FC875321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.596e-45 Identity = 83/102 (81.37%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 331 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 +L AREAVNEVQVV DSSW+ LVI SE PVLV+FWAPWCGPCRMIAP I+ELAKEYAGK+ C+KLNTD+SPN ATKYGIRSIPTVLFFKNGE+K+S+IGAV Sbjct: 58 VLLHAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAV 159
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 6.212e-42 Identity = 89/172 (51.74%), Postives = 115/172 (66.86%), Query Frame = 1 Query: 133 MAMKNCFQVSSVYSTRAGVVQCY----QPFSSVKKIHLPISNGLNKXXXXXXXXXXXXXXXXXXXXXXXXILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 MA++NC Q+S+ S V+ + QP S K+++P GL + ++CKA EAV EVQ V DSSW+ V+ SE PV+V+FWAPWCGPC++IAP I+ELAKEY+GK+A +KLNTD++P IAT+Y IRSIPTVLFFKNGE+KESIIGAV Sbjct: 1 MAIENCLQLSTSASVGTVAVKSHVHHLQPSS---KVNVPTFRGLKRSFPALSSSVSSSSPRQFRYSS---VVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAV 166
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXM_ORYSJ (Thioredoxin M-type, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.769e-39 Identity = 72/100 (72.00%), Postives = 84/100 (84.00%), Query Frame = 1 Query: 337 CKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 C+ V+EV V + +W+++V+ SE PVLVEFWAPWCGPCRMIAP I+ELAKEY GK+ C K+NTDDSPNIAT YGIRSIPTVL FKNGEKKES+IGAV Sbjct: 58 CQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAV 157
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXM_MAIZE (Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.395e-39 Identity = 70/101 (69.31%), Postives = 87/101 (86.14%), Query Frame = 1 Query: 334 LCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 +C+++ AV+EV V + +W+ LV++ E PVLVEFWAPWCGPCRMIAP I+ELAK+YAGK+ C K+NTDDSPN+A+ YGIRSIPTVL FK GEKKES+IGAV Sbjct: 51 VCQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAV 151
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXM_WHEAT (Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.432e-38 Identity = 70/101 (69.31%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 334 LCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 +CK + V+EV V + +W+N+VI+ E+PVLVEFWAPWCGPCRMIAP I+ELAK+Y GK+ C K+NTDD PNIA+ YGIRSIPTVL FK+GEKKES+IGAV Sbjct: 60 VCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAV 160
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXM_BRANA (Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.991e-33 Identity = 58/102 (56.86%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 331 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 I+C+A++ + +V DS+WE+LV+ ++ PV+V+FWAPWCGPC+MI P + ELA++Y GK+ FKLNTDDSP KYG+RSIPT++ F GEKK++IIGAV Sbjct: 62 IICEAQDTATGIPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDSPATPGKYGVRSIPTIMIFVKGEKKDTIIGAV 163
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXM2_ARATH (Thioredoxin M-type 2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 8.991e-33 Identity = 56/102 (54.90%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 331 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 ++C+A+E ++QVV DS+W++LV+ + PV+V+FWAPWCGPC+MI P + +LA+ Y GK+ +KLNTD+SPN +YG+RSIPT++ F GEKK++IIGAV Sbjct: 71 VVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAV 172
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M-type 4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.003e-32 Identity = 63/105 (60.00%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 331 ILCKARE---AVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 I C+A++ A EV ++DS W+ V+ S+ PVLVEFWAPWCGPCRMI P +++LAK++AGK +K+NTD+SPN A +YGIRS+PTV+ FK GEKK+SIIGAV Sbjct: 74 IACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAV 178
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXM1_ARATH (Thioredoxin M-type 1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.214e-31 Identity = 55/102 (53.92%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 331 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 ++C+A++ + VV DS+W++LV+ ++ PV V+FWAPWCGPC+MI P + ELA++YAG+ +KLNTD+SP +YG+RSIPT++ F NGEKK++IIGAV Sbjct: 65 VICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDTIIGAV 166
BLAST of FC875321 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 9.304e-30 Identity = 56/92 (60.87%), Postives = 75/92 (81.52%), Query Frame = 1 Query: 361 EVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 636 E V D +++N+V+ S PVLV+FWAPWCGPCR+IAP ++E+A EY K+ C KLNTD+SPN+A++YGIRSIPT++ FK G+K E+IIGAV Sbjct: 35 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAV 126 The following BLAST results are available for this feature:
BLAST of FC875321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875321 ID=FC875321; Name=FC875321; organism=Citrus clementina; type=EST; length=758bpback to top |