGTTTCAT
GATCTTGCAGAACTTTTTCAAATTGGCGGGAAGTGTCCAGATACCAATTA
CTTGTTTATGGGAGATTATGTGGACCGTGGGTATTATTCTGTTGAAACAG
TTACGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCGGATCACTATT
CTTAGAGGAAACCATGAGAGTCGTCAGATTACTCAAGTTTATGGATTCTA
TGATGAATGTCTACGGAAGTATGGCAATGCTAACATTTGGAAGATTTTTA
CTGACCTTTTTGACTACTTTCCGTTGACTGCCTTGGTAGAGTCAGAAATA
TTCTGTCTGCATGGTGGGCTGTCCCCCTTCATTGAACACTTGATATAT
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